RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 C4orf33Q8N1A6 199 aa14.64□□□□□ -0.07
SCAF4-202ENST00000399804 CHMP6Q96FZ7 201 aa14.64□□□□□ -0.07
SCAF4-202ENST00000399804 SEPT5Q99719 369 aaPredicted RBP14.64□□□□□ -0.07
SCAF4-202ENST00000399804 SPON2Q9BUD6 331 aa14.64□□□□□ -0.07
SCAF4-202ENST00000399804 TRABDQ9H4I3 376 aa14.64□□□□□ -0.07
SCAF4-202ENST00000399804 PRKAG2Q9UGJ0 569 aa14.64□□□□□ -0.07
SCAF4-202ENST00000399804 CNTNAP2Q9UHC6 1331 aa14.63□□□□□ -0.07
SCAF4-202ENST00000399804 CAND2O75155 1236 aa14.63□□□□□ -0.07
SCAF4-202ENST00000399804 LGR5O75473 907 aa14.63□□□□□ -0.07
SCAF4-202ENST00000399804 USP33Q8TEY7 942 aa14.63□□□□□ -0.07
SCAF4-202ENST00000399804 FSD1LQ9BXM9 530 aa14.63□□□□□ -0.07
SCAF4-202ENST00000399804 SLC13A1Q9BZW2 595 aa14.63□□□□□ -0.07
SCAF4-202ENST00000399804 ROPN1BQ9BZX4 212 aaPredicted RBP14.63□□□□□ -0.07
SCAF4-202ENST00000399804 ROPN1Q9HAT0 212 aaPredicted RBP14.63□□□□□ -0.07
SCAF4-202ENST00000399804 BAIAP2L1Q9UHR4 511 aa14.63□□□□□ -0.07
SCAF4-202ENST00000399804 ZBBXA8MT70 800 aa14.63□□□□□ -0.07
SCAF4-202ENST00000399804 EIF3HO15372 352 aaKnown RBP eCLIP14.63□□□□□ -0.07
SCAF4-202ENST00000399804 PRKAR2AP13861 404 aaKnown RBP14.63□□□□□ -0.07
SCAF4-202ENST00000399804 MX2P20592 715 aa14.63□□□□□ -0.07
SCAF4-202ENST00000399804 MRPS6P82932 125 aaKnown RBP14.63□□□□□ -0.07
SCAF4-202ENST00000399804 PDK1Q15118 436 aa14.63□□□□□ -0.07
SCAF4-202ENST00000399804 MAPRE1Q15691 268 aaKnown RBP14.63□□□□□ -0.07
SCAF4-202ENST00000399804 CCL14Q16627 93 aa14.63□□□□□ -0.07
SCAF4-202ENST00000399804 SLC10A6Q3KNW5 377 aa14.63□□□□□ -0.07
SCAF4-202ENST00000399804 FAM133BQ5BKY9 247 aaKnown RBP14.63□□□□□ -0.07
SCAF4-202ENST00000399804 SRLQ86TD4 932 aa14.63□□□□□ -0.07
SCAF4-202ENST00000399804 LPPQ93052 612 aa14.63□□□□□ -0.07
SCAF4-202ENST00000399804 WDCPQ9H6R7 721 aa14.63□□□□□ -0.07
SCAF4-202ENST00000399804 C10orf88Q9H8K7 445 aa14.63□□□□□ -0.07
SCAF4-202ENST00000399804 GOLGA2P5Q9HBQ8 144 aa14.63□□□□□ -0.07
SCAF4-202ENST00000399804 PRDM5Q9NQX1 630 aaPredicted RBP14.63□□□□□ -0.07
SCAF4-202ENST00000399804 COL5A3P25940 1745 aaPredicted RBP14.63□□□□□ -0.07
SCAF4-202ENST00000399804 ARAP2Q8WZ64 1704 aa14.63□□□□□ -0.07
SCAF4-202ENST00000399804 PMM2O15305 246 aa14.63□□□□□ -0.07
SCAF4-202ENST00000399804 PIGRP01833 764 aa14.63□□□□□ -0.07
SCAF4-202ENST00000399804 SLC6A3Q01959 620 aa14.63□□□□□ -0.07
SCAF4-202ENST00000399804 PTPN20Q4JDL3 420 aa14.63□□□□□ -0.07
SCAF4-202ENST00000399804 ITPRIPL1Q6GPH6 555 aa14.63□□□□□ -0.07
SCAF4-202ENST00000399804 KDELC2Q7Z4H8 507 aa14.63□□□□□ -0.07
SCAF4-202ENST00000399804 SLFN11Q7Z7L1 901 aa14.63□□□□□ -0.07
SCAF4-202ENST00000399804 FAM129AQ9BZQ8 928 aa14.63□□□□□ -0.07
SCAF4-202ENST00000399804 CCDC68Q9H2F9 335 aa14.63□□□□□ -0.07
SCAF4-202ENST00000399804 YWHAZP63104 245 aaKnown RBP14.62□□□□□ -0.07
SCAF4-202ENST00000399804 CCT8L2Q96SF2 557 aa14.62□□□□□ -0.07
SCAF4-202ENST00000399804 EIF2AQ9BY44 585 aaKnown RBP14.62□□□□□ -0.07
SCAF4-202ENST00000399804 TUBGCP4Q9UGJ1 667 aa14.62□□□□□ -0.07
SCAF4-202ENST00000399804 IPO11Q9UI26 975 aaKnown RBP14.62□□□□□ -0.07
SCAF4-202ENST00000399804 PCDHB7Q9Y5E2 793 aa14.62□□□□□ -0.07
SCAF4-202ENST00000399804 DOCK2Q92608 1830 aa14.62□□□□□ -0.07
SCAF4-202ENST00000399804 DDX3YO15523 660 aaKnown RBP14.62□□□□□ -0.07
SCAF4-202ENST00000399804 HOXC6P09630 235 aa14.62□□□□□ -0.07
SCAF4-202ENST00000399804 ELNP15502 786 aa14.62□□□□□ -0.07
SCAF4-202ENST00000399804 UNC93AQ86WB7 457 aa14.62□□□□□ -0.07
SCAF4-202ENST00000399804 MICAL1Q8TDZ2 1067 aa14.62□□□□□ -0.07
SCAF4-202ENST00000399804 EDEM1Q92611 657 aa14.62□□□□□ -0.07
SCAF4-202ENST00000399804 DDX27Q96GQ7 796 aaKnown RBP14.62□□□□□ -0.07
SCAF4-202ENST00000399804 KLF6Q99612 283 aaPredicted RBP14.62□□□□□ -0.07
SCAF4-202ENST00000399804 ZSCAN5DPP0CG00 497 aa14.62□□□□□ -0.07
SCAF4-202ENST00000399804 NOGQ13253 232 aa14.62□□□□□ -0.07
SCAF4-202ENST00000399804 PCBP1Q15365 356 aaKnown RBP eCLIP14.62□□□□□ -0.07
SCAF4-202ENST00000399804 OVOS1Q6IE37 1185 aa14.62□□□□□ -0.07
SCAF4-202ENST00000399804 DEFB106AQ8N104 65 aa14.62□□□□□ -0.07
SCAF4-202ENST00000399804 NPLOC4Q8TAT6 608 aa14.62□□□□□ -0.07
SCAF4-202ENST00000399804 TMBIM4Q9HC24 238 aa14.62□□□□□ -0.07
SCAF4-202ENST00000399804 EDNRBP24530 442 aa14.61□□□□□ -0.07
SCAF4-202ENST00000399804 LDLRAD1Q5T700 205 aa14.61□□□□□ -0.07
SCAF4-202ENST00000399804 TAS1R3Q7RTX0 852 aa14.61□□□□□ -0.07
SCAF4-202ENST00000399804 TFAP2BQ92481 460 aa14.61□□□□□ -0.07
SCAF4-202ENST00000399804 RAPGEF5Q92565 580 aa14.61□□□□□ -0.07
SCAF4-202ENST00000399804 TGS1Q96RS0 853 aaKnown RBP14.61□□□□□ -0.07
SCAF4-202ENST00000399804 PRMT1Q99873 361 aaKnown RBP14.61□□□□□ -0.07
SCAF4-202ENST00000399804 ERVK-5Q9HDB9 667 aa14.61□□□□□ -0.07
SCAF4-202ENST00000399804 SMIM28A0A1B0GU29 152 aa14.61□□□□□ -0.07
SCAF4-202ENST00000399804 TMEM120BA0PK00 339 aa14.61□□□□□ -0.07
SCAF4-202ENST00000399804 CCDC78A2IDD5 438 aa14.61□□□□□ -0.07
SCAF4-202ENST00000399804 TMEM191CA6NGB0 347 aa14.61□□□□□ -0.07
SCAF4-202ENST00000399804 CRCPO75575 148 aa14.61□□□□□ -0.07
SCAF4-202ENST00000399804 TARBP2Q15633 366 aaKnown RBP14.61□□□□□ -0.07
SCAF4-202ENST00000399804 DEFB115Q30KQ5 88 aa14.61□□□□□ -0.07
SCAF4-202ENST00000399804 JOSD2Q8TAC2 188 aa14.61□□□□□ -0.07
SCAF4-202ENST00000399804 ADAM32Q8TC27 787 aa14.61□□□□□ -0.07
SCAF4-202ENST00000399804 CPXM1Q96SM3 734 aa14.61□□□□□ -0.07
SCAF4-202ENST00000399804 VPS11Q9H270 941 aa14.61□□□□□ -0.07
SCAF4-202ENST00000399804 ALG13Q9NP73 1137 aaKnown RBP14.61□□□□□ -0.07
SCAF4-202ENST00000399804 GIPC1O14908 333 aa14.61□□□□□ -0.07
SCAF4-202ENST00000399804 CD52P31358 61 aa14.61□□□□□ -0.07
SCAF4-202ENST00000399804 RASSF2P50749 326 aa14.61□□□□□ -0.07
SCAF4-202ENST00000399804 ZNF792Q3KQV3 632 aa14.61□□□□□ -0.07
SCAF4-202ENST00000399804 PPP1R26Q5T8A7 1209 aaPredicted RBP14.61□□□□□ -0.07
SCAF4-202ENST00000399804 TRIM42Q8IWZ5 723 aa14.61□□□□□ -0.07
SCAF4-202ENST00000399804 MSL3Q8N5Y2 521 aaKnown RBP14.61□□□□□ -0.07
SCAF4-202ENST00000399804 MRPL45Q9BRJ2 306 aaKnown RBP14.61□□□□□ -0.07
SCAF4-202ENST00000399804 EPN3Q9H201 632 aa14.61□□□□□ -0.07
SCAF4-202ENST00000399804 PSD3Q9NYI0 1048 aa14.61□□□□□ -0.07
SCAF4-202ENST00000399804 NR2E1Q9Y466 385 aa14.61□□□□□ -0.07
SCAF4-202ENST00000399804 MAST2Q6P0Q8 1798 aa14.61□□□□□ -0.07
SCAF4-202ENST00000399804 TTC4O95801 387 aa14.6□□□□□ -0.07
SCAF4-202ENST00000399804 KDELR1P24390 212 aa14.6□□□□□ -0.07
SCAF4-202ENST00000399804 GHRHRQ02643 423 aa14.6□□□□□ -0.07
SCAF4-202ENST00000399804 PLEKHA7Q6IQ23 1121 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms