RNA–Protein interactions for RNA: ENST00000410016.5

HOXD3-202, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXD3, Length 2,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-202ENST00000410016 CSADQ9Y600 493 aa16.61■□□□□ 0.25
HOXD3-202ENST00000410016 VDRP11473 427 aa16.6■□□□□ 0.25
HOXD3-202ENST00000410016 TSHRP16473 764 aa16.6■□□□□ 0.25
HOXD3-202ENST00000410016 CYP3A5P20815 502 aa16.6■□□□□ 0.25
HOXD3-202ENST00000410016 STIP1P31948 543 aaKnown RBP16.6■□□□□ 0.25
HOXD3-202ENST00000410016 POU5F1BQ06416 359 aa16.6■□□□□ 0.25
HOXD3-202ENST00000410016 BBS9Q3SYG4 887 aa16.6■□□□□ 0.25
HOXD3-202ENST00000410016 FAM102AQ5T9C2 384 aaPredicted RBP16.6■□□□□ 0.25
HOXD3-202ENST00000410016 NPNTQ6UXI9 565 aa16.6■□□□□ 0.25
HOXD3-202ENST00000410016 RPAINQ86UA6 219 aa16.6■□□□□ 0.25
HOXD3-202ENST00000410016 BANPQ8N9N5 519 aa16.6■□□□□ 0.25
HOXD3-202ENST00000410016 UBA3Q8TBC4 463 aa16.6■□□□□ 0.25
HOXD3-202ENST00000410016 L3MBTL3Q96JM7 780 aaPredicted RBP16.6■□□□□ 0.25
HOXD3-202ENST00000410016 MPHOSPH6Q99547 160 aaKnown RBP16.6■□□□□ 0.25
HOXD3-202ENST00000410016 ASB7Q9H672 318 aa16.6■□□□□ 0.25
HOXD3-202ENST00000410016 ETNK1Q9HBU6 452 aa16.6■□□□□ 0.25
HOXD3-202ENST00000410016 PDGFCQ9NRA1 345 aa16.6■□□□□ 0.25
HOXD3-202ENST00000410016 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.6■□□□□ 0.25
HOXD3-202ENST00000410016 C2CD4BA6NLJ0 364 aa16.6■□□□□ 0.25
HOXD3-202ENST00000410016 MCF2LO15068 1137 aa16.6■□□□□ 0.25
HOXD3-202ENST00000410016 MCF2P10911 925 aa16.6■□□□□ 0.25
HOXD3-202ENST00000410016 ADRA1DP25100 572 aa16.6■□□□□ 0.25
HOXD3-202ENST00000410016 NOMO1Q15155 1222 aa16.6■□□□□ 0.25
HOXD3-202ENST00000410016 ACCSLQ4AC99 568 aa16.6■□□□□ 0.25
HOXD3-202ENST00000410016 ILDR2Q71H61 639 aa16.6■□□□□ 0.25
HOXD3-202ENST00000410016 TCP10LQ8TDR4 215 aa16.6■□□□□ 0.25
HOXD3-202ENST00000410016 PIWIL1Q96J94 861 aaKnown RBP16.6■□□□□ 0.25
HOXD3-202ENST00000410016 HEXIM2Q96MH2 286 aaKnown RBP16.6■□□□□ 0.25
HOXD3-202ENST00000410016 ADPGKQ9BRR6 497 aa16.6■□□□□ 0.25
HOXD3-202ENST00000410016 T-ENOLP0DO92 83 aa16.59■□□□□ 0.25
HOXD3-202ENST00000410016 TXNP10599 105 aaKnown RBP16.59■□□□□ 0.25
HOXD3-202ENST00000410016 BASP1P80723 227 aaKnown RBP16.59■□□□□ 0.25
HOXD3-202ENST00000410016 SETDB1Q15047 1291 aa16.59■□□□□ 0.25
HOXD3-202ENST00000410016 PLEKHG4Q58EX7 1191 aa16.59■□□□□ 0.25
HOXD3-202ENST00000410016 STAMBPL1Q96FJ0 436 aa16.59■□□□□ 0.25
HOXD3-202ENST00000410016 HPDLQ96IR7 371 aa16.59■□□□□ 0.25
HOXD3-202ENST00000410016 CNPY3Q9BT09 278 aa16.59■□□□□ 0.25
HOXD3-202ENST00000410016 PDZD7Q9H5P4 517 aa16.59■□□□□ 0.25
HOXD3-202ENST00000410016 USP29Q9HBJ7 922 aa16.59■□□□□ 0.25
HOXD3-202ENST00000410016 STK38LQ9Y2H1 464 aa16.59■□□□□ 0.25
HOXD3-202ENST00000410016 A0A087WZ62 844 aa16.59■□□□□ 0.25
HOXD3-202ENST00000410016 IL4RP24394 825 aa16.59■□□□□ 0.25
HOXD3-202ENST00000410016 ELK3P41970 407 aa16.59■□□□□ 0.25
HOXD3-202ENST00000410016 CDH6P55285 790 aa16.59■□□□□ 0.25
HOXD3-202ENST00000410016 RNASELQ05823 741 aaKnown RBP16.59■□□□□ 0.25
HOXD3-202ENST00000410016 INCA1Q0VD86 236 aa16.59■□□□□ 0.25
HOXD3-202ENST00000410016 CBLBQ13191 982 aa16.59■□□□□ 0.25
HOXD3-202ENST00000410016 KCNJ11Q14654 390 aa16.59■□□□□ 0.25
HOXD3-202ENST00000410016 TLDC1Q6P9B6 456 aa16.59■□□□□ 0.25
HOXD3-202ENST00000410016 SH2D5Q6ZV89 423 aa16.59■□□□□ 0.25
HOXD3-202ENST00000410016 ZC3H18Q86VM9 953 aaKnown RBP16.59■□□□□ 0.25
HOXD3-202ENST00000410016 IFNLR1Q8IU57 520 aaPredicted RBP16.59■□□□□ 0.25
HOXD3-202ENST00000410016 RXFP2Q8WXD0 754 aa16.59■□□□□ 0.25
HOXD3-202ENST00000410016 OTUD5Q96G74 571 aa16.59■□□□□ 0.25
HOXD3-202ENST00000410016 FDXACB1Q9BRP7 624 aaPredicted RBP16.59■□□□□ 0.25
HOXD3-202ENST00000410016 C12orf65Q9H3J6 166 aaKnown RBP16.59■□□□□ 0.25
HOXD3-202ENST00000410016 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.59■□□□□ 0.25
HOXD3-202ENST00000410016 TXLNGQ9NUQ3 528 aa16.59■□□□□ 0.25
HOXD3-202ENST00000410016 BARX2Q9UMQ3 279 aaPredicted RBP16.59■□□□□ 0.25
HOXD3-202ENST00000410016 TEX264Q9Y6I9 313 aa16.59■□□□□ 0.25
HOXD3-202ENST00000410016 TM9SF1O15321 606 aa16.58■□□□□ 0.25
HOXD3-202ENST00000410016 ATP5HO75947 161 aa16.58■□□□□ 0.25
HOXD3-202ENST00000410016 PFKMP08237 780 aa16.58■□□□□ 0.25
HOXD3-202ENST00000410016 INSRRP14616 1297 aa16.58■□□□□ 0.25
HOXD3-202ENST00000410016 IBSPP21815 317 aaPredicted RBP16.58■□□□□ 0.25
HOXD3-202ENST00000410016 C15orf59Q2T9L4 293 aaPredicted RBP16.58■□□□□ 0.25
HOXD3-202ENST00000410016 FAM182AQ5T1J6 154 aa16.58■□□□□ 0.25
HOXD3-202ENST00000410016 AGGF1Q8N302 714 aaeCLIP16.58■□□□□ 0.25
HOXD3-202ENST00000410016 LINC01465Q8N7H1 131 aa16.58■□□□□ 0.25
HOXD3-202ENST00000410016 ALKBH8Q96BT7 664 aaKnown RBP16.58■□□□□ 0.25
HOXD3-202ENST00000410016 CPB2Q96IY4 423 aa16.58■□□□□ 0.25
HOXD3-202ENST00000410016 VPS11Q9H270 941 aa16.58■□□□□ 0.25
HOXD3-202ENST00000410016 LRMDAQ9H2I8 198 aa16.58■□□□□ 0.25
HOXD3-202ENST00000410016 ELP3Q9H9T3 547 aa16.58■□□□□ 0.25
HOXD3-202ENST00000410016 ERAP1Q9NZ08 941 aa16.58■□□□□ 0.25
HOXD3-202ENST00000410016 SLC17A7Q9P2U7 560 aa16.58■□□□□ 0.25
HOXD3-202ENST00000410016 CHMP2BQ9UQN3 213 aa16.58■□□□□ 0.25
HOXD3-202ENST00000410016 TCRBV9S1A1TA0A576 114 aa16.58■□□□□ 0.24
HOXD3-202ENST00000410016 GOLGA8RI6L899 631 aa16.58■□□□□ 0.24
HOXD3-202ENST00000410016 DCTN3O75935 186 aa16.58■□□□□ 0.24
HOXD3-202ENST00000410016 PDGFRAP16234 1089 aa16.58■□□□□ 0.24
HOXD3-202ENST00000410016 ARF4P18085 180 aaPredicted RBP16.58■□□□□ 0.24
HOXD3-202ENST00000410016 GPD1P21695 349 aa16.58■□□□□ 0.24
HOXD3-202ENST00000410016 ALDH3A1P30838 453 aa16.58■□□□□ 0.24
HOXD3-202ENST00000410016 PHKA2P46019 1235 aa16.58■□□□□ 0.24
HOXD3-202ENST00000410016 NDST1P52848 882 aa16.58■□□□□ 0.24
HOXD3-202ENST00000410016 IGBP1P78318 339 aa16.58■□□□□ 0.24
HOXD3-202ENST00000410016 ROR1Q01973 937 aa16.58■□□□□ 0.24
HOXD3-202ENST00000410016 TNFAIP2Q03169 654 aa16.58■□□□□ 0.24
HOXD3-202ENST00000410016 KCTD2Q14681 263 aa16.58■□□□□ 0.24
HOXD3-202ENST00000410016 DARS2Q6PI48 645 aaKnown RBP16.58■□□□□ 0.24
HOXD3-202ENST00000410016 LCLAT1Q6UWP7 414 aa16.58■□□□□ 0.24
HOXD3-202ENST00000410016 VSIG1Q86XK7 387 aa16.58■□□□□ 0.24
HOXD3-202ENST00000410016 CLMNQ96JQ2 1002 aa16.58■□□□□ 0.24
HOXD3-202ENST00000410016 CYTH2Q99418 400 aa16.58■□□□□ 0.24
HOXD3-202ENST00000410016 KLF6Q99612 283 aaPredicted RBP16.58■□□□□ 0.24
HOXD3-202ENST00000410016 E5RJQ4 531 aa16.57■□□□□ 0.24
HOXD3-202ENST00000410016 PIK3R2O00459 728 aa16.57■□□□□ 0.24
HOXD3-202ENST00000410016 ANP32DO95626 131 aa16.57■□□□□ 0.24
HOXD3-202ENST00000410016 C1QAP02745 245 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms