RNA–Protein interactions for RNA: ENST00000421462.5

PKP4-204, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 3,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-204ENST00000421462 MSX2P35548 267 aaPredicted RBP17.34■□□□□ 0.37
PKP4-204ENST00000421462 CDKN2BP42772 138 aa17.34■□□□□ 0.37
PKP4-204ENST00000421462 PLEKHA7Q6IQ23 1121 aa17.34■□□□□ 0.37
PKP4-204ENST00000421462 C16orf46Q6P387 395 aa17.34■□□□□ 0.37
PKP4-204ENST00000421462 IYDQ6PHW0 289 aa17.34■□□□□ 0.37
PKP4-204ENST00000421462 NPNTQ6UXI9 565 aa17.34■□□□□ 0.37
PKP4-204ENST00000421462 USP37Q86T82 979 aa17.34■□□□□ 0.37
PKP4-204ENST00000421462 C12orf56Q8IXR9 622 aa17.34■□□□□ 0.37
PKP4-204ENST00000421462 GPD1LQ8N335 351 aa17.34■□□□□ 0.37
PKP4-204ENST00000421462 EMC1Q8N766 993 aa17.34■□□□□ 0.37
PKP4-204ENST00000421462 GRIP2Q9C0E4 1043 aa17.34■□□□□ 0.37
PKP4-204ENST00000421462 APOBEC3GQ9HC16 384 aaKnown RBP17.34■□□□□ 0.37
PKP4-204ENST00000421462 STK32BQ9NY57 414 aa17.34■□□□□ 0.37
PKP4-204ENST00000421462 PCDHGB4Q9UN71 923 aa17.34■□□□□ 0.37
PKP4-204ENST00000421462 PHF24Q9UPV7 400 aa17.34■□□□□ 0.37
PKP4-204ENST00000421462 FARP1Q9Y4F1 1045 aaPredicted RBP17.34■□□□□ 0.37
PKP4-204ENST00000421462 PCDHGB5Q9Y5G0 923 aa17.34■□□□□ 0.37
PKP4-204ENST00000421462 AK5Q9Y6K8 562 aa17.34■□□□□ 0.37
PKP4-204ENST00000421462 TRPA1O75762 1119 aa17.33■□□□□ 0.37
PKP4-204ENST00000421462 SERPINB2P05120 415 aa17.33■□□□□ 0.37
PKP4-204ENST00000421462 VIL1P09327 827 aaKnown RBP17.33■□□□□ 0.37
PKP4-204ENST00000421462 RAG1P15918 1043 aa17.33■□□□□ 0.37
PKP4-204ENST00000421462 NCF2P19878 526 aaPredicted RBP17.33■□□□□ 0.37
PKP4-204ENST00000421462 BPIFB4P59827 614 aa17.33■□□□□ 0.37
PKP4-204ENST00000421462 MSLNQ13421 630 aaPredicted RBP17.33■□□□□ 0.37
PKP4-204ENST00000421462 DLGAP5Q15398 846 aa17.33■□□□□ 0.37
PKP4-204ENST00000421462 TAF5Q15542 800 aa17.33■□□□□ 0.37
PKP4-204ENST00000421462 DNAL1Q4LDG9 190 aa17.33■□□□□ 0.37
PKP4-204ENST00000421462 TDRD10Q5VZ19 366 aaKnown RBP17.33■□□□□ 0.37
PKP4-204ENST00000421462 ACAD11Q709F0 780 aa17.33■□□□□ 0.37
PKP4-204ENST00000421462 PDSS2Q86YH6 399 aa17.33■□□□□ 0.37
PKP4-204ENST00000421462 HPS6Q86YV9 775 aa17.33■□□□□ 0.37
PKP4-204ENST00000421462 NAT8LQ8N9F0 302 aa17.33■□□□□ 0.37
PKP4-204ENST00000421462 KLHL23Q8NBE8 558 aa17.33■□□□□ 0.37
PKP4-204ENST00000421462 KLHL4Q9C0H6 718 aa17.33■□□□□ 0.37
PKP4-204ENST00000421462 PTPRJQ12913 1337 aa17.33■□□□□ 0.36
PKP4-204ENST00000421462 A0A088AWK7 358 aa17.33■□□□□ 0.36
PKP4-204ENST00000421462 TGDSO95455 350 aa17.33■□□□□ 0.36
PKP4-204ENST00000421462 ITGAVP06756 1048 aa17.33■□□□□ 0.36
PKP4-204ENST00000421462 PABPC1LQ4VXU2 614 aaKnown RBP17.33■□□□□ 0.36
PKP4-204ENST00000421462 SCARA5Q6ZMJ2 495 aa17.33■□□□□ 0.36
PKP4-204ENST00000421462 LARGE2Q8N3Y3 721 aa17.33■□□□□ 0.36
PKP4-204ENST00000421462 GMCL1Q96IK5 515 aa17.33■□□□□ 0.36
PKP4-204ENST00000421462 EHMT1Q9H9B1 1298 aa17.33■□□□□ 0.36
PKP4-204ENST00000421462 SSU72Q9NP77 194 aaKnown RBP17.33■□□□□ 0.36
PKP4-204ENST00000421462 KCNK4Q9NYG8 393 aa17.33■□□□□ 0.36
PKP4-204ENST00000421462 UQCRBP14927 111 aa17.32■□□□□ 0.36
PKP4-204ENST00000421462 AOC3Q16853 763 aa17.32■□□□□ 0.36
PKP4-204ENST00000421462 CCDC33Q8N5R6 958 aa17.32■□□□□ 0.36
PKP4-204ENST00000421462 AGR3Q8TD06 166 aa17.32■□□□□ 0.36
PKP4-204ENST00000421462 FAM172AQ8WUF8 416 aa17.32■□□□□ 0.36
PKP4-204ENST00000421462 ZNF606Q8WXB4 792 aa17.32■□□□□ 0.36
PKP4-204ENST00000421462 ZBTB45Q96K62 511 aaPredicted RBP17.32■□□□□ 0.36
PKP4-204ENST00000421462 FAM210AQ96ND0 272 aa17.32■□□□□ 0.36
PKP4-204ENST00000421462 SLC9A2Q9UBY0 812 aa17.32■□□□□ 0.36
PKP4-204ENST00000421462 TJP2Q9UDY2 1190 aa17.32■□□□□ 0.36
PKP4-204ENST00000421462 SOX13Q9UN79 622 aa17.32■□□□□ 0.36
PKP4-204ENST00000421462 MAD1L1Q9Y6D9 718 aa17.32■□□□□ 0.36
PKP4-204ENST00000421462 ITGA2BP08514 1039 aa17.32■□□□□ 0.36
PKP4-204ENST00000421462 RBP3P10745 1247 aa17.32■□□□□ 0.36
PKP4-204ENST00000421462 PSMA2P25787 234 aa17.32■□□□□ 0.36
PKP4-204ENST00000421462 NLRP11P59045 1033 aaKnown RBP17.32■□□□□ 0.36
PKP4-204ENST00000421462 EIF3EP60228 445 aaKnown RBP17.32■□□□□ 0.36
PKP4-204ENST00000421462 CUL2Q13617 745 aa17.32■□□□□ 0.36
PKP4-204ENST00000421462 LCA5Q86VQ0 697 aa17.32■□□□□ 0.36
PKP4-204ENST00000421462 LDHDQ86WU2 507 aa17.32■□□□□ 0.36
PKP4-204ENST00000421462 NDUFAF2Q8N183 169 aa17.32■□□□□ 0.36
PKP4-204ENST00000421462 COL20A1Q9P218 1284 aa17.32■□□□□ 0.36
PKP4-204ENST00000421462 DRG1Q9Y295 367 aaKnown RBP17.32■□□□□ 0.36
PKP4-204ENST00000421462 TMEM191CA6NGB0 347 aa17.32■□□□□ 0.36
PKP4-204ENST00000421462 SPDYE16A6NNV3 312 aaPredicted RBP17.32■□□□□ 0.36
PKP4-204ENST00000421462 TMEM191BP0C7N4 346 aa17.32■□□□□ 0.36
PKP4-204ENST00000421462 DHRS4L1P0CG22 281 aa17.32■□□□□ 0.36
PKP4-204ENST00000421462 FOLH1Q04609 750 aa17.32■□□□□ 0.36
PKP4-204ENST00000421462 PPP6R3Q5H9R7 873 aaPredicted RBP17.32■□□□□ 0.36
PKP4-204ENST00000421462 ZBTB41Q5SVQ8 909 aa17.32■□□□□ 0.36
PKP4-204ENST00000421462 VWA5B1Q5TIE3 1220 aa17.32■□□□□ 0.36
PKP4-204ENST00000421462 FBXL19Q6PCT2 694 aa17.32■□□□□ 0.36
PKP4-204ENST00000421462 DARS2Q6PI48 645 aaKnown RBP17.32■□□□□ 0.36
PKP4-204ENST00000421462 PCGF5Q86SE9 256 aa17.32■□□□□ 0.36
PKP4-204ENST00000421462 FAF2Q96CS3 445 aa17.32■□□□□ 0.36
PKP4-204ENST00000421462 CEP170P1Q96L14 293 aa17.32■□□□□ 0.36
PKP4-204ENST00000421462 CNBD2Q96M20 576 aa17.32■□□□□ 0.36
PKP4-204ENST00000421462 CSRNP1Q96S65 589 aa17.32■□□□□ 0.36
PKP4-204ENST00000421462 ADAMTSL1Q8N6G6 1762 aa17.31■□□□□ 0.36
PKP4-204ENST00000421462 TESPA1A2RU30 521 aaPredicted RBP17.31■□□□□ 0.36
PKP4-204ENST00000421462 H0YIN7 160 aa17.31■□□□□ 0.36
PKP4-204ENST00000421462 NFIBO00712 420 aa17.31■□□□□ 0.36
PKP4-204ENST00000421462 ASLP04424 464 aa17.31■□□□□ 0.36
PKP4-204ENST00000421462 LIG4P49917 911 aa17.31■□□□□ 0.36
PKP4-204ENST00000421462 COG7P83436 770 aa17.31■□□□□ 0.36
PKP4-204ENST00000421462 ATG16L1Q676U5 607 aa17.31■□□□□ 0.36
PKP4-204ENST00000421462 CHSY1Q86X52 802 aa17.31■□□□□ 0.36
PKP4-204ENST00000421462 DEFB107AQ8IZN7 70 aa17.31■□□□□ 0.36
PKP4-204ENST00000421462 KCTD17Q8N5Z5 321 aa17.31■□□□□ 0.36
PKP4-204ENST00000421462 PRPF31Q8WWY3 499 aaKnown RBP17.31■□□□□ 0.36
PKP4-204ENST00000421462 HAPLN3Q96S86 360 aa17.31■□□□□ 0.36
PKP4-204ENST00000421462 IFT122Q9HBG6 1241 aa17.31■□□□□ 0.36
PKP4-204ENST00000421462 NUB1Q9Y5A7 615 aa17.31■□□□□ 0.36
PKP4-204ENST00000421462 ASTN2O75129 1339 aaPredicted RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms