RNA–Protein interactions for RNA: ENST00000308394.8

CASP3-201, Transcript of caspase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASP3, Length 2,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP3-201ENST00000308394 TRIM43BA6NCK2 446 aa11.28□□□□□ -0.6
CASP3-201ENST00000308394 PIK3R2O00459 728 aa11.28□□□□□ -0.6
CASP3-201ENST00000308394 NEBLO76041 1014 aa11.28□□□□□ -0.6
CASP3-201ENST00000308394 GJB6O95452 261 aa11.28□□□□□ -0.6
CASP3-201ENST00000308394 ITGB8P26012 769 aa11.28□□□□□ -0.6
CASP3-201ENST00000308394 MAMLD1Q13495 774 aa11.28□□□□□ -0.6
CASP3-201ENST00000308394 PTPN20Q4JDL3 420 aa11.28□□□□□ -0.6
CASP3-201ENST00000308394 CNKSR3Q6P9H4 555 aa11.28□□□□□ -0.6
CASP3-201ENST00000308394 PACS1Q6VY07 963 aa11.28□□□□□ -0.6
CASP3-201ENST00000308394 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.28□□□□□ -0.6
CASP3-201ENST00000308394 SLFN11Q7Z7L1 901 aa11.28□□□□□ -0.6
CASP3-201ENST00000308394 NT5DC3Q86UY8 548 aa11.28□□□□□ -0.6
CASP3-201ENST00000308394 METTL23Q86XA0 190 aa11.28□□□□□ -0.6
CASP3-201ENST00000308394 COLGALT2Q8IYK4 626 aa11.28□□□□□ -0.6
CASP3-201ENST00000308394 MSANTD4Q8NCY6 345 aa11.28□□□□□ -0.6
CASP3-201ENST00000308394 TET1Q8NFU7 2136 aa11.28□□□□□ -0.6
CASP3-201ENST00000308394 TRIM43Q96BQ3 446 aaPredicted RBP11.28□□□□□ -0.6
CASP3-201ENST00000308394 C18orf8Q96DM3 657 aa11.28□□□□□ -0.6
CASP3-201ENST00000308394 CASD1Q96PB1 797 aa11.28□□□□□ -0.6
CASP3-201ENST00000308394 CPXM1Q96SM3 734 aa11.28□□□□□ -0.6
CASP3-201ENST00000308394 ZMAT5Q9UDW3 170 aaKnown RBP11.28□□□□□ -0.6
CASP3-201ENST00000308394 TBK1Q9UHD2 729 aa11.28□□□□□ -0.6
CASP3-201ENST00000308394 ACAD8Q9UKU7 415 aa11.28□□□□□ -0.6
CASP3-201ENST00000308394 ALG6Q9Y672 507 aa11.28□□□□□ -0.6
CASP3-201ENST00000308394 TDRD15B5MCY1 1934 aaKnown RBP11.28□□□□□ -0.6
CASP3-201ENST00000308394 TBKBP1A7MCY6 615 aa11.28□□□□□ -0.6
CASP3-201ENST00000308394 MYO1FO00160 1098 aa11.28□□□□□ -0.6
CASP3-201ENST00000308394 GABRDO14764 452 aa11.28□□□□□ -0.6
CASP3-201ENST00000308394 TIMP1P01033 207 aa11.28□□□□□ -0.6
CASP3-201ENST00000308394 MSL3P1P0C860 447 aa11.28□□□□□ -0.6
CASP3-201ENST00000308394 CSF2RAP15509 400 aa11.28□□□□□ -0.6
CASP3-201ENST00000308394 TCP1P17987 556 aaKnown RBP11.28□□□□□ -0.6
CASP3-201ENST00000308394 PTPN1P18031 435 aaKnown RBP11.28□□□□□ -0.6
CASP3-201ENST00000308394 EN2P19622 333 aaPredicted RBP11.28□□□□□ -0.6
CASP3-201ENST00000308394 AARSP49588 968 aaKnown RBP eCLIP11.28□□□□□ -0.6
CASP3-201ENST00000308394 DSC1Q08554 894 aa11.28□□□□□ -0.6
CASP3-201ENST00000308394 PDCLQ13371 301 aa11.28□□□□□ -0.6
CASP3-201ENST00000308394 DNAJC24Q6P3W2 148 aa11.28□□□□□ -0.6
CASP3-201ENST00000308394 SLC2A14Q8TDB8 520 aa11.28□□□□□ -0.6
CASP3-201ENST00000308394 ZFPM2Q8WW38 1151 aa11.28□□□□□ -0.6
CASP3-201ENST00000308394 TRPV5Q9NQA5 729 aa11.28□□□□□ -0.6
CASP3-201ENST00000308394 TJP2Q9UDY2 1190 aa11.28□□□□□ -0.6
CASP3-201ENST00000308394 STRIP2Q9ULQ0 834 aa11.28□□□□□ -0.6
CASP3-201ENST00000308394 GOLGA8SH3BPF8 625 aa11.27□□□□□ -0.6
CASP3-201ENST00000308394 KCNK3O14649 394 aa11.27□□□□□ -0.6
CASP3-201ENST00000308394 TADA2AO75478 443 aa11.27□□□□□ -0.6
CASP3-201ENST00000308394 RNASEH2AO75792 299 aaKnown RBP11.27□□□□□ -0.6
CASP3-201ENST00000308394 MAN1A1P33908 653 aa11.27□□□□□ -0.6
CASP3-201ENST00000308394 RFC2P35250 354 aa11.27□□□□□ -0.6
CASP3-201ENST00000308394 RGS7P49802 495 aa11.27□□□□□ -0.6
CASP3-201ENST00000308394 PLEKHA7Q6IQ23 1121 aa11.27□□□□□ -0.6
CASP3-201ENST00000308394 DCUN1D2Q6PH85 259 aa11.27□□□□□ -0.6
CASP3-201ENST00000308394 CD300LGQ6UXG3 332 aa11.27□□□□□ -0.6
CASP3-201ENST00000308394 NPAS4Q8IUM7 802 aa11.27□□□□□ -0.6
CASP3-201ENST00000308394 COG1Q8WTW3 980 aa11.27□□□□□ -0.6
CASP3-201ENST00000308394 NELL1Q92832 810 aa11.27□□□□□ -0.6
CASP3-201ENST00000308394 SPOPO43791 374 aa11.27□□□□□ -0.61
CASP3-201ENST00000308394 ALDH2P05091 517 aa11.27□□□□□ -0.61
CASP3-201ENST00000308394 PRLRP16471 622 aa11.27□□□□□ -0.61
CASP3-201ENST00000308394 COMTP21964 271 aa11.27□□□□□ -0.61
CASP3-201ENST00000308394 HNRNPH2P55795 449 aaKnown RBP11.27□□□□□ -0.61
CASP3-201ENST00000308394 EIF2B5Q13144 721 aaKnown RBP11.27□□□□□ -0.61
CASP3-201ENST00000308394 CCDC142Q17RM4 750 aa11.27□□□□□ -0.61
CASP3-201ENST00000308394 WHAMMP3Q1A5X7 153 aa11.27□□□□□ -0.61
CASP3-201ENST00000308394 MDH1BQ5I0G3 518 aa11.27□□□□□ -0.61
CASP3-201ENST00000308394 ARHGAP17Q68EM7 881 aa11.27□□□□□ -0.61
CASP3-201ENST00000308394 C11orf63Q6NUN7 778 aa11.27□□□□□ -0.61
CASP3-201ENST00000308394 CCBE1Q6UXH8 406 aaPredicted RBP11.27□□□□□ -0.61
CASP3-201ENST00000308394 PAF1Q8N7H5 531 aa11.27□□□□□ -0.61
CASP3-201ENST00000308394 LRRN4CLQ8ND94 238 aa11.27□□□□□ -0.61
CASP3-201ENST00000308394 FEZF2Q8TBJ5 459 aa11.27□□□□□ -0.61
CASP3-201ENST00000308394 MCEEQ96PE7 176 aa11.27□□□□□ -0.61
CASP3-201ENST00000308394 MED10Q9BTT4 135 aa11.27□□□□□ -0.61
CASP3-201ENST00000308394 SELENOOQ9BVL4 669 aa11.27□□□□□ -0.61
CASP3-201ENST00000308394 NRDE2Q9H7Z3 1164 aa11.27□□□□□ -0.61
CASP3-201ENST00000308394 ABCB6Q9NP58 842 aa11.27□□□□□ -0.61
CASP3-201ENST00000308394 DCAF16Q9NXF7 216 aa11.27□□□□□ -0.61
CASP3-201ENST00000308394 CLDN5O00501 218 aa11.26□□□□□ -0.61
CASP3-201ENST00000308394 ERBB2P04626 1255 aa11.26□□□□□ -0.61
CASP3-201ENST00000308394 PFKMP08237 780 aa11.26□□□□□ -0.61
CASP3-201ENST00000308394 RPL7AP62424 266 aaKnown RBP11.26□□□□□ -0.61
CASP3-201ENST00000308394 KIAA0319Q5VV43 1072 aa11.26□□□□□ -0.61
CASP3-201ENST00000308394 CEP112Q8N8E3 955 aa11.26□□□□□ -0.61
CASP3-201ENST00000308394 ANKRD52Q8NB46 1076 aa11.26□□□□□ -0.61
CASP3-201ENST00000308394 TBC1D31Q96DN5 1066 aa11.26□□□□□ -0.61
CASP3-201ENST00000308394 SUSD3Q96L08 255 aa11.26□□□□□ -0.61
CASP3-201ENST00000308394 SYT15Q9BQS2 421 aa11.26□□□□□ -0.61
CASP3-201ENST00000308394 TANC1Q9C0D5 1861 aa11.26□□□□□ -0.61
CASP3-201ENST00000308394 C6orf203Q9P0P8 240 aaPredicted RBP11.26□□□□□ -0.61
CASP3-201ENST00000308394 HCSTQ9UBK5 93 aa11.26□□□□□ -0.61
CASP3-201ENST00000308394 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.26□□□□□ -0.61
CASP3-201ENST00000308394 DSEQ9UL01 958 aa11.26□□□□□ -0.61
CASP3-201ENST00000308394 LINC00854A0A1B0GVQ3 168 aa11.26□□□□□ -0.61
CASP3-201ENST00000308394 ARHGEF37A1IGU5 675 aa11.26□□□□□ -0.61
CASP3-201ENST00000308394 M0QZQ0 153 aa11.26□□□□□ -0.61
CASP3-201ENST00000308394 NRP1O14786 923 aa11.26□□□□□ -0.61
CASP3-201ENST00000308394 CCDC159P0C7I6 412 aa11.26□□□□□ -0.61
CASP3-201ENST00000308394 PCSK1P29120 753 aa11.26□□□□□ -0.61
CASP3-201ENST00000308394 BST2Q10589 180 aaKnown RBP11.26□□□□□ -0.61
CASP3-201ENST00000308394 OVOS1Q6IE37 1185 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms