RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 RNF11Q9Y3C5 154 aa9.95□□□□□ -0.82
SF3A3-201ENST00000373019 SBF2Q86WG5 1849 aa9.95□□□□□ -0.82
SF3A3-201ENST00000373019 IQCA1LA6NCM1 817 aa9.95□□□□□ -0.82
SF3A3-201ENST00000373019 TNFRSF10AO00220 468 aa9.95□□□□□ -0.82
SF3A3-201ENST00000373019 FOXN3O00409 490 aaPredicted RBP9.95□□□□□ -0.82
SF3A3-201ENST00000373019 PEX3P56589 373 aa9.95□□□□□ -0.82
SF3A3-201ENST00000373019 PUM3Q15397 648 aaKnown RBP9.95□□□□□ -0.82
SF3A3-201ENST00000373019 OASLQ15646 514 aaKnown RBP9.95□□□□□ -0.82
SF3A3-201ENST00000373019 PARP10Q53GL7 1025 aa9.95□□□□□ -0.82
SF3A3-201ENST00000373019 KRT79Q5XKE5 535 aa9.95□□□□□ -0.82
SF3A3-201ENST00000373019 XKR5Q6UX68 686 aa9.95□□□□□ -0.82
SF3A3-201ENST00000373019 RSPH3Q86UC2 560 aa9.95□□□□□ -0.82
SF3A3-201ENST00000373019 RTKN2Q8IZC4 609 aa9.95□□□□□ -0.82
SF3A3-201ENST00000373019 PQLC1Q8N2U9 271 aa9.95□□□□□ -0.82
SF3A3-201ENST00000373019 TANKQ92844 425 aa9.95□□□□□ -0.82
SF3A3-201ENST00000373019 ISOC1Q96CN7 298 aa9.95□□□□□ -0.82
SF3A3-201ENST00000373019 TRMT112Q9UI30 125 aaKnown RBP9.95□□□□□ -0.82
SF3A3-201ENST00000373019 RABGEF1Q9UJ41 708 aa9.95□□□□□ -0.82
SF3A3-201ENST00000373019 CORINQ9Y5Q5 1042 aa9.95□□□□□ -0.82
SF3A3-201ENST00000373019 LRP5O75197 1615 aa9.94□□□□□ -0.82
SF3A3-201ENST00000373019 TDP2O95551 362 aa9.94□□□□□ -0.82
SF3A3-201ENST00000373019 AOC1P19801 751 aa9.94□□□□□ -0.82
SF3A3-201ENST00000373019 YWHAGP61981 247 aaKnown RBP eCLIP9.94□□□□□ -0.82
SF3A3-201ENST00000373019 DYNLL1P63167 89 aaKnown RBP9.94□□□□□ -0.82
SF3A3-201ENST00000373019 PDE1CQ14123 709 aaPredicted RBP9.94□□□□□ -0.82
SF3A3-201ENST00000373019 SEPT7Q16181 437 aaKnown RBP9.94□□□□□ -0.82
SF3A3-201ENST00000373019 EGFLAMQ63HQ2 1017 aa9.94□□□□□ -0.82
SF3A3-201ENST00000373019 ADGRD1Q6QNK2 874 aa9.94□□□□□ -0.82
SF3A3-201ENST00000373019 SH2D5Q6ZV89 423 aa9.94□□□□□ -0.82
SF3A3-201ENST00000373019 GRK7Q8WTQ7 553 aa9.94□□□□□ -0.82
SF3A3-201ENST00000373019 C12orf43Q96C57 262 aaKnown RBP9.94□□□□□ -0.82
SF3A3-201ENST00000373019 MAELQ96JY0 434 aaKnown RBP9.94□□□□□ -0.82
SF3A3-201ENST00000373019 DHRS4Q9BTZ2 278 aa9.94□□□□□ -0.82
SF3A3-201ENST00000373019 VPS37BQ9H9H4 285 aa9.94□□□□□ -0.82
SF3A3-201ENST00000373019 KLHL3Q9UH77 587 aa9.94□□□□□ -0.82
SF3A3-201ENST00000373019 TMA7Q9Y2S6 64 aaKnown RBP9.94□□□□□ -0.82
SF3A3-201ENST00000373019 MAGEB6P1A0A0J9YX57 407 aa9.94□□□□□ -0.82
SF3A3-201ENST00000373019 DYTNA2CJ06 578 aa9.94□□□□□ -0.82
SF3A3-201ENST00000373019 KRBA1A5PL33 1030 aa9.94□□□□□ -0.82
SF3A3-201ENST00000373019 ERVV-1B6SEH8 477 aa9.94□□□□□ -0.82
SF3A3-201ENST00000373019 USP17L12C9JPN9 530 aa9.94□□□□□ -0.82
SF3A3-201ENST00000373019 USP17L21D6R901 530 aa9.94□□□□□ -0.82
SF3A3-201ENST00000373019 ATE1O95260 518 aa9.94□□□□□ -0.82
SF3A3-201ENST00000373019 CD247P20963 164 aa9.94□□□□□ -0.82
SF3A3-201ENST00000373019 HMOX2P30519 316 aa9.94□□□□□ -0.82
SF3A3-201ENST00000373019 HSD17B4P51659 736 aa9.94□□□□□ -0.82
SF3A3-201ENST00000373019 IRX4P78413 519 aa9.94□□□□□ -0.82
SF3A3-201ENST00000373019 KNOP1Q1ED39 458 aaKnown RBP9.94□□□□□ -0.82
SF3A3-201ENST00000373019 ZNF746Q6NUN9 644 aaPredicted RBP9.94□□□□□ -0.82
SF3A3-201ENST00000373019 WDR75Q8IWA0 830 aaKnown RBP9.94□□□□□ -0.82
SF3A3-201ENST00000373019 ZBTB38Q8NAP3 1195 aaPredicted RBP9.94□□□□□ -0.82
SF3A3-201ENST00000373019 FAM111AQ96PZ2 611 aa9.94□□□□□ -0.82
SF3A3-201ENST00000373019 PCDHB18PQ96TA0 734 aa9.94□□□□□ -0.82
SF3A3-201ENST00000373019 TMEM260Q9NX78 707 aa9.94□□□□□ -0.82
SF3A3-201ENST00000373019 DKK3Q9UBP4 350 aa9.94□□□□□ -0.82
SF3A3-201ENST00000373019 CARD8Q9Y2G2 431 aa9.94□□□□□ -0.82
SF3A3-201ENST00000373019 SHANK3Q9BYB0 1731 aa9.94□□□□□ -0.82
SF3A3-201ENST00000373019 TMEM114B3SHH9 223 aa9.94□□□□□ -0.82
SF3A3-201ENST00000373019 UGT1A9O60656 530 aa9.94□□□□□ -0.82
SF3A3-201ENST00000373019 BANF1O75531 89 aa9.94□□□□□ -0.82
SF3A3-201ENST00000373019 PROCP04070 461 aa9.94□□□□□ -0.82
SF3A3-201ENST00000373019 PCP11498 1178 aaKnown RBP9.94□□□□□ -0.82
SF3A3-201ENST00000373019 MYCLP1P12525 358 aaPredicted RBP9.94□□□□□ -0.82
SF3A3-201ENST00000373019 UGT1A6P19224 532 aa9.94□□□□□ -0.82
SF3A3-201ENST00000373019 UGT1A1P22309 533 aa9.94□□□□□ -0.82
SF3A3-201ENST00000373019 UGT1A4P22310 534 aa9.94□□□□□ -0.82
SF3A3-201ENST00000373019 UGT1A3P35503 534 aa9.94□□□□□ -0.82
SF3A3-201ENST00000373019 UGT1A5P35504 534 aa9.94□□□□□ -0.82
SF3A3-201ENST00000373019 KLF1Q13351 362 aaPredicted RBP9.94□□□□□ -0.82
SF3A3-201ENST00000373019 BPHLQ86WA6 291 aaPredicted RBP9.94□□□□□ -0.82
SF3A3-201ENST00000373019 CPSF7Q8N684 471 aaKnown RBP9.94□□□□□ -0.82
SF3A3-201ENST00000373019 TRIML2Q8N7C3 387 aa9.94□□□□□ -0.82
SF3A3-201ENST00000373019 HELQQ8TDG4 1101 aa9.94□□□□□ -0.82
SF3A3-201ENST00000373019 EBF4Q9BQW3 602 aa9.94□□□□□ -0.82
SF3A3-201ENST00000373019 INO80BQ9C086 356 aaPredicted RBP9.94□□□□□ -0.82
SF3A3-201ENST00000373019 C20orf27Q9GZN8 174 aa9.94□□□□□ -0.82
SF3A3-201ENST00000373019 CDH19Q9H159 772 aa9.94□□□□□ -0.82
SF3A3-201ENST00000373019 CPVLQ9H3G5 476 aa9.94□□□□□ -0.82
SF3A3-201ENST00000373019 UGT1A7Q9HAW7 530 aa9.94□□□□□ -0.82
SF3A3-201ENST00000373019 UGT1A10Q9HAW8 530 aa9.94□□□□□ -0.82
SF3A3-201ENST00000373019 UGT1A8Q9HAW9 530 aa9.94□□□□□ -0.82
SF3A3-201ENST00000373019 POU2F3Q9UKI9 436 aa9.94□□□□□ -0.82
SF3A3-201ENST00000373019 PSMD13Q9UNM6 376 aa9.94□□□□□ -0.82
SF3A3-201ENST00000373019 RABL2BQ9UNT1 228 aa9.94□□□□□ -0.82
SF3A3-201ENST00000373019 PPME1Q9Y570 386 aa9.94□□□□□ -0.82
SF3A3-201ENST00000373019 CICQ96RK0 1608 aaPredicted RBP9.94□□□□□ -0.82
SF3A3-201ENST00000373019 ASTN1O14525 1302 aa9.94□□□□□ -0.82
SF3A3-201ENST00000373019 SMCO2A6NFE2 343 aa9.93□□□□□ -0.82
SF3A3-201ENST00000373019 PSMD12O00232 456 aaPredicted RBP9.93□□□□□ -0.82
SF3A3-201ENST00000373019 KLF11O14901 512 aa9.93□□□□□ -0.82
SF3A3-201ENST00000373019 PFDN6O15212 129 aa9.93□□□□□ -0.82
SF3A3-201ENST00000373019 MGEA5O60502 916 aa9.93□□□□□ -0.82
SF3A3-201ENST00000373019 SERPINB2P05120 415 aa9.93□□□□□ -0.82
SF3A3-201ENST00000373019 SERPINA6P08185 405 aa9.93□□□□□ -0.82
SF3A3-201ENST00000373019 MAN1A1P33908 653 aa9.93□□□□□ -0.82
SF3A3-201ENST00000373019 BCAMP50895 628 aa9.93□□□□□ -0.82
SF3A3-201ENST00000373019 SCNN1DP51172 638 aa9.93□□□□□ -0.82
SF3A3-201ENST00000373019 BMXP51813 675 aa9.93□□□□□ -0.82
SF3A3-201ENST00000373019 NR1D2Q14995 579 aa9.93□□□□□ -0.82
SF3A3-201ENST00000373019 CBWD6Q4V339 395 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms