RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 TAB3Q8N5C8 712 aaPredicted RBP17.61■□□□□ 0.41
NUP50-203ENST00000407019 CCDC63Q8NA47 563 aa17.61■□□□□ 0.41
NUP50-203ENST00000407019 FBXO36Q8NEA4 188 aa17.61■□□□□ 0.41
NUP50-203ENST00000407019 PITPNM3Q9BZ71 974 aa17.61■□□□□ 0.41
NUP50-203ENST00000407019 XPO7Q9UIA9 1087 aaKnown RBP17.61■□□□□ 0.41
NUP50-203ENST00000407019 GGT7Q9UJ14 662 aa17.61■□□□□ 0.41
NUP50-203ENST00000407019 UTRNP46939 3433 aa17.61■□□□□ 0.41
NUP50-203ENST00000407019 TCRBV7S3A2A0A539 114 aa17.6■□□□□ 0.41
NUP50-203ENST00000407019 PIK3R2O00459 728 aa17.6■□□□□ 0.41
NUP50-203ENST00000407019 PRPSAP2O60256 369 aa17.6■□□□□ 0.41
NUP50-203ENST00000407019 SSTR1P30872 391 aa17.6■□□□□ 0.41
NUP50-203ENST00000407019 GRM5P41594 1212 aa17.6■□□□□ 0.41
NUP50-203ENST00000407019 BASP1P80723 227 aaKnown RBP17.6■□□□□ 0.41
NUP50-203ENST00000407019 FAM47CQ5HY64 1035 aa17.6■□□□□ 0.41
NUP50-203ENST00000407019 CYP4V2Q6ZWL3 525 aaPredicted RBP17.6■□□□□ 0.41
NUP50-203ENST00000407019 USP50Q70EL3 339 aaPredicted RBP17.6■□□□□ 0.41
NUP50-203ENST00000407019 PDIK1LQ8N165 341 aa17.6■□□□□ 0.41
NUP50-203ENST00000407019 GBA2Q9HCG7 927 aaPredicted RBP17.6■□□□□ 0.41
NUP50-203ENST00000407019 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.6■□□□□ 0.41
NUP50-203ENST00000407019 CFAP73A6NFT4 308 aa17.6■□□□□ 0.41
NUP50-203ENST00000407019 H3BRB1 525 aa17.6■□□□□ 0.41
NUP50-203ENST00000407019 PFKMP08237 780 aa17.6■□□□□ 0.41
NUP50-203ENST00000407019 CA4P22748 312 aa17.6■□□□□ 0.41
NUP50-203ENST00000407019 RNASELQ05823 741 aaKnown RBP17.6■□□□□ 0.41
NUP50-203ENST00000407019 DPYSL3Q14195 570 aa17.6■□□□□ 0.41
NUP50-203ENST00000407019 EFTUD2Q15029 972 aaKnown RBP eCLIP17.6■□□□□ 0.412e-7■■■■■ 30.8
NUP50-203ENST00000407019 GRIK4Q16099 956 aa17.6■□□□□ 0.41
NUP50-203ENST00000407019 SNCBQ16143 134 aa17.6■□□□□ 0.41
NUP50-203ENST00000407019 C15orf59Q2T9L4 293 aaPredicted RBP17.6■□□□□ 0.41
NUP50-203ENST00000407019 BBS9Q3SYG4 887 aa17.6■□□□□ 0.41
NUP50-203ENST00000407019 GALNTL6Q49A17 601 aa17.6■□□□□ 0.41
NUP50-203ENST00000407019 RNF43Q68DV7 783 aa17.6■□□□□ 0.41
NUP50-203ENST00000407019 DARS2Q6PI48 645 aaKnown RBP17.6■□□□□ 0.41
NUP50-203ENST00000407019 NPNTQ6UXI9 565 aa17.6■□□□□ 0.41
NUP50-203ENST00000407019 C3orf62Q6ZUJ4 267 aa17.6■□□□□ 0.41
NUP50-203ENST00000407019 ZC3H15Q8WU90 426 aaKnown RBP17.6■□□□□ 0.41
NUP50-203ENST00000407019 PIWIL1Q96J94 861 aaKnown RBP17.6■□□□□ 0.41
NUP50-203ENST00000407019 WDR83Q9BRX9 315 aaKnown RBP17.6■□□□□ 0.41
NUP50-203ENST00000407019 TUT1Q9H6E5 874 aaKnown RBP17.6■□□□□ 0.41
NUP50-203ENST00000407019 ACSS3Q9H6R3 686 aa17.6■□□□□ 0.41
NUP50-203ENST00000407019 KLHL14Q9P2G3 628 aa17.6■□□□□ 0.41
NUP50-203ENST00000407019 PLXNA1Q9UIW2 1896 aa17.59■□□□□ 0.41
NUP50-203ENST00000407019 TSHRP16473 764 aa17.59■□□□□ 0.41
NUP50-203ENST00000407019 STIP1P31948 543 aaKnown RBP17.59■□□□□ 0.41
NUP50-203ENST00000407019 KRT81Q14533 505 aa17.59■□□□□ 0.41
NUP50-203ENST00000407019 CDO1Q16878 200 aa17.59■□□□□ 0.41
NUP50-203ENST00000407019 DCAF4L1Q3SXM0 396 aa17.59■□□□□ 0.41
NUP50-203ENST00000407019 RGS9BPQ6ZS82 235 aa17.59■□□□□ 0.41
NUP50-203ENST00000407019 FAM47EQ6ZV65 393 aa17.59■□□□□ 0.41
NUP50-203ENST00000407019 ZNF410Q86VK4 478 aa17.59■□□□□ 0.41
NUP50-203ENST00000407019 PALM2Q8IXS6 379 aa17.59■□□□□ 0.41
NUP50-203ENST00000407019 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.59■□□□□ 0.41
NUP50-203ENST00000407019 FBF1Q8TES7 1133 aa17.59■□□□□ 0.41
NUP50-203ENST00000407019 RXFP1Q9HBX9 757 aa17.59■□□□□ 0.41
NUP50-203ENST00000407019 SSU72Q9NP77 194 aaKnown RBP17.59■□□□□ 0.41
NUP50-203ENST00000407019 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.59■□□□□ 0.41
NUP50-203ENST00000407019 A0A1W2PPM1 405 aa17.59■□□□□ 0.41
NUP50-203ENST00000407019 DPYSL4O14531 572 aa17.59■□□□□ 0.41
NUP50-203ENST00000407019 TYROBPO43914 113 aa17.59■□□□□ 0.41
NUP50-203ENST00000407019 GRAP2O75791 330 aa17.59■□□□□ 0.41
NUP50-203ENST00000407019 RPA3P35244 121 aaPredicted RBP17.59■□□□□ 0.41
NUP50-203ENST00000407019 RGS7P49802 495 aa17.59■□□□□ 0.41
NUP50-203ENST00000407019 ELF3P78545 371 aaPredicted RBP17.59■□□□□ 0.41
NUP50-203ENST00000407019 ACVR2BQ13705 512 aa17.59■□□□□ 0.41
NUP50-203ENST00000407019 RAB6CQ53S08 254 aa17.59■□□□□ 0.41
NUP50-203ENST00000407019 ZC3H18Q86VM9 953 aaKnown RBP17.59■□□□□ 0.41
NUP50-203ENST00000407019 C12orf29Q8N999 325 aa17.59■□□□□ 0.41
NUP50-203ENST00000407019 PAFAH2Q99487 392 aa17.59■□□□□ 0.41
NUP50-203ENST00000407019 DHRS4Q9BTZ2 278 aa17.59■□□□□ 0.41
NUP50-203ENST00000407019 KATNBL1Q9H079 304 aa17.59■□□□□ 0.41
NUP50-203ENST00000407019 RAB6CQ9H0N0 254 aa17.59■□□□□ 0.41
NUP50-203ENST00000407019 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.58■□□□□ 0.4
NUP50-203ENST00000407019 CHUKO15111 745 aa17.58■□□□□ 0.4
NUP50-203ENST00000407019 ATP2A2P16615 1042 aaKnown RBP17.58■□□□□ 0.4
NUP50-203ENST00000407019 NCALDP61601 193 aa17.58■□□□□ 0.4
NUP50-203ENST00000407019 BNIP1Q12981 228 aa17.58■□□□□ 0.4
NUP50-203ENST00000407019 PDK2Q15119 407 aa17.58■□□□□ 0.4
NUP50-203ENST00000407019 PDK4Q16654 411 aa17.58■□□□□ 0.4
NUP50-203ENST00000407019 CCDC14Q49A88 953 aa17.58■□□□□ 0.4
NUP50-203ENST00000407019 LDLRAD1Q5T700 205 aa17.58■□□□□ 0.4
NUP50-203ENST00000407019 ADGRD1Q6QNK2 874 aa17.58■□□□□ 0.4
NUP50-203ENST00000407019 ZNF467Q7Z7K2 595 aaPredicted RBP17.58■□□□□ 0.4
NUP50-203ENST00000407019 MAP7D3Q8IWC1 876 aa17.58■□□□□ 0.4
NUP50-203ENST00000407019 RMDN2Q96LZ7 410 aa17.58■□□□□ 0.4
NUP50-203ENST00000407019 RNF157Q96PX1 679 aa17.58■□□□□ 0.4
NUP50-203ENST00000407019 ECT2Q9H8V3 914 aa17.58■□□□□ 0.4
NUP50-203ENST00000407019 DERAQ9Y315 318 aa17.58■□□□□ 0.4
NUP50-203ENST00000407019 STARD13Q9Y3M8 1113 aa17.58■□□□□ 0.4
NUP50-203ENST00000407019 PLXNB2O15031 1838 aa17.57■□□□□ 0.4
NUP50-203ENST00000407019 H7C0C1 242 aa17.57■□□□□ 0.4
NUP50-203ENST00000407019 MGRN1O60291 552 aa17.57■□□□□ 0.4
NUP50-203ENST00000407019 NPTXRO95502 500 aa17.57■□□□□ 0.4
NUP50-203ENST00000407019 GBP2P32456 591 aaPredicted RBP17.57■□□□□ 0.4
NUP50-203ENST00000407019 ATP5OP48047 213 aa17.57■□□□□ 0.4
NUP50-203ENST00000407019 DNAJC3Q13217 504 aa17.57■□□□□ 0.4
NUP50-203ENST00000407019 SLC1A5Q15758 541 aa17.57■□□□□ 0.4
NUP50-203ENST00000407019 MARCH8Q5T0T0 291 aa17.57■□□□□ 0.4
NUP50-203ENST00000407019 PPP1R26Q5T8A7 1209 aaPredicted RBP17.57■□□□□ 0.4
NUP50-203ENST00000407019 HHATQ5VTY9 493 aa17.57■□□□□ 0.4
NUP50-203ENST00000407019 OLFML1Q6UWY5 402 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms