RNA–Protein interactions for RNA: ENST00000394224.3

SIPA1-201, Transcript of signal-induced proliferation-associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1, Length 3,628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-201ENST00000394224 LMNB2Q03252 620 aa17.47■□□□□ 0.39
SIPA1-201ENST00000394224 ZC3H12AQ5D1E8 599 aaKnown RBP17.47■□□□□ 0.39
SIPA1-201ENST00000394224 CDCA2Q69YH5 1023 aaPredicted RBP17.47■□□□□ 0.39
SIPA1-201ENST00000394224 RIPOR1Q6ZS17 1223 aa17.47■□□□□ 0.39
SIPA1-201ENST00000394224 ADAM32Q8TC27 787 aa17.47■□□□□ 0.39
SIPA1-201ENST00000394224 ATP6V0A1Q93050 837 aa17.47■□□□□ 0.39
SIPA1-201ENST00000394224 PHF12Q96QT6 1004 aa17.47■□□□□ 0.39
SIPA1-201ENST00000394224 FAM49BQ9NUQ9 324 aa17.47■□□□□ 0.39
SIPA1-201ENST00000394224 ZC3H7BQ9UGR2 993 aaKnown RBP17.47■□□□□ 0.39
SIPA1-201ENST00000394224 INPP5FQ9Y2H2 1132 aa17.47■□□□□ 0.39
SIPA1-201ENST00000394224 GOLGA8QA0A0J9YX86 632 aa17.47■□□□□ 0.39
SIPA1-201ENST00000394224 GOLGA8OA6NCC3 632 aa17.47■□□□□ 0.39
SIPA1-201ENST00000394224 GOLGA8NF8WBI6 632 aa17.47■□□□□ 0.39
SIPA1-201ENST00000394224 ALOX15BO15296 676 aa17.47■□□□□ 0.39
SIPA1-201ENST00000394224 B4GALT5O43286 388 aa17.47■□□□□ 0.39
SIPA1-201ENST00000394224 C4BPAP04003 597 aaKnown RBP17.47■□□□□ 0.39
SIPA1-201ENST00000394224 C6orf222P0C671 652 aaPredicted RBP17.47■□□□□ 0.39
SIPA1-201ENST00000394224 ATP6V1B1P15313 513 aa17.47■□□□□ 0.39
SIPA1-201ENST00000394224 RANBP1P43487 201 aa17.47■□□□□ 0.39
SIPA1-201ENST00000394224 ATXN1P54253 815 aaKnown RBP17.47■□□□□ 0.39
SIPA1-201ENST00000394224 GRIK3Q13003 919 aa17.47■□□□□ 0.39
SIPA1-201ENST00000394224 C4orf19Q8IY42 314 aa17.47■□□□□ 0.39
SIPA1-201ENST00000394224 PIP4K2CQ8TBX8 421 aa17.47■□□□□ 0.39
SIPA1-201ENST00000394224 CPXM1Q96SM3 734 aa17.47■□□□□ 0.39
SIPA1-201ENST00000394224 C20orf27Q9GZN8 174 aa17.47■□□□□ 0.39
SIPA1-201ENST00000394224 GOLGA8TH3BQL2 631 aa17.46■□□□□ 0.39
SIPA1-201ENST00000394224 M0QYV0 167 aa17.46■□□□□ 0.39
SIPA1-201ENST00000394224 CIB2O75838 187 aa17.46■□□□□ 0.39
SIPA1-201ENST00000394224 ACO1P21399 889 aaKnown RBP17.46■□□□□ 0.39
SIPA1-201ENST00000394224 SOX11P35716 441 aa17.46■□□□□ 0.39
SIPA1-201ENST00000394224 SP2Q02086 613 aa17.46■□□□□ 0.39
SIPA1-201ENST00000394224 MORF4L2Q15014 288 aa17.46■□□□□ 0.39
SIPA1-201ENST00000394224 RBBP5Q15291 538 aaKnown RBP17.46■□□□□ 0.39
SIPA1-201ENST00000394224 PPIL6Q8IXY8 311 aa17.46■□□□□ 0.39
SIPA1-201ENST00000394224 NLGN1Q8N2Q7 840 aa17.46■□□□□ 0.39
SIPA1-201ENST00000394224 C12orf29Q8N999 325 aa17.46■□□□□ 0.39
SIPA1-201ENST00000394224 FAM81BQ96LP2 452 aa17.46■□□□□ 0.39
SIPA1-201ENST00000394224 XIRP1Q702N8 1843 aaKnown RBP17.46■□□□□ 0.39
SIPA1-201ENST00000394224 LRCH4O75427 683 aa17.46■□□□□ 0.39
SIPA1-201ENST00000394224 TRPA1O75762 1119 aa17.46■□□□□ 0.39
SIPA1-201ENST00000394224 RNF8O76064 485 aa17.46■□□□□ 0.39
SIPA1-201ENST00000394224 NELFEP18615 380 aaKnown RBP17.46■□□□□ 0.39
SIPA1-201ENST00000394224 MIPP30301 263 aa17.46■□□□□ 0.39
SIPA1-201ENST00000394224 SYDE1Q6ZW31 735 aaPredicted RBP17.46■□□□□ 0.39
SIPA1-201ENST00000394224 MPP5Q8N3R9 675 aa17.46■□□□□ 0.39
SIPA1-201ENST00000394224 SH3TC2Q8TF17 1288 aa17.46■□□□□ 0.39
SIPA1-201ENST00000394224 MTBPQ96DY7 904 aa17.46■□□□□ 0.39
SIPA1-201ENST00000394224 TTC25Q96NG3 672 aa17.46■□□□□ 0.39
SIPA1-201ENST00000394224 AGAP3Q96P47 875 aa17.46■□□□□ 0.39
SIPA1-201ENST00000394224 CYP1A1P04798 512 aaPredicted RBP17.46■□□□□ 0.38
SIPA1-201ENST00000394224 NFIL3Q16649 462 aa17.46■□□□□ 0.38
SIPA1-201ENST00000394224 TRIM11Q96F44 468 aa17.46■□□□□ 0.38
SIPA1-201ENST00000394224 TUBGCP5Q96RT8 1024 aa17.46■□□□□ 0.38
SIPA1-201ENST00000394224 SMYD2Q9NRG4 433 aa17.46■□□□□ 0.38
SIPA1-201ENST00000394224 CYTH4Q9UIA0 394 aa17.46■□□□□ 0.38
SIPA1-201ENST00000394224 ZNRF3Q9ULT6 936 aa17.46■□□□□ 0.38
SIPA1-201ENST00000394224 TTLL3Q9Y4R7 772 aa17.46■□□□□ 0.38
SIPA1-201ENST00000394224 UBIAD1Q9Y5Z9 338 aa17.46■□□□□ 0.38
SIPA1-201ENST00000394224 A0A0B4J269 797 aa17.45■□□□□ 0.38
SIPA1-201ENST00000394224 MMP8P22894 467 aa17.45■□□□□ 0.38
SIPA1-201ENST00000394224 SLC34A1Q06495 639 aa17.45■□□□□ 0.38
SIPA1-201ENST00000394224 SLC45A4Q5BKX6 768 aa17.45■□□□□ 0.38
SIPA1-201ENST00000394224 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.45■□□□□ 0.38
SIPA1-201ENST00000394224 ZNF333Q96JL9 665 aa17.45■□□□□ 0.38
SIPA1-201ENST00000394224 DNAJC1Q96KC8 554 aaKnown RBP17.45■□□□□ 0.38
SIPA1-201ENST00000394224 ZNF358Q9NW07 568 aa17.45■□□□□ 0.38
SIPA1-201ENST00000394224 C2CD2LO14523 706 aa17.45■□□□□ 0.38
SIPA1-201ENST00000394224 ATP5HO75947 161 aa17.45■□□□□ 0.38
SIPA1-201ENST00000394224 ASNSP08243 561 aa17.45■□□□□ 0.38
SIPA1-201ENST00000394224 RBL1P28749 1068 aa17.45■□□□□ 0.38
SIPA1-201ENST00000394224 PTAR1Q7Z6K3 402 aaPredicted RBP17.45■□□□□ 0.38
SIPA1-201ENST00000394224 MCF2L2Q86YR7 1114 aa17.45■□□□□ 0.38
SIPA1-201ENST00000394224 FBXO41Q8TF61 875 aa17.45■□□□□ 0.38
SIPA1-201ENST00000394224 IFT122Q9HBG6 1241 aa17.45■□□□□ 0.38
SIPA1-201ENST00000394224 KCNG1Q9UIX4 513 aa17.45■□□□□ 0.38
SIPA1-201ENST00000394224 USP12O75317 370 aa17.45■□□□□ 0.38
SIPA1-201ENST00000394224 ZWINTO95229 277 aa17.45■□□□□ 0.38
SIPA1-201ENST00000394224 RABGAP1LQ5R372 815 aa17.45■□□□□ 0.38
SIPA1-201ENST00000394224 PLEKHA7Q6IQ23 1121 aa17.45■□□□□ 0.38
SIPA1-201ENST00000394224 FAM160B2Q86V87 743 aa17.45■□□□□ 0.38
SIPA1-201ENST00000394224 RASSF3Q86WH2 238 aa17.45■□□□□ 0.38
SIPA1-201ENST00000394224 WDTC1Q8N5D0 677 aa17.45■□□□□ 0.38
SIPA1-201ENST00000394224 PRPF31Q8WWY3 499 aaKnown RBP17.45■□□□□ 0.38
SIPA1-201ENST00000394224 SH3GL3Q99963 347 aa17.45■□□□□ 0.38
SIPA1-201ENST00000394224 HERC5Q9UII4 1024 aaKnown RBP17.45■□□□□ 0.38
SIPA1-201ENST00000394224 COQ4Q9Y3A0 265 aa17.45■□□□□ 0.38
SIPA1-201ENST00000394224 KRT76Q01546 638 aa17.44■□□□□ 0.38
SIPA1-201ENST00000394224 PSMD6Q15008 389 aa17.44■□□□□ 0.38
SIPA1-201ENST00000394224 TNS4Q8IZW8 715 aa17.44■□□□□ 0.38
SIPA1-201ENST00000394224 QTRT2Q9H974 415 aaKnown RBP17.44■□□□□ 0.38
SIPA1-201ENST00000394224 CHRM1P11229 460 aaPredicted RBP17.44■□□□□ 0.38
SIPA1-201ENST00000394224 CCNFP41002 786 aa17.44■□□□□ 0.38
SIPA1-201ENST00000394224 CDK16Q00536 496 aa17.44■□□□□ 0.38
SIPA1-201ENST00000394224 DPYSL3Q14195 570 aa17.44■□□□□ 0.38
SIPA1-201ENST00000394224 PPM1JQ5JR12 505 aa17.44■□□□□ 0.38
SIPA1-201ENST00000394224 C6orf163Q5TEZ5 329 aa17.44■□□□□ 0.38
SIPA1-201ENST00000394224 B3GNT9Q6UX72 402 aa17.44■□□□□ 0.38
SIPA1-201ENST00000394224 ARFGAP1Q8N6T3 406 aa17.44■□□□□ 0.38
SIPA1-201ENST00000394224 ADPGKQ9BRR6 497 aa17.44■□□□□ 0.38
SIPA1-201ENST00000394224 AVENQ9NQS1 362 aaPredicted RBP17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms