RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 GPR87Q9BY21 358 aa6.62□□□□□ -1.35
RNU4-39P-201ENST00000362455 EIF2AQ9BY44 585 aaKnown RBP6.62□□□□□ -1.35
RNU4-39P-201ENST00000362455 HSFX1Q9UBD0 423 aa6.62□□□□□ -1.35
RNU4-39P-201ENST00000362455 USP15Q9Y4E8 981 aaPredicted RBP6.62□□□□□ -1.35
RNU4-39P-201ENST00000362455 AATKQ6ZMQ8 1374 aa6.61□□□□□ -1.35
RNU4-39P-201ENST00000362455 A0A087WZ62 844 aa6.61□□□□□ -1.35
RNU4-39P-201ENST00000362455 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.61□□□□□ -1.35
RNU4-39P-201ENST00000362455 FAM234BA2RU67 622 aa6.61□□□□□ -1.35
RNU4-39P-201ENST00000362455 RAB27BO00194 218 aa6.61□□□□□ -1.35
RNU4-39P-201ENST00000362455 HNRNPDLO14979 420 aaKnown RBP6.61□□□□□ -1.35
RNU4-39P-201ENST00000362455 PRICKLE3O43900 615 aaPredicted RBP6.61□□□□□ -1.35
RNU4-39P-201ENST00000362455 SKAP2O75563 359 aaPredicted RBP6.61□□□□□ -1.35
RNU4-39P-201ENST00000362455 CSTBP04080 98 aaKnown RBP6.61□□□□□ -1.35
RNU4-39P-201ENST00000362455 CYP2C9P11712 490 aa6.61□□□□□ -1.35
RNU4-39P-201ENST00000362455 BTF3P20290 206 aaKnown RBP6.61□□□□□ -1.35
RNU4-39P-201ENST00000362455 COMTP21964 271 aa6.61□□□□□ -1.35
RNU4-39P-201ENST00000362455 ACVR2AP27037 513 aa6.61□□□□□ -1.35
RNU4-39P-201ENST00000362455 RNASE9P60153 205 aaKnown RBP6.61□□□□□ -1.35
RNU4-39P-201ENST00000362455 SLC29A2Q14542 456 aa6.61□□□□□ -1.35
RNU4-39P-201ENST00000362455 IQCB1Q15051 598 aa6.61□□□□□ -1.35
RNU4-39P-201ENST00000362455 PLA1AQ53H76 456 aa6.61□□□□□ -1.35
RNU4-39P-201ENST00000362455 TAF2Q6P1X5 1199 aa6.61□□□□□ -1.35
RNU4-39P-201ENST00000362455 FBXO38Q6PIJ6 1188 aa6.61□□□□□ -1.35
RNU4-39P-201ENST00000362455 Q6ZSN1 163 aa6.61□□□□□ -1.35
RNU4-39P-201ENST00000362455 LCNL1Q6ZST4 164 aa6.61□□□□□ -1.35
RNU4-39P-201ENST00000362455 ARHGEF25Q86VW2 580 aa6.61□□□□□ -1.35
RNU4-39P-201ENST00000362455 GAS2L3Q86XJ1 694 aa6.61□□□□□ -1.35
RNU4-39P-201ENST00000362455 CYP2W1Q8TAV3 490 aa6.61□□□□□ -1.35
RNU4-39P-201ENST00000362455 SCLT1Q96NL6 688 aa6.61□□□□□ -1.35
RNU4-39P-201ENST00000362455 PPP1R9BQ96SB3 815 aa6.61□□□□□ -1.35
RNU4-39P-201ENST00000362455 MESP1Q9BRJ9 268 aa6.61□□□□□ -1.35
RNU4-39P-201ENST00000362455 SYT17Q9BSW7 474 aa6.61□□□□□ -1.35
RNU4-39P-201ENST00000362455 SSBP3Q9BWW4 388 aaPredicted RBP6.61□□□□□ -1.35
RNU4-39P-201ENST00000362455 KRTAP4-8Q9BYQ9 185 aa6.61□□□□□ -1.35
RNU4-39P-201ENST00000362455 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.61□□□□□ -1.35
RNU4-39P-201ENST00000362455 MAGEB5Q9BZ81 275 aa6.61□□□□□ -1.35
RNU4-39P-201ENST00000362455 AS3MTQ9HBK9 375 aa6.61□□□□□ -1.35
RNU4-39P-201ENST00000362455 AGO4Q9HCK5 861 aaKnown RBP6.61□□□□□ -1.35
RNU4-39P-201ENST00000362455 PCDHGB3Q9Y5G1 929 aa6.61□□□□□ -1.35
RNU4-39P-201ENST00000362455 CRB1P82279 1406 aa6.6□□□□□ -1.35
RNU4-39P-201ENST00000362455 RGPD1P0DJD0 1748 aa6.6□□□□□ -1.35
RNU4-39P-201ENST00000362455 A0A1B0GTW7 788 aa6.6□□□□□ -1.35
RNU4-39P-201ENST00000362455 CCDC195A0A1B0GUA6 201 aa6.6□□□□□ -1.35
RNU4-39P-201ENST00000362455 LOC102723971A0A1B0GUV8 181 aa6.6□□□□□ -1.35
RNU4-39P-201ENST00000362455 GOLGA6L3A6NEY3 463 aa6.6□□□□□ -1.35
RNU4-39P-201ENST00000362455 GOLGA6L6A8MZA4 724 aa6.6□□□□□ -1.35
RNU4-39P-201ENST00000362455 PATE3B3GLJ2 98 aa6.6□□□□□ -1.35
RNU4-39P-201ENST00000362455 H7C4K7 107 aa6.6□□□□□ -1.35
RNU4-39P-201ENST00000362455 PODXLO00592 558 aa6.6□□□□□ -1.35
RNU4-39P-201ENST00000362455 FGAP02671 866 aa6.6□□□□□ -1.35
RNU4-39P-201ENST00000362455 FGFR4P22455 802 aa6.6□□□□□ -1.35
RNU4-39P-201ENST00000362455 GABRB3P28472 473 aa6.6□□□□□ -1.35
RNU4-39P-201ENST00000362455 PPM1FP49593 454 aaPredicted RBP6.6□□□□□ -1.35
RNU4-39P-201ENST00000362455 SCNN1GP51170 649 aa6.6□□□□□ -1.35
RNU4-39P-201ENST00000362455 GALNT1Q10472 559 aaPredicted RBP6.6□□□□□ -1.35
RNU4-39P-201ENST00000362455 SLC15A2Q16348 729 aa6.6□□□□□ -1.35
RNU4-39P-201ENST00000362455 PFKFB4Q16877 469 aa6.6□□□□□ -1.35
RNU4-39P-201ENST00000362455 TXNRD1Q16881 649 aa6.6□□□□□ -1.35
RNU4-39P-201ENST00000362455 MAMDC4Q6UXC1 1216 aa6.6□□□□□ -1.35
RNU4-39P-201ENST00000362455 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.6□□□□□ -1.35
RNU4-39P-201ENST00000362455 CPXCR1Q8N123 301 aa6.6□□□□□ -1.35
RNU4-39P-201ENST00000362455 SPATA5Q8NB90 893 aa6.6□□□□□ -1.35
RNU4-39P-201ENST00000362455 GLIS1Q8NBF1 620 aa6.6□□□□□ -1.35
RNU4-39P-201ENST00000362455 ZSWIM1Q9BR11 485 aa6.6□□□□□ -1.35
RNU4-39P-201ENST00000362455 RNPEPQ9H4A4 650 aa6.6□□□□□ -1.35
RNU4-39P-201ENST00000362455 ZCCHC4Q9H5U6 513 aa6.6□□□□□ -1.35
RNU4-39P-201ENST00000362455 OBP2BQ9NPH6 170 aa6.6□□□□□ -1.35
RNU4-39P-201ENST00000362455 XPNPEP3Q9NQH7 507 aa6.6□□□□□ -1.35
RNU4-39P-201ENST00000362455 TM7SF3Q9NS93 570 aa6.6□□□□□ -1.35
RNU4-39P-201ENST00000362455 ZSCAN32Q9NX65 697 aa6.6□□□□□ -1.35
RNU4-39P-201ENST00000362455 CTTNBP2NLQ9P2B4 639 aa6.6□□□□□ -1.35
RNU4-39P-201ENST00000362455 EIF2B4Q9UI10 523 aaKnown RBP6.6□□□□□ -1.35
RNU4-39P-201ENST00000362455 ATP11BQ9Y2G3 1177 aa6.6□□□□□ -1.35
RNU4-39P-201ENST00000362455 LMO7Q8WWI1 1683 aa6.6□□□□□ -1.35
RNU4-39P-201ENST00000362455 NRKQ7Z2Y5 1582 aa6.6□□□□□ -1.35
RNU4-39P-201ENST00000362455 OVOS2A0A0G2JMS6 1433 aa6.59□□□□□ -1.35
RNU4-39P-201ENST00000362455 OVOS2A0A0J9YW53 1432 aa6.59□□□□□ -1.35
RNU4-39P-201ENST00000362455 BCL9O00512 1426 aa6.59□□□□□ -1.35
RNU4-39P-201ENST00000362455 OVOS2Q6IE36 1432 aa6.59□□□□□ -1.35
RNU4-39P-201ENST00000362455 ZNF185O15231 689 aa6.59□□□□□ -1.35
RNU4-39P-201ENST00000362455 CYP27B1O15528 508 aa6.59□□□□□ -1.35
RNU4-39P-201ENST00000362455 INMTO95050 263 aa6.59□□□□□ -1.35
RNU4-39P-201ENST00000362455 ATXN1LP0C7T5 689 aaKnown RBP6.59□□□□□ -1.35
RNU4-39P-201ENST00000362455 ACO1P21399 889 aaKnown RBP6.59□□□□□ -1.35
RNU4-39P-201ENST00000362455 PAX3P23760 479 aa6.59□□□□□ -1.35
RNU4-39P-201ENST00000362455 MAN2A2P49641 1150 aa6.59□□□□□ -1.35
RNU4-39P-201ENST00000362455 LILRA4P59901 499 aa6.59□□□□□ -1.35
RNU4-39P-201ENST00000362455 HSD11B2P80365 405 aa6.59□□□□□ -1.35
RNU4-39P-201ENST00000362455 ARHGEF7Q14155 803 aa6.59□□□□□ -1.35
RNU4-39P-201ENST00000362455 ZACNQ401N2 412 aa6.59□□□□□ -1.35
RNU4-39P-201ENST00000362455 PRR16Q569H4 304 aa6.59□□□□□ -1.35
RNU4-39P-201ENST00000362455 LDHAL6AQ6ZMR3 332 aa6.59□□□□□ -1.35
RNU4-39P-201ENST00000362455 TOM1L2Q6ZVM7 507 aa6.59□□□□□ -1.35
RNU4-39P-201ENST00000362455 ZNF280BQ86YH2 543 aa6.59□□□□□ -1.35
RNU4-39P-201ENST00000362455 ATG16L2Q8NAA4 619 aa6.59□□□□□ -1.35
RNU4-39P-201ENST00000362455 CCDC150Q8NCX0 1101 aa6.59□□□□□ -1.35
RNU4-39P-201ENST00000362455 POC1BQ8TC44 478 aa6.59□□□□□ -1.35
RNU4-39P-201ENST00000362455 Q8TCH9 128 aa6.59□□□□□ -1.35
RNU4-39P-201ENST00000362455 ZNF483Q8TF39 744 aaPredicted RBP6.59□□□□□ -1.35
RNU4-39P-201ENST00000362455 FAM89AQ96GI7 184 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms