RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 OR52N2Q8NGI0 321 aa4.77□□□□□ -1.65
HMGN3P1-201ENST00000453847 KCNN1Q92952 543 aa4.77□□□□□ -1.65
HMGN3P1-201ENST00000453847 MOGAT1Q96PD6 335 aa4.77□□□□□ -1.65
HMGN3P1-201ENST00000453847 DPYSL5Q9BPU6 564 aa4.77□□□□□ -1.65
HMGN3P1-201ENST00000453847 MECRQ9BV79 373 aa4.77□□□□□ -1.65
HMGN3P1-201ENST00000453847 ELAC1Q9H777 363 aaKnown RBP4.77□□□□□ -1.65
HMGN3P1-201ENST00000453847 SPON1Q9HCB6 807 aa4.77□□□□□ -1.65
HMGN3P1-201ENST00000453847 GBA2Q9HCG7 927 aaPredicted RBP4.77□□□□□ -1.65
HMGN3P1-201ENST00000453847 ZSCAN32Q9NX65 697 aa4.77□□□□□ -1.65
HMGN3P1-201ENST00000453847 TMOD4Q9NZQ9 345 aa4.77□□□□□ -1.65
HMGN3P1-201ENST00000453847 CDYLQ9Y232 598 aa4.77□□□□□ -1.65
HMGN3P1-201ENST00000453847 IRAK3Q9Y616 596 aa4.77□□□□□ -1.65
HMGN3P1-201ENST00000453847 PNMA6EA0A0J9YXQ4 647 aa4.76□□□□□ -1.65
HMGN3P1-201ENST00000453847 STX16-NPEPL1H3BU86 382 aa4.76□□□□□ -1.65
HMGN3P1-201ENST00000453847 STX16O14662 325 aa4.76□□□□□ -1.65
HMGN3P1-201ENST00000453847 CD3EAPO15446 510 aaKnown RBP4.76□□□□□ -1.65
HMGN3P1-201ENST00000453847 DOK2O60496 412 aa4.76□□□□□ -1.65
HMGN3P1-201ENST00000453847 B4GALT3O60512 393 aa4.76□□□□□ -1.65
HMGN3P1-201ENST00000453847 B4GALT4O60513 344 aa4.76□□□□□ -1.65
HMGN3P1-201ENST00000453847 SRGAP2O75044 1071 aa4.76□□□□□ -1.65
HMGN3P1-201ENST00000453847 CER1O95813 267 aa4.76□□□□□ -1.65
HMGN3P1-201ENST00000453847 KRT1P04264 644 aa4.76□□□□□ -1.65
HMGN3P1-201ENST00000453847 ATXN1LP0C7T5 689 aaKnown RBP4.76□□□□□ -1.65
HMGN3P1-201ENST00000453847 PI3P19957 117 aa4.76□□□□□ -1.65
HMGN3P1-201ENST00000453847 MAPK4P31152 587 aa4.76□□□□□ -1.65
HMGN3P1-201ENST00000453847 AKT1P31749 480 aa4.76□□□□□ -1.65
HMGN3P1-201ENST00000453847 GPS1Q13098 491 aa4.76□□□□□ -1.65
HMGN3P1-201ENST00000453847 KRT32Q14532 448 aa4.76□□□□□ -1.65
HMGN3P1-201ENST00000453847 TSTQ16762 297 aaKnown RBP4.76□□□□□ -1.65
HMGN3P1-201ENST00000453847 C1QL3Q5VWW1 255 aa4.76□□□□□ -1.65
HMGN3P1-201ENST00000453847 HAUS3Q68CZ6 603 aa4.76□□□□□ -1.65
HMGN3P1-201ENST00000453847 ITPRIPL1Q6GPH6 555 aa4.76□□□□□ -1.65
HMGN3P1-201ENST00000453847 MSANTD2Q6P1R3 559 aa4.76□□□□□ -1.65
HMGN3P1-201ENST00000453847 TMEM108Q6UXF1 575 aa4.76□□□□□ -1.65
HMGN3P1-201ENST00000453847 RASGRP2Q7LDG7 609 aa4.76□□□□□ -1.65
HMGN3P1-201ENST00000453847 GALNT5Q7Z7M9 940 aa4.76□□□□□ -1.65
HMGN3P1-201ENST00000453847 ELOA2Q8IYF1 753 aaPredicted RBP4.76□□□□□ -1.65
HMGN3P1-201ENST00000453847 OR8H2Q8N162 312 aa4.76□□□□□ -1.65
HMGN3P1-201ENST00000453847 TCP11L2Q8N4U5 519 aa4.76□□□□□ -1.65
HMGN3P1-201ENST00000453847 TDRD7Q8NHU6 1098 aaKnown RBP4.76□□□□□ -1.65
HMGN3P1-201ENST00000453847 TMEM171Q8WVE6 324 aa4.76□□□□□ -1.65
HMGN3P1-201ENST00000453847 C3orf49Q96BT1 292 aa4.76□□□□□ -1.65
HMGN3P1-201ENST00000453847 ZDHHC12Q96GR4 267 aa4.76□□□□□ -1.65
HMGN3P1-201ENST00000453847 LCORQ96JN0 433 aaPredicted RBP4.76□□□□□ -1.65
HMGN3P1-201ENST00000453847 C7orf26Q96N11 449 aa4.76□□□□□ -1.65
HMGN3P1-201ENST00000453847 WDR24Q96S15 920 aa4.76□□□□□ -1.65
HMGN3P1-201ENST00000453847 SMOQ99835 787 aa4.76□□□□□ -1.65
HMGN3P1-201ENST00000453847 CPPED1Q9BRF8 314 aaPredicted RBP4.76□□□□□ -1.65
HMGN3P1-201ENST00000453847 USP44Q9H0E7 712 aa4.76□□□□□ -1.65
HMGN3P1-201ENST00000453847 EPC1Q9H2F5 836 aa4.76□□□□□ -1.65
HMGN3P1-201ENST00000453847 IL21RQ9HBE5 538 aa4.76□□□□□ -1.65
HMGN3P1-201ENST00000453847 IRAK4Q9NWZ3 460 aa4.76□□□□□ -1.65
HMGN3P1-201ENST00000453847 PI4KBQ9UBF8 816 aa4.76□□□□□ -1.65
HMGN3P1-201ENST00000453847 DNAJB11Q9UBS4 358 aa4.76□□□□□ -1.65
HMGN3P1-201ENST00000453847 NDRG4Q9ULP0 352 aaKnown RBP4.76□□□□□ -1.65
HMGN3P1-201ENST00000453847 ARHGAP26Q9UNA1 814 aa4.76□□□□□ -1.65
HMGN3P1-201ENST00000453847 C19orf53Q9UNZ5 99 aaPredicted RBP4.76□□□□□ -1.65
HMGN3P1-201ENST00000453847 SHOC2Q9UQ13 582 aa4.76□□□□□ -1.65
HMGN3P1-201ENST00000453847 CNPY2Q9Y2B0 182 aa4.76□□□□□ -1.65
HMGN3P1-201ENST00000453847 SSX2IPQ9Y2D8 614 aa4.76□□□□□ -1.65
HMGN3P1-201ENST00000453847 DERAQ9Y315 318 aa4.76□□□□□ -1.65
HMGN3P1-201ENST00000453847 RAD54BQ9Y620 910 aa4.76□□□□□ -1.65
HMGN3P1-201ENST00000453847 CYP46A1Q9Y6A2 500 aa4.76□□□□□ -1.65
HMGN3P1-201ENST00000453847 VWA3AA6NCI4 1184 aa4.75□□□□□ -1.65
HMGN3P1-201ENST00000453847 PRR5-ARHGAP8B1AHC4 643 aa4.75□□□□□ -1.65
HMGN3P1-201ENST00000453847 KIF28PB7ZC32 967 aa4.75□□□□□ -1.65
HMGN3P1-201ENST00000453847 LEFTY2O00292 366 aa4.75□□□□□ -1.65
HMGN3P1-201ENST00000453847 RGS10O43665 173 aa4.75□□□□□ -1.65
HMGN3P1-201ENST00000453847 CCNT2O60583 730 aaKnown RBP4.75□□□□□ -1.65
HMGN3P1-201ENST00000453847 ZFPL1O95159 310 aa4.75□□□□□ -1.65
HMGN3P1-201ENST00000453847 LRPAP1P30533 357 aa4.75□□□□□ -1.65
HMGN3P1-201ENST00000453847 RAD52P43351 418 aa4.75□□□□□ -1.65
HMGN3P1-201ENST00000453847 PXNP49023 591 aaPredicted RBP4.75□□□□□ -1.65
HMGN3P1-201ENST00000453847 CDK7P50613 346 aa4.75□□□□□ -1.65
HMGN3P1-201ENST00000453847 JAG1P78504 1218 aa4.75□□□□□ -1.65
HMGN3P1-201ENST00000453847 SP2Q02086 613 aa4.75□□□□□ -1.65
HMGN3P1-201ENST00000453847 KRT17Q04695 432 aa4.75□□□□□ -1.65
HMGN3P1-201ENST00000453847 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.75□□□□□ -1.65
HMGN3P1-201ENST00000453847 MEA1Q16626 185 aa4.75□□□□□ -1.65
HMGN3P1-201ENST00000453847 FAM102AQ5T9C2 384 aaPredicted RBP4.75□□□□□ -1.65
HMGN3P1-201ENST00000453847 ATG16L1Q676U5 607 aa4.75□□□□□ -1.65
HMGN3P1-201ENST00000453847 SUN3Q8TAQ9 357 aa4.75□□□□□ -1.65
HMGN3P1-201ENST00000453847 GOLGA1Q92805 767 aa4.75□□□□□ -1.65
HMGN3P1-201ENST00000453847 DACT3Q96B18 629 aaPredicted RBP4.75□□□□□ -1.65
HMGN3P1-201ENST00000453847 GRAMD1AQ96CP6 724 aa4.75□□□□□ -1.65
HMGN3P1-201ENST00000453847 PHACTR3Q96KR7 559 aa4.75□□□□□ -1.65
HMGN3P1-201ENST00000453847 TREX2Q9BQ50 279 aaPredicted RBP4.75□□□□□ -1.65
HMGN3P1-201ENST00000453847 PTDSS2Q9BVG9 487 aa4.75□□□□□ -1.65
HMGN3P1-201ENST00000453847 HERC2P3Q9BVR0 1158 aa4.75□□□□□ -1.65
HMGN3P1-201ENST00000453847 C12orf65Q9H3J6 166 aaKnown RBP4.75□□□□□ -1.65
HMGN3P1-201ENST00000453847 PRKRIP1Q9H875 184 aaPredicted RBP4.75□□□□□ -1.65
HMGN3P1-201ENST00000453847 ANKEF1Q9NU02 776 aa4.75□□□□□ -1.65
HMGN3P1-201ENST00000453847 POGKQ9P215 609 aa4.75□□□□□ -1.65
HMGN3P1-201ENST00000453847 AATKQ6ZMQ8 1374 aa4.75□□□□□ -1.65
HMGN3P1-201ENST00000453847 CCDC195A0A1B0GUA6 201 aa4.74□□□□□ -1.65
HMGN3P1-201ENST00000453847 ANKRD18BA2A2Z9 1011 aa4.74□□□□□ -1.65
HMGN3P1-201ENST00000453847 SPTLC2O15270 562 aa4.74□□□□□ -1.65
HMGN3P1-201ENST00000453847 ZSCAN9O15535 394 aaPredicted RBP4.74□□□□□ -1.65
HMGN3P1-201ENST00000453847 RTN3O95197 1032 aaPredicted RBP4.74□□□□□ -1.65
HMGN3P1-201ENST00000453847 ERBB2P04626 1255 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms