RNA–Protein interactions for RNA: ENST00000434425.5

RFC3-202, Transcript of replication factor C subunit 3, humanhuman

TSL 5 BASIC

Gene RFC3, Length 1,461 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-202ENST00000434425 CDK4P11802 303 aa5.84□□□□□ -1.47
RFC3-202ENST00000434425 HNRNPLP14866 589 aaKnown RBP eCLIP5.84□□□□□ -1.475e-7■□□□□ 10.8
RFC3-202ENST00000434425 PORP16435 677 aaPredicted RBP5.84□□□□□ -1.47
RFC3-202ENST00000434425 GDI1P31150 447 aa5.84□□□□□ -1.47
RFC3-202ENST00000434425 BMP8BP34820 402 aa5.84□□□□□ -1.47
RFC3-202ENST00000434425 GPC1P35052 558 aa5.84□□□□□ -1.47
RFC3-202ENST00000434425 HNF1BP35680 557 aa5.84□□□□□ -1.47
RFC3-202ENST00000434425 KRT2P35908 639 aa5.84□□□□□ -1.47
RFC3-202ENST00000434425 ID4P47928 161 aa5.84□□□□□ -1.47
RFC3-202ENST00000434425 RNF144AP50876 292 aaPredicted RBP5.84□□□□□ -1.47
RFC3-202ENST00000434425 CLCN4P51793 760 aa5.84□□□□□ -1.47
RFC3-202ENST00000434425 AFF3P51826 1226 aaKnown RBP5.84□□□□□ -1.47
RFC3-202ENST00000434425 DSTNP60981 165 aa5.84□□□□□ -1.47
RFC3-202ENST00000434425 NKX3-2P78367 333 aa5.84□□□□□ -1.47
RFC3-202ENST00000434425 MRPS15P82914 257 aaKnown RBP5.84□□□□□ -1.47
RFC3-202ENST00000434425 CYP4F8P98187 520 aa5.84□□□□□ -1.47
RFC3-202ENST00000434425 CDK17Q00537 523 aa5.84□□□□□ -1.47
RFC3-202ENST00000434425 INSM1Q01101 510 aaPredicted RBP5.84□□□□□ -1.47
RFC3-202ENST00000434425 C19orf57Q0VDD7 668 aa5.84□□□□□ -1.47
RFC3-202ENST00000434425 LRP8Q14114 963 aa5.84□□□□□ -1.47
RFC3-202ENST00000434425 KRT32Q14532 448 aa5.84□□□□□ -1.47
RFC3-202ENST00000434425 CYP27C1Q4G0S4 372 aa5.84□□□□□ -1.47
RFC3-202ENST00000434425 HS1BP3Q53T59 392 aa5.84□□□□□ -1.47
RFC3-202ENST00000434425 NOL9Q5SY16 702 aaKnown RBP5.84□□□□□ -1.47
RFC3-202ENST00000434425 CYP4A22Q5TCH4 519 aa5.84□□□□□ -1.47
RFC3-202ENST00000434425 CENPPQ6IPU0 288 aa5.84□□□□□ -1.47
RFC3-202ENST00000434425 NEK5Q6P3R8 708 aa5.84□□□□□ -1.47
RFC3-202ENST00000434425 CAND1Q86VP6 1230 aaKnown RBP5.84□□□□□ -1.47
RFC3-202ENST00000434425 TREML1Q86YW5 311 aa5.84□□□□□ -1.47
RFC3-202ENST00000434425 KRT78Q8N1N4 520 aa5.84□□□□□ -1.47
RFC3-202ENST00000434425 RNF10Q8N5U6 811 aaKnown RBP5.84□□□□□ -1.47
RFC3-202ENST00000434425 CCDC110Q8TBZ0 833 aa5.84□□□□□ -1.47
RFC3-202ENST00000434425 RHPN1Q8TCX5 695 aa5.84□□□□□ -1.47
RFC3-202ENST00000434425 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.84□□□□□ -1.47
RFC3-202ENST00000434425 PIBF1Q8WXW3 757 aa5.84□□□□□ -1.47
RFC3-202ENST00000434425 SEPT1Q8WYJ6 367 aa5.84□□□□□ -1.47
RFC3-202ENST00000434425 RAPGEF5Q92565 580 aa5.84□□□□□ -1.47
RFC3-202ENST00000434425 NCLNQ969V3 563 aa5.84□□□□□ -1.47
RFC3-202ENST00000434425 TMX3Q96JJ7 454 aa5.84□□□□□ -1.47
RFC3-202ENST00000434425 ART5Q96L15 291 aa5.84□□□□□ -1.47
RFC3-202ENST00000434425 TTC25Q96NG3 672 aa5.84□□□□□ -1.47
RFC3-202ENST00000434425 PARK7Q99497 189 aaKnown RBP5.84□□□□□ -1.47
RFC3-202ENST00000434425 GDF15Q99988 308 aa5.84□□□□□ -1.47
RFC3-202ENST00000434425 BCL7BQ9BQE9 202 aa5.84□□□□□ -1.47
RFC3-202ENST00000434425 TSEN34Q9BSV6 310 aaKnown RBP5.84□□□□□ -1.47
RFC3-202ENST00000434425 MRPL4Q9BYD3 311 aaKnown RBP5.84□□□□□ -1.47
RFC3-202ENST00000434425 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.84□□□□□ -1.47
RFC3-202ENST00000434425 PSTPIP2Q9H939 334 aa5.84□□□□□ -1.47
RFC3-202ENST00000434425 PAK6Q9NQU5 681 aaPredicted RBP5.84□□□□□ -1.47
RFC3-202ENST00000434425 SDHAF3Q9NRP4 125 aa5.84□□□□□ -1.47
RFC3-202ENST00000434425 SPATS2LQ9NUQ6 558 aaKnown RBP5.84□□□□□ -1.47
RFC3-202ENST00000434425 ACTR3BQ9P1U1 418 aa5.84□□□□□ -1.47
RFC3-202ENST00000434425 SUCLA2Q9P2R7 463 aaPredicted RBP5.84□□□□□ -1.47
RFC3-202ENST00000434425 BAG5Q9UL15 447 aa5.84□□□□□ -1.47
RFC3-202ENST00000434425 MYH2Q9UKX2 1941 aa5.84□□□□□ -1.47
RFC3-202ENST00000434425 MYH13Q9UKX3 1938 aa5.84□□□□□ -1.47
RFC3-202ENST00000434425 PHIPQ8WWQ0 1821 aa5.84□□□□□ -1.47
RFC3-202ENST00000434425 RPAP1Q9BWH6 1393 aaPredicted RBP5.84□□□□□ -1.48
RFC3-202ENST00000434425 A0A0G2JLL6 359 aaPredicted RBP5.83□□□□□ -1.48
RFC3-202ENST00000434425 CAPN14A8MX76 684 aa5.83□□□□□ -1.48
RFC3-202ENST00000434425 PDLIM1O00151 329 aa5.83□□□□□ -1.48
RFC3-202ENST00000434425 E2F3O00716 465 aa5.83□□□□□ -1.48
RFC3-202ENST00000434425 TNPO2O14787 897 aaKnown RBP5.83□□□□□ -1.48
RFC3-202ENST00000434425 SPINT1O43278 529 aa5.83□□□□□ -1.48
RFC3-202ENST00000434425 EXTL3O43909 919 aa5.83□□□□□ -1.48
RFC3-202ENST00000434425 KERAO60938 352 aa5.83□□□□□ -1.48
RFC3-202ENST00000434425 EFCAB14O75071 495 aa5.83□□□□□ -1.48
RFC3-202ENST00000434425 MBD3O95983 291 aa5.83□□□□□ -1.48
RFC3-202ENST00000434425 CHRNA1P02708 482 aa5.83□□□□□ -1.48
RFC3-202ENST00000434425 ZFYP08048 801 aaPredicted RBP5.83□□□□□ -1.48
RFC3-202ENST00000434425 NR2F1P10589 423 aa5.83□□□□□ -1.48
RFC3-202ENST00000434425 SYN1P17600 705 aa5.83□□□□□ -1.48
RFC3-202ENST00000434425 PTPRAP18433 802 aa5.83□□□□□ -1.48
RFC3-202ENST00000434425 FGFR2P21802 821 aa5.83□□□□□ -1.48
RFC3-202ENST00000434425 KCNA5P22460 613 aa5.83□□□□□ -1.48
RFC3-202ENST00000434425 CCND1P24385 295 aa5.83□□□□□ -1.48
RFC3-202ENST00000434425 PRDX5P30044 214 aa5.83□□□□□ -1.48
RFC3-202ENST00000434425 ADSSP30520 456 aa5.83□□□□□ -1.48
RFC3-202ENST00000434425 ACAA2P42765 397 aaKnown RBP5.83□□□□□ -1.48
RFC3-202ENST00000434425 DIO1P49895 249 aa5.83□□□□□ -1.48
RFC3-202ENST00000434425 PSMD7P51665 324 aa5.83□□□□□ -1.48
RFC3-202ENST00000434425 NEK4P51957 841 aa5.83□□□□□ -1.48
RFC3-202ENST00000434425 HAND2P61296 217 aa5.83□□□□□ -1.48
RFC3-202ENST00000434425 NRG1Q02297 640 aaPredicted RBP5.83□□□□□ -1.48
RFC3-202ENST00000434425 ACTN3Q08043 901 aaPredicted RBP5.83□□□□□ -1.48
RFC3-202ENST00000434425 POU4F2Q12837 409 aa5.83□□□□□ -1.48
RFC3-202ENST00000434425 BYSLQ13895 437 aaKnown RBP5.83□□□□□ -1.48
RFC3-202ENST00000434425 DOC2AQ14183 400 aa5.83□□□□□ -1.48
RFC3-202ENST00000434425 ADIPOQQ15848 244 aa5.83□□□□□ -1.48
RFC3-202ENST00000434425 SLC39A12Q504Y0 691 aa5.83□□□□□ -1.48
RFC3-202ENST00000434425 XKR3Q5GH77 459 aa5.83□□□□□ -1.48
RFC3-202ENST00000434425 FYB2Q5VWT5 728 aa5.83□□□□□ -1.48
RFC3-202ENST00000434425 GADL1Q6ZQY3 521 aa5.83□□□□□ -1.48
RFC3-202ENST00000434425 PRRT2Q7Z6L0 340 aaPredicted RBP5.83□□□□□ -1.48
RFC3-202ENST00000434425 PRPF39Q86UA1 669 aaKnown RBP5.83□□□□□ -1.48
RFC3-202ENST00000434425 PTRH1Q86Y79 214 aaKnown RBP5.83□□□□□ -1.48
RFC3-202ENST00000434425 SPARTQ8N0X7 666 aa5.83□□□□□ -1.48
RFC3-202ENST00000434425 ZGPATQ8N5A5 531 aaKnown RBP5.83□□□□□ -1.48
RFC3-202ENST00000434425 ANKRD13CQ8N6S4 541 aa5.83□□□□□ -1.48
RFC3-202ENST00000434425 NIPA2Q8N8Q9 360 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms