RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 GARTP22102 1010 aa19.24■□□□□ 0.67
CHCHD3-203ENST00000448878 GAB4Q2WGN9 574 aa19.24■□□□□ 0.67
CHCHD3-203ENST00000448878 LARP1BQ659C4 914 aaKnown RBP19.24■□□□□ 0.67
CHCHD3-203ENST00000448878 SV2BQ7L1I2 683 aa19.24■□□□□ 0.67
CHCHD3-203ENST00000448878 DPH6Q7L8W6 267 aa19.24■□□□□ 0.67
CHCHD3-203ENST00000448878 CBWD1Q9BRT8 395 aa19.24■□□□□ 0.67
CHCHD3-203ENST00000448878 SEL1LQ9UBV2 794 aa19.24■□□□□ 0.67
CHCHD3-203ENST00000448878 MBD1Q9UIS9 605 aaPredicted RBP19.24■□□□□ 0.67
CHCHD3-203ENST00000448878 SIX4Q9UIU6 781 aa19.24■□□□□ 0.67
CHCHD3-203ENST00000448878 KLK13Q9UKR3 277 aa19.24■□□□□ 0.67
CHCHD3-203ENST00000448878 LHX6Q9UPM6 363 aa19.24■□□□□ 0.67
CHCHD3-203ENST00000448878 SMC3Q9UQE7 1217 aa19.24■□□□□ 0.67
CHCHD3-203ENST00000448878 ZNF840PA6NDX5 716 aa19.23■□□□□ 0.67
CHCHD3-203ENST00000448878 TRIM66O15016 1216 aa19.23■□□□□ 0.67
CHCHD3-203ENST00000448878 ADH1CP00326 375 aa19.23■□□□□ 0.67
CHCHD3-203ENST00000448878 MBL2P11226 248 aaPredicted RBP19.23■□□□□ 0.67
CHCHD3-203ENST00000448878 ADH5P11766 374 aa19.23■□□□□ 0.67
CHCHD3-203ENST00000448878 GAP43P17677 238 aa19.23■□□□□ 0.67
CHCHD3-203ENST00000448878 PFKLP17858 780 aa19.23■□□□□ 0.67
CHCHD3-203ENST00000448878 ITPKAP23677 461 aa19.23■□□□□ 0.67
CHCHD3-203ENST00000448878 RING1Q06587 406 aa19.23■□□□□ 0.67
CHCHD3-203ENST00000448878 MESP2Q0VG99 397 aa19.23■□□□□ 0.67
CHCHD3-203ENST00000448878 TDRD10Q5VZ19 366 aaKnown RBP19.23■□□□□ 0.67
CHCHD3-203ENST00000448878 RRAGBQ5VZM2 374 aa19.23■□□□□ 0.67
CHCHD3-203ENST00000448878 USP49Q70CQ1 688 aa19.23■□□□□ 0.67
CHCHD3-203ENST00000448878 C12orf40Q86WS4 652 aa19.23■□□□□ 0.67
CHCHD3-203ENST00000448878 NAT16Q8N8M0 369 aa19.23■□□□□ 0.67
CHCHD3-203ENST00000448878 TMX3Q96JJ7 454 aa19.23■□□□□ 0.67
CHCHD3-203ENST00000448878 STRA6Q9BX79 667 aa19.23■□□□□ 0.67
CHCHD3-203ENST00000448878 CRTAC1Q9NQ79 661 aa19.23■□□□□ 0.67
CHCHD3-203ENST00000448878 NEUROG3Q9Y4Z2 214 aa19.23■□□□□ 0.67
CHCHD3-203ENST00000448878 CEP295Q9C0D2 2601 aa19.23■□□□□ 0.67
CHCHD3-203ENST00000448878 HELZP42694 1942 aaKnown RBP19.23■□□□□ 0.67
CHCHD3-203ENST00000448878 TBC1D3BA6NDS4 549 aa19.22■□□□□ 0.67
CHCHD3-203ENST00000448878 F8VP50 259 aa19.22■□□□□ 0.67
CHCHD3-203ENST00000448878 AP5Z1O43299 807 aa19.22■□□□□ 0.67
CHCHD3-203ENST00000448878 GRIA2P42262 883 aa19.22■□□□□ 0.67
CHCHD3-203ENST00000448878 DPP6P42658 865 aa19.22■□□□□ 0.67
CHCHD3-203ENST00000448878 PPP3CCP48454 512 aa19.22■□□□□ 0.67
CHCHD3-203ENST00000448878 CASP5P51878 434 aa19.22■□□□□ 0.67
CHCHD3-203ENST00000448878 SLC7A9P82251 487 aa19.22■□□□□ 0.67
CHCHD3-203ENST00000448878 RPL6Q02878 288 aaKnown RBP19.22■□□□□ 0.67
CHCHD3-203ENST00000448878 GFPT1Q06210 699 aaPredicted RBP19.22■□□□□ 0.67
CHCHD3-203ENST00000448878 TAF10Q12962 218 aa19.22■□□□□ 0.67
CHCHD3-203ENST00000448878 ACAP1Q15027 740 aa19.22■□□□□ 0.67
CHCHD3-203ENST00000448878 HSF5Q4G112 596 aaPredicted RBP19.22■□□□□ 0.67
CHCHD3-203ENST00000448878 MDH1BQ5I0G3 518 aa19.22■□□□□ 0.67
CHCHD3-203ENST00000448878 BTBD8Q5XKL5 378 aa19.22■□□□□ 0.67
CHCHD3-203ENST00000448878 SLC23A3Q6PIS1 610 aa19.22■□□□□ 0.67
CHCHD3-203ENST00000448878 RHBDF2Q6PJF5 856 aa19.22■□□□□ 0.67
CHCHD3-203ENST00000448878 LRSAM1Q6UWE0 723 aa19.22■□□□□ 0.67
CHCHD3-203ENST00000448878 GPD1LQ8N335 351 aa19.22■□□□□ 0.67
CHCHD3-203ENST00000448878 CXorf38Q8TB03 319 aa19.22■□□□□ 0.67
CHCHD3-203ENST00000448878 KBTBD7Q8WVZ9 684 aa19.22■□□□□ 0.67
CHCHD3-203ENST00000448878 PCED1BQ96HM7 432 aa19.22■□□□□ 0.67
CHCHD3-203ENST00000448878 SLITRK1Q96PX8 696 aa19.22■□□□□ 0.67
CHCHD3-203ENST00000448878 SNX25Q9H3E2 840 aa19.22■□□□□ 0.67
CHCHD3-203ENST00000448878 STK17AQ9UEE5 414 aa19.22■□□□□ 0.67
CHCHD3-203ENST00000448878 ZBTB24O43167 697 aaPredicted RBP19.21■□□□□ 0.67
CHCHD3-203ENST00000448878 PRPF6O94906 941 aaKnown RBP19.21■□□□□ 0.67
CHCHD3-203ENST00000448878 TXLNAP40222 546 aa19.21■□□□□ 0.67
CHCHD3-203ENST00000448878 TNFRSF4P43489 277 aa19.21■□□□□ 0.67
CHCHD3-203ENST00000448878 DUOXA1Q1HG43 343 aa19.21■□□□□ 0.67
CHCHD3-203ENST00000448878 MAP7D1Q3KQU3 841 aa19.21■□□□□ 0.67
CHCHD3-203ENST00000448878 OR5B17Q8NGF7 314 aa19.21■□□□□ 0.67
CHCHD3-203ENST00000448878 OR6B3Q8NGW1 331 aa19.21■□□□□ 0.67
CHCHD3-203ENST00000448878 MYCBPAPQ8TBZ2 947 aa19.21■□□□□ 0.67
CHCHD3-203ENST00000448878 ERLEC1Q96DZ1 483 aa19.21■□□□□ 0.67
CHCHD3-203ENST00000448878 INTS13Q9NVM9 706 aa19.21■□□□□ 0.67
CHCHD3-203ENST00000448878 TBC1D14Q9P2M4 693 aa19.21■□□□□ 0.67
CHCHD3-203ENST00000448878 PILRBQ9UKJ0 227 aa19.21■□□□□ 0.67
CHCHD3-203ENST00000448878 SLC6A14Q9UN76 642 aa19.21■□□□□ 0.67
CHCHD3-203ENST00000448878 MSRB2Q9Y3D2 182 aa19.21■□□□□ 0.67
CHCHD3-203ENST00000448878 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.2■□□□□ 0.66
CHCHD3-203ENST00000448878 OPHN1O60890 802 aa19.2■□□□□ 0.66
CHCHD3-203ENST00000448878 GNL1P36915 607 aaPredicted RBP19.2■□□□□ 0.66
CHCHD3-203ENST00000448878 EIF2DP41214 584 aaKnown RBP19.2■□□□□ 0.66
CHCHD3-203ENST00000448878 WASP42768 502 aa19.2■□□□□ 0.66
CHCHD3-203ENST00000448878 KIR2DL1P43626 348 aaPredicted RBP19.2■□□□□ 0.66
CHCHD3-203ENST00000448878 GAD2Q05329 585 aa19.2■□□□□ 0.66
CHCHD3-203ENST00000448878 RABEP1Q15276 862 aa19.2■□□□□ 0.66
CHCHD3-203ENST00000448878 DUOXA2Q1HG44 320 aa19.2■□□□□ 0.66
CHCHD3-203ENST00000448878 LY6G5CQ5SRR4 150 aa19.2■□□□□ 0.66
CHCHD3-203ENST00000448878 DDX42Q86XP3 938 aaKnown RBP eCLIP19.2■□□□□ 0.66
CHCHD3-203ENST00000448878 CHCHD4Q8N4Q1 142 aa19.2■□□□□ 0.66
CHCHD3-203ENST00000448878 SPRYD3Q8NCJ5 442 aa19.2■□□□□ 0.66
CHCHD3-203ENST00000448878 CEP76Q8TAP6 659 aa19.2■□□□□ 0.66
CHCHD3-203ENST00000448878 DNAJC19Q96DA6 116 aa19.2■□□□□ 0.66
CHCHD3-203ENST00000448878 CEP295NLQ96MC4 621 aa19.2■□□□□ 0.66
CHCHD3-203ENST00000448878 PANK2Q9BZ23 570 aa19.2■□□□□ 0.66
CHCHD3-203ENST00000448878 PANK4Q9NVE7 773 aa19.2■□□□□ 0.66
CHCHD3-203ENST00000448878 ZNF233A6NK53 670 aa19.19■□□□□ 0.66
CHCHD3-203ENST00000448878 ADAM23O75077 832 aa19.19■□□□□ 0.66
CHCHD3-203ENST00000448878 WARSP23381 471 aaKnown RBP19.19■□□□□ 0.66
CHCHD3-203ENST00000448878 NOP14P78316 857 aaKnown RBP19.19■□□□□ 0.66
CHCHD3-203ENST00000448878 SEMA3BQ13214 749 aa19.19■□□□□ 0.66
CHCHD3-203ENST00000448878 ALCAMQ13740 583 aa19.19■□□□□ 0.66
CHCHD3-203ENST00000448878 SURF1Q15526 300 aa19.19■□□□□ 0.66
CHCHD3-203ENST00000448878 ANO4Q32M45 955 aa19.19■□□□□ 0.66
CHCHD3-203ENST00000448878 SPDYCQ5MJ68 293 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms