RNA–Protein interactions for RNA: ENST00000357179.9

TOP3B-201, Transcript of DNA topoisomerase III beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3B, Length 2,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-201ENST00000357179 DENRO43583 198 aaKnown RBP15.29■□□□□ 0.04
TOP3B-201ENST00000357179 STK10O94804 968 aaKnown RBP15.29■□□□□ 0.04
TOP3B-201ENST00000357179 SLC5A2P31639 672 aa15.29■□□□□ 0.04
TOP3B-201ENST00000357179 HIRAP54198 1017 aaPredicted RBP15.29■□□□□ 0.04
TOP3B-201ENST00000357179 PEX3P56589 373 aa15.29■□□□□ 0.04
TOP3B-201ENST00000357179 HIC1Q14526 733 aa15.29■□□□□ 0.04
TOP3B-201ENST00000357179 TBCCQ15814 346 aa15.29■□□□□ 0.04
TOP3B-201ENST00000357179 AOC3Q16853 763 aa15.29■□□□□ 0.04
TOP3B-201ENST00000357179 LRRC8BQ6P9F7 803 aa15.29■□□□□ 0.04
TOP3B-201ENST00000357179 CENPUQ71F23 418 aa15.29■□□□□ 0.04
TOP3B-201ENST00000357179 C4orf19Q8IY42 314 aa15.29■□□□□ 0.04
TOP3B-201ENST00000357179 BBS5Q8N3I7 341 aa15.29■□□□□ 0.04
TOP3B-201ENST00000357179 SHKBP1Q8TBC3 707 aa15.29■□□□□ 0.04
TOP3B-201ENST00000357179 DHX38Q92620 1227 aaKnown RBP15.29■□□□□ 0.04
TOP3B-201ENST00000357179 HSPBAP1Q96EW2 488 aa15.29■□□□□ 0.04
TOP3B-201ENST00000357179 PAFAH2Q99487 392 aa15.29■□□□□ 0.04
TOP3B-201ENST00000357179 CCDC106Q9BWC9 280 aa15.29■□□□□ 0.04
TOP3B-201ENST00000357179 STRIP2Q9ULQ0 834 aa15.29■□□□□ 0.04
TOP3B-201ENST00000357179 TBX20Q9UMR3 447 aa15.29■□□□□ 0.04
TOP3B-201ENST00000357179 MYPNQ86TC9 1320 aa15.29■□□□□ 0.04
TOP3B-201ENST00000357179 ZNF646O15015 1829 aaPredicted RBP15.29■□□□□ 0.04
TOP3B-201ENST00000357179 TRMUO75648 421 aaKnown RBP15.29■□□□□ 0.04
TOP3B-201ENST00000357179 PORP16435 677 aaPredicted RBP15.29■□□□□ 0.04
TOP3B-201ENST00000357179 YWHABP31946 246 aaKnown RBP15.29■□□□□ 0.04
TOP3B-201ENST00000357179 NOP14P78316 857 aaKnown RBP15.29■□□□□ 0.04
TOP3B-201ENST00000357179 SNAPC2Q13487 334 aa15.29■□□□□ 0.04
TOP3B-201ENST00000357179 TLR1Q15399 786 aa15.29■□□□□ 0.04
TOP3B-201ENST00000357179 EAPPQ56P03 285 aaPredicted RBP15.29■□□□□ 0.04
TOP3B-201ENST00000357179 PRPF39Q86UA1 669 aaKnown RBP15.29■□□□□ 0.04
TOP3B-201ENST00000357179 OGFOD1Q8N543 542 aa15.29■□□□□ 0.04
TOP3B-201ENST00000357179 ICA1LQ8NDH6 482 aa15.29■□□□□ 0.04
TOP3B-201ENST00000357179 CCDC127Q96BQ5 260 aa15.29■□□□□ 0.04
TOP3B-201ENST00000357179 SOX13Q9UN79 622 aa15.29■□□□□ 0.04
TOP3B-201ENST00000357179 PCDHB2Q9Y5E7 798 aa15.29■□□□□ 0.04
TOP3B-201ENST00000357179 CLUHO75153 1309 aa15.29■□□□□ 0.04
TOP3B-201ENST00000357179 ATP2A1O14983 1001 aa15.28■□□□□ 0.04
TOP3B-201ENST00000357179 CCNT2O60583 730 aaKnown RBP15.28■□□□□ 0.04
TOP3B-201ENST00000357179 LPXNO60711 386 aa15.28■□□□□ 0.04
TOP3B-201ENST00000357179 GSTM4Q03013 218 aa15.28■□□□□ 0.04
TOP3B-201ENST00000357179 CCNIQ14094 377 aa15.28■□□□□ 0.04
TOP3B-201ENST00000357179 TRIP10Q15642 601 aa15.28■□□□□ 0.04
TOP3B-201ENST00000357179 LDHDQ86WU2 507 aa15.28■□□□□ 0.04
TOP3B-201ENST00000357179 HOMEZQ8IX15 550 aa15.28■□□□□ 0.04
TOP3B-201ENST00000357179 EXD1Q8NHP7 514 aa15.28■□□□□ 0.04
TOP3B-201ENST00000357179 CSRNP1Q96S65 589 aa15.28■□□□□ 0.04
TOP3B-201ENST00000357179 GRIP2Q9C0E4 1043 aa15.28■□□□□ 0.04
TOP3B-201ENST00000357179 AGO4Q9HCK5 861 aaKnown RBP15.28■□□□□ 0.04
TOP3B-201ENST00000357179 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.28■□□□□ 0.048e-7■■■■■ 107.1
TOP3B-201ENST00000357179 RGPD3A6NKT7 1758 aaPredicted RBP15.28■□□□□ 0.04
TOP3B-201ENST00000357179 RGPD4Q7Z3J3 1758 aa15.28■□□□□ 0.04
TOP3B-201ENST00000357179 DENND3A2RUS2 1198 aa15.28■□□□□ 0.04
TOP3B-201ENST00000357179 BOLA2-SMG1P6H3BVE0 249 aa15.28■□□□□ 0.04
TOP3B-201ENST00000357179 CD48P09326 243 aa15.28■□□□□ 0.04
TOP3B-201ENST00000357179 KRT5P13647 590 aa15.28■□□□□ 0.04
TOP3B-201ENST00000357179 FDFT1P37268 417 aa15.28■□□□□ 0.04
TOP3B-201ENST00000357179 MLH1P40692 756 aa15.28■□□□□ 0.04
TOP3B-201ENST00000357179 PPIDQ08752 370 aaKnown RBP15.28■□□□□ 0.04
TOP3B-201ENST00000357179 SLC27A3Q5K4L6 730 aa15.28■□□□□ 0.04
TOP3B-201ENST00000357179 Q6ZNX1 250 aa15.28■□□□□ 0.04
TOP3B-201ENST00000357179 TSHZ1Q6ZSZ6 1077 aa15.28■□□□□ 0.04
TOP3B-201ENST00000357179 SV2AQ7L0J3 742 aa15.28■□□□□ 0.04
TOP3B-201ENST00000357179 TMEM161BQ8NDZ6 487 aa15.28■□□□□ 0.04
TOP3B-201ENST00000357179 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.28■□□□□ 0.04
TOP3B-201ENST00000357179 ACER1Q8TDN7 264 aa15.28■□□□□ 0.04
TOP3B-201ENST00000357179 SLC26A7Q8TE54 656 aa15.28■□□□□ 0.04
TOP3B-201ENST00000357179 JADE3Q92613 823 aa15.28■□□□□ 0.04
TOP3B-201ENST00000357179 TTC17Q96AE7 1141 aa15.28■□□□□ 0.04
TOP3B-201ENST00000357179 CORO1BQ9BR76 489 aa15.28■□□□□ 0.04
TOP3B-201ENST00000357179 UBIAD1Q9Y5Z9 338 aa15.28■□□□□ 0.04
TOP3B-201ENST00000357179 ZSCAN5DPP0CG00 497 aa15.27■□□□□ 0.04
TOP3B-201ENST00000357179 IRX4P78413 519 aa15.27■□□□□ 0.04
TOP3B-201ENST00000357179 CYP24A1Q07973 514 aa15.27■□□□□ 0.04
TOP3B-201ENST00000357179 TFDP1Q14186 410 aa15.27■□□□□ 0.04
TOP3B-201ENST00000357179 LPIN1Q14693 890 aa15.27■□□□□ 0.04
TOP3B-201ENST00000357179 RNASEH2BQ5TBB1 312 aaKnown RBP15.27■□□□□ 0.04
TOP3B-201ENST00000357179 DRICH1Q6PGQ1 229 aaPredicted RBP15.27■□□□□ 0.04
TOP3B-201ENST00000357179 DCAKDQ8WVC6 231 aa15.27■□□□□ 0.04
TOP3B-201ENST00000357179 VCPIP1Q96JH7 1222 aa15.27■□□□□ 0.04
TOP3B-201ENST00000357179 FAM111AQ96PZ2 611 aa15.27■□□□□ 0.04
TOP3B-201ENST00000357179 WWP1Q9H0M0 922 aa15.27■□□□□ 0.04
TOP3B-201ENST00000357179 ACSS3Q9H6R3 686 aa15.27■□□□□ 0.04
TOP3B-201ENST00000357179 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.27■□□□□ 0.04
TOP3B-201ENST00000357179 ANKEF1Q9NU02 776 aa15.27■□□□□ 0.04
TOP3B-201ENST00000357179 TBC1D22BQ9NU19 505 aa15.27■□□□□ 0.04
TOP3B-201ENST00000357179 SHOC2Q9UQ13 582 aa15.27■□□□□ 0.04
TOP3B-201ENST00000357179 ZNF711Q9Y462 761 aa15.27■□□□□ 0.04
TOP3B-201ENST00000357179 KANSL1LA0AUZ9 987 aa15.27■□□□□ 0.03
TOP3B-201ENST00000357179 TTLL13PA6NNM8 815 aa15.27■□□□□ 0.03
TOP3B-201ENST00000357179 PDE5AO76074 875 aa15.27■□□□□ 0.03
TOP3B-201ENST00000357179 PHBP35232 272 aa15.27■□□□□ 0.03
TOP3B-201ENST00000357179 NSFP46459 744 aaKnown RBP15.27■□□□□ 0.03
TOP3B-201ENST00000357179 ARSEP51690 589 aa15.27■□□□□ 0.03
TOP3B-201ENST00000357179 KLHL38Q2WGJ6 581 aa15.27■□□□□ 0.03
TOP3B-201ENST00000357179 LIN9Q5TKA1 542 aa15.27■□□□□ 0.03
TOP3B-201ENST00000357179 PPP1R2P3Q6NXS1 205 aa15.27■□□□□ 0.03
TOP3B-201ENST00000357179 TRIM72Q6ZMU5 477 aa15.27■□□□□ 0.03
TOP3B-201ENST00000357179 MON1BQ7L1V2 547 aa15.27■□□□□ 0.03
TOP3B-201ENST00000357179 TDRD3Q9H7E2 651 aaKnown RBP15.27■□□□□ 0.03
TOP3B-201ENST00000357179 ZNF696Q9H7X3 374 aa15.27■□□□□ 0.03
TOP3B-201ENST00000357179 UBAP1Q9NZ09 502 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 176 ms