RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 CALM3P0DP25 149 aa11.17□□□□□ -0.62
LINC00342-202ENST00000448494 CPA2P48052 419 aa11.17□□□□□ -0.62
LINC00342-202ENST00000448494 ERFP50548 548 aa11.17□□□□□ -0.62
LINC00342-202ENST00000448494 MLLT6P55198 1093 aaPredicted RBP11.17□□□□□ -0.62
LINC00342-202ENST00000448494 CAV1Q03135 178 aa11.17□□□□□ -0.62
LINC00342-202ENST00000448494 TFCP2Q12800 502 aa11.17□□□□□ -0.62
LINC00342-202ENST00000448494 TMED2Q15363 201 aa11.17□□□□□ -0.62
LINC00342-202ENST00000448494 CYP1B1Q16678 543 aa11.17□□□□□ -0.62
LINC00342-202ENST00000448494 PTPROQ16827 1216 aa11.17□□□□□ -0.62
LINC00342-202ENST00000448494 CAVIN4Q5BKX8 364 aa11.17□□□□□ -0.62
LINC00342-202ENST00000448494 RABGAP1LQ5R372 815 aa11.17□□□□□ -0.62
LINC00342-202ENST00000448494 PPM1LQ5SGD2 360 aa11.17□□□□□ -0.62
LINC00342-202ENST00000448494 ARL6IP4Q66PJ3 421 aaKnown RBP11.17□□□□□ -0.62
LINC00342-202ENST00000448494 CENPPQ6IPU0 288 aa11.17□□□□□ -0.62
LINC00342-202ENST00000448494 GLRX5Q86SX6 157 aa11.17□□□□□ -0.62
LINC00342-202ENST00000448494 IGFN1Q86VF2 1251 aa11.17□□□□□ -0.62
LINC00342-202ENST00000448494 PQLC1Q8N2U9 271 aa11.17□□□□□ -0.62
LINC00342-202ENST00000448494 TRIB2Q92519 343 aa11.17□□□□□ -0.62
LINC00342-202ENST00000448494 TRIM63Q969Q1 353 aa11.17□□□□□ -0.62
LINC00342-202ENST00000448494 EEF2KMTQ96G04 330 aa11.17□□□□□ -0.62
LINC00342-202ENST00000448494 OR2B2Q9GZK3 357 aa11.17□□□□□ -0.62
LINC00342-202ENST00000448494 EHMT1Q9H9B1 1298 aa11.17□□□□□ -0.62
LINC00342-202ENST00000448494 C8orf4Q9NR00 106 aa11.17□□□□□ -0.62
LINC00342-202ENST00000448494 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.17□□□□□ -0.62
LINC00342-202ENST00000448494 KBTBD4Q9NVX7 518 aa11.17□□□□□ -0.62
LINC00342-202ENST00000448494 NAGPAQ9UK23 515 aa11.17□□□□□ -0.62
LINC00342-202ENST00000448494 NENFQ9UMX5 172 aa11.17□□□□□ -0.62
LINC00342-202ENST00000448494 SOX13Q9UN79 622 aa11.17□□□□□ -0.62
LINC00342-202ENST00000448494 PSMD13Q9UNM6 376 aa11.17□□□□□ -0.62
LINC00342-202ENST00000448494 COMMD10Q9Y6G5 202 aa11.17□□□□□ -0.62
LINC00342-202ENST00000448494 FLT1P17948 1338 aa11.16□□□□□ -0.62
LINC00342-202ENST00000448494 J3QRK9 145 aa11.16□□□□□ -0.62
LINC00342-202ENST00000448494 PEX14O75381 377 aa11.16□□□□□ -0.62
LINC00342-202ENST00000448494 ENO1P06733 434 aaKnown RBP11.16□□□□□ -0.62
LINC00342-202ENST00000448494 ABHD2P08910 425 aa11.16□□□□□ -0.62
LINC00342-202ENST00000448494 H2AFZP0C0S5 128 aa11.16□□□□□ -0.62
LINC00342-202ENST00000448494 ITIH2P19823 946 aa11.16□□□□□ -0.62
LINC00342-202ENST00000448494 NR4A1P22736 598 aa11.16□□□□□ -0.62
LINC00342-202ENST00000448494 CA4P22748 312 aa11.16□□□□□ -0.62
LINC00342-202ENST00000448494 RPA3P35244 121 aaPredicted RBP11.16□□□□□ -0.62
LINC00342-202ENST00000448494 ZAP70P43403 619 aa11.16□□□□□ -0.62
LINC00342-202ENST00000448494 CBX5P45973 191 aa11.16□□□□□ -0.62
LINC00342-202ENST00000448494 PEX3P56589 373 aa11.16□□□□□ -0.62
LINC00342-202ENST00000448494 PTK2Q05397 1052 aa11.16□□□□□ -0.62
LINC00342-202ENST00000448494 ZNF174Q15697 407 aa11.16□□□□□ -0.62
LINC00342-202ENST00000448494 SLC1A5Q15758 541 aa11.16□□□□□ -0.62
LINC00342-202ENST00000448494 NAALADL2Q58DX5 795 aa11.16□□□□□ -0.62
LINC00342-202ENST00000448494 PLEKHA7Q6IQ23 1121 aa11.16□□□□□ -0.62
LINC00342-202ENST00000448494 CCDC137Q6PK04 289 aaKnown RBP11.16□□□□□ -0.62
LINC00342-202ENST00000448494 H2AFVQ71UI9 128 aa11.16□□□□□ -0.62
LINC00342-202ENST00000448494 HAUS6Q7Z4H7 955 aa11.16□□□□□ -0.62
LINC00342-202ENST00000448494 TICAM1Q8IUC6 712 aa11.16□□□□□ -0.62
LINC00342-202ENST00000448494 CCDC105Q8IYK2 499 aa11.16□□□□□ -0.62
LINC00342-202ENST00000448494 ANKRD13AQ8IZ07 590 aa11.16□□□□□ -0.62
LINC00342-202ENST00000448494 LILRB2Q8N423 598 aa11.16□□□□□ -0.62
LINC00342-202ENST00000448494 PRELID2Q8N945 189 aa11.16□□□□□ -0.62
LINC00342-202ENST00000448494 PDPRQ8NCN5 879 aa11.16□□□□□ -0.62
LINC00342-202ENST00000448494 FBXO27Q8NI29 283 aa11.16□□□□□ -0.62
LINC00342-202ENST00000448494 AFG1LQ8WV93 481 aa11.16□□□□□ -0.62
LINC00342-202ENST00000448494 HSPH1Q92598 858 aa11.16□□□□□ -0.62
LINC00342-202ENST00000448494 OSBP2Q969R2 916 aa11.16□□□□□ -0.62
LINC00342-202ENST00000448494 TP53INP1Q96A56 240 aa11.16□□□□□ -0.62
LINC00342-202ENST00000448494 FBXL8Q96CD0 374 aa11.16□□□□□ -0.62
LINC00342-202ENST00000448494 ERLEC1Q96DZ1 483 aa11.16□□□□□ -0.62
LINC00342-202ENST00000448494 TXNDC15Q96J42 360 aa11.16□□□□□ -0.62
LINC00342-202ENST00000448494 CSRNP1Q96S65 589 aa11.16□□□□□ -0.62
LINC00342-202ENST00000448494 HERC2P3Q9BVR0 1158 aa11.16□□□□□ -0.62
LINC00342-202ENST00000448494 SMARCAD1Q9H4L7 1026 aa11.16□□□□□ -0.62
LINC00342-202ENST00000448494 RPF2Q9H7B2 306 aaKnown RBP11.16□□□□□ -0.62
LINC00342-202ENST00000448494 PCDH12Q9NPG4 1184 aa11.16□□□□□ -0.62
LINC00342-202ENST00000448494 GDAP2Q9NXN4 497 aa11.16□□□□□ -0.62
LINC00342-202ENST00000448494 NINJ2Q9NZG7 142 aa11.16□□□□□ -0.62
LINC00342-202ENST00000448494 AMOTL2Q9Y2J4 779 aa11.16□□□□□ -0.62
LINC00342-202ENST00000448494 MAP3K2Q9Y2U5 619 aa11.16□□□□□ -0.62
LINC00342-202ENST00000448494 CORINQ9Y5Q5 1042 aa11.16□□□□□ -0.62
LINC00342-202ENST00000448494 PHRF1Q9P1Y6 1649 aaKnown RBP11.16□□□□□ -0.62
LINC00342-202ENST00000448494 A0A087WZG4 1122 aa11.16□□□□□ -0.62
LINC00342-202ENST00000448494 WDR91A4D1P6 747 aa11.16□□□□□ -0.62
LINC00342-202ENST00000448494 H3BNH8 94 aa11.16□□□□□ -0.62
LINC00342-202ENST00000448494 CCRL2O00421 344 aa11.16□□□□□ -0.62
LINC00342-202ENST00000448494 CYP26A1O43174 497 aa11.16□□□□□ -0.62
LINC00342-202ENST00000448494 ATE1O95260 518 aa11.16□□□□□ -0.62
LINC00342-202ENST00000448494 GSTM1P09488 218 aa11.16□□□□□ -0.62
LINC00342-202ENST00000448494 DLDP09622 509 aaKnown RBP11.16□□□□□ -0.62
LINC00342-202ENST00000448494 FGFR1P11362 822 aa11.16□□□□□ -0.62
LINC00342-202ENST00000448494 PSMC3P17980 439 aa11.16□□□□□ -0.62
LINC00342-202ENST00000448494 PLCG1P19174 1290 aa11.16□□□□□ -0.62
LINC00342-202ENST00000448494 PIK3CAP42336 1068 aa11.16□□□□□ -0.62
LINC00342-202ENST00000448494 TRAPPC10P48553 1259 aa11.16□□□□□ -0.62
LINC00342-202ENST00000448494 ANKRD26P1Q6NSI1 321 aa11.16□□□□□ -0.62
LINC00342-202ENST00000448494 TTC27Q6P3X3 843 aa11.16□□□□□ -0.62
LINC00342-202ENST00000448494 ALKBH5Q6P6C2 394 aaKnown RBP11.16□□□□□ -0.62
LINC00342-202ENST00000448494 FOXR2Q6PJQ5 311 aa11.16□□□□□ -0.62
LINC00342-202ENST00000448494 KSR2Q6VAB6 950 aa11.16□□□□□ -0.62
LINC00342-202ENST00000448494 SETD3Q86TU7 594 aaPredicted RBP11.16□□□□□ -0.62
LINC00342-202ENST00000448494 AKAP14Q86UN6 197 aa11.16□□□□□ -0.62
LINC00342-202ENST00000448494 RELL1Q8IUW5 271 aa11.16□□□□□ -0.62
LINC00342-202ENST00000448494 ZNF341Q9BYN7 854 aa11.16□□□□□ -0.62
LINC00342-202ENST00000448494 NMUR2Q9GZQ4 415 aa11.16□□□□□ -0.62
LINC00342-202ENST00000448494 SERHL2Q9H4I8 314 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms