RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 FHL3Q13643 280 aa5.29□□□□□ -1.56
CCDC54-201ENST00000261058 STARD3Q14849 445 aa5.29□□□□□ -1.56
CCDC54-201ENST00000261058 MAPKAPK3Q16644 382 aa5.29□□□□□ -1.56
CCDC54-201ENST00000261058 NBPF8Q3BBV2 869 aa5.29□□□□□ -1.56
CCDC54-201ENST00000261058 ARL6IP4Q66PJ3 421 aaKnown RBP5.29□□□□□ -1.56
CCDC54-201ENST00000261058 RAP1GAP2Q684P5 730 aa5.29□□□□□ -1.56
CCDC54-201ENST00000261058 PGBD2Q6P3X8 592 aa5.29□□□□□ -1.56
CCDC54-201ENST00000261058 Q6YL49 198 aa5.29□□□□□ -1.56
CCDC54-201ENST00000261058 CCDC28AQ8IWP9 274 aa5.29□□□□□ -1.56
CCDC54-201ENST00000261058 ULK2Q8IYT8 1036 aa5.29□□□□□ -1.56
CCDC54-201ENST00000261058 SPARTQ8N0X7 666 aa5.29□□□□□ -1.56
CCDC54-201ENST00000261058 SOCS4Q8WXH5 440 aa5.29□□□□□ -1.56
CCDC54-201ENST00000261058 RFKQ969G6 155 aa5.29□□□□□ -1.56
CCDC54-201ENST00000261058 RSPRY1Q96DX4 576 aa5.29□□□□□ -1.56
CCDC54-201ENST00000261058 POLR3GLQ9BT43 218 aa5.29□□□□□ -1.56
CCDC54-201ENST00000261058 DNAJB11Q9UBS4 358 aa5.29□□□□□ -1.56
CCDC54-201ENST00000261058 SH2B3Q9UQQ2 575 aa5.29□□□□□ -1.56
CCDC54-201ENST00000261058 HPSEQ9Y251 543 aa5.29□□□□□ -1.56
CCDC54-201ENST00000261058 AGPSO00116 658 aa5.28□□□□□ -1.56
CCDC54-201ENST00000261058 NPC1O15118 1278 aa5.28□□□□□ -1.56
CCDC54-201ENST00000261058 ERBB2P04626 1255 aa5.28□□□□□ -1.56
CCDC54-201ENST00000261058 RHOP08100 348 aa5.28□□□□□ -1.56
CCDC54-201ENST00000261058 PDHA1P08559 390 aa5.28□□□□□ -1.56
CCDC54-201ENST00000261058 ICA1Q05084 483 aa5.28□□□□□ -1.56
CCDC54-201ENST00000261058 PTPAQ15257 358 aa5.28□□□□□ -1.56
CCDC54-201ENST00000261058 PUM3Q15397 648 aaKnown RBP5.28□□□□□ -1.56
CCDC54-201ENST00000261058 TEDDM1Q5T9Z0 273 aa5.28□□□□□ -1.56
CCDC54-201ENST00000261058 Q6ZNX1 250 aa5.28□□□□□ -1.56
CCDC54-201ENST00000261058 TSHZ1Q6ZSZ6 1077 aa5.28□□□□□ -1.56
CCDC54-201ENST00000261058 USP49Q70CQ1 688 aa5.28□□□□□ -1.56
CCDC54-201ENST00000261058 MAVSQ7Z434 540 aa5.28□□□□□ -1.56
CCDC54-201ENST00000261058 EXOC8Q8IYI6 725 aa5.28□□□□□ -1.56
CCDC54-201ENST00000261058 IZUMO1Q8IYV9 350 aa5.28□□□□□ -1.56
CCDC54-201ENST00000261058 NKAPQ8N5F7 415 aaKnown RBP5.28□□□□□ -1.56
CCDC54-201ENST00000261058 ZNF527Q8NB42 609 aa5.28□□□□□ -1.56
CCDC54-201ENST00000261058 CCDC150Q8NCX0 1101 aa5.28□□□□□ -1.56
CCDC54-201ENST00000261058 TMEM171Q8WVE6 324 aa5.28□□□□□ -1.56
CCDC54-201ENST00000261058 OSCP1Q8WVF1 389 aa5.28□□□□□ -1.56
CCDC54-201ENST00000261058 AIFM2Q9BRQ8 373 aa5.28□□□□□ -1.56
CCDC54-201ENST00000261058 PCDHAC1Q9H158 963 aa5.28□□□□□ -1.56
CCDC54-201ENST00000261058 IGSF9Q9P2J2 1179 aa5.28□□□□□ -1.56
CCDC54-201ENST00000261058 ZMYND8Q9ULU4 1186 aaPredicted RBP5.28□□□□□ -1.56
CCDC54-201ENST00000261058 CA14Q9ULX7 337 aa5.28□□□□□ -1.56
CCDC54-201ENST00000261058 REXO2Q9Y3B8 237 aaKnown RBP5.28□□□□□ -1.56
CCDC54-201ENST00000261058 EPN1Q9Y6I3 576 aaPredicted RBP5.28□□□□□ -1.56
CCDC54-201ENST00000261058 COL15A1P39059 1388 aa5.28□□□□□ -1.56
CCDC54-201ENST00000261058 LOC102724159A0A0B4J2E5 919 aa5.27□□□□□ -1.57
CCDC54-201ENST00000261058 NPIPB8E9PQR5 432 aa5.27□□□□□ -1.57
CCDC54-201ENST00000261058 SLC16A3O15427 465 aaKnown RBP5.27□□□□□ -1.57
CCDC54-201ENST00000261058 DHHO43323 396 aa5.27□□□□□ -1.57
CCDC54-201ENST00000261058 ZNF202O95125 648 aa5.27□□□□□ -1.57
CCDC54-201ENST00000261058 IDEP14735 1019 aa5.27□□□□□ -1.57
CCDC54-201ENST00000261058 EPHA3P29320 983 aa5.27□□□□□ -1.57
CCDC54-201ENST00000261058 MPLP40238 635 aa5.27□□□□□ -1.57
CCDC54-201ENST00000261058 ITGA8P53708 1063 aa5.27□□□□□ -1.57
CCDC54-201ENST00000261058 PTK2BQ14289 1009 aa5.27□□□□□ -1.57
CCDC54-201ENST00000261058 SPARCL1Q14515 664 aa5.27□□□□□ -1.57
CCDC54-201ENST00000261058 DHX8Q14562 1220 aaKnown RBP5.27□□□□□ -1.57
CCDC54-201ENST00000261058 PWP2Q15269 919 aaKnown RBP5.27□□□□□ -1.57
CCDC54-201ENST00000261058 TXNRD1Q16881 649 aa5.27□□□□□ -1.57
CCDC54-201ENST00000261058 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.27□□□□□ -1.57
CCDC54-201ENST00000261058 TMTC4Q5T4D3 741 aa5.27□□□□□ -1.57
CCDC54-201ENST00000261058 ZNF618Q5T7W0 954 aa5.27□□□□□ -1.57
CCDC54-201ENST00000261058 FAXCQ5TGI0 409 aa5.27□□□□□ -1.57
CCDC54-201ENST00000261058 ABLIM2Q6H8Q1 611 aa5.27□□□□□ -1.57
CCDC54-201ENST00000261058 FBXO38Q6PIJ6 1188 aa5.27□□□□□ -1.57
CCDC54-201ENST00000261058 Q8N1X5 172 aa5.27□□□□□ -1.57
CCDC54-201ENST00000261058 MBD3L2Q8NHZ7 208 aaPredicted RBP5.27□□□□□ -1.57
CCDC54-201ENST00000261058 FKBP10Q96AY3 582 aa5.27□□□□□ -1.57
CCDC54-201ENST00000261058 PBKQ96KB5 322 aa5.27□□□□□ -1.57
CCDC54-201ENST00000261058 WDR24Q96S15 920 aa5.27□□□□□ -1.57
CCDC54-201ENST00000261058 C17orf80Q9BSJ5 609 aa5.27□□□□□ -1.57
CCDC54-201ENST00000261058 VN1R3Q9BXE9 311 aa5.27□□□□□ -1.57
CCDC54-201ENST00000261058 SLC25A32Q9H2D1 315 aa5.27□□□□□ -1.57
CCDC54-201ENST00000261058 MYH16Q9H6N6 1097 aa5.27□□□□□ -1.57
CCDC54-201ENST00000261058 CASS4Q9NQ75 786 aa5.27□□□□□ -1.57
CCDC54-201ENST00000261058 TRIM36Q9NQ86 728 aa5.27□□□□□ -1.57
CCDC54-201ENST00000261058 TESQ9UGI8 421 aaKnown RBP5.27□□□□□ -1.57
CCDC54-201ENST00000261058 GABRQQ9UN88 632 aa5.27□□□□□ -1.57
CCDC54-201ENST00000261058 DTNAQ9Y4J8 743 aa5.27□□□□□ -1.57
CCDC54-201ENST00000261058 A1L4Q6 167 aa5.26□□□□□ -1.57
CCDC54-201ENST00000261058 SYT5O00445 386 aa5.26□□□□□ -1.57
CCDC54-201ENST00000261058 RGS10O43665 173 aa5.26□□□□□ -1.57
CCDC54-201ENST00000261058 CBFA2T3O75081 653 aa5.26□□□□□ -1.57
CCDC54-201ENST00000261058 SKAP2O75563 359 aaPredicted RBP5.26□□□□□ -1.57
CCDC54-201ENST00000261058 CSTBP04080 98 aaKnown RBP5.26□□□□□ -1.57
CCDC54-201ENST00000261058 ITGA5P08648 1049 aa5.26□□□□□ -1.57
CCDC54-201ENST00000261058 IL6RP08887 468 aaPredicted RBP5.26□□□□□ -1.57
CCDC54-201ENST00000261058 HKR1P10072 659 aa5.26□□□□□ -1.57
CCDC54-201ENST00000261058 HGFP14210 728 aa5.26□□□□□ -1.57
CCDC54-201ENST00000261058 PRKAR1BP31321 381 aa5.26□□□□□ -1.57
CCDC54-201ENST00000261058 HTR7P34969 479 aa5.26□□□□□ -1.57
CCDC54-201ENST00000261058 ADRA1BP35368 520 aa5.26□□□□□ -1.57
CCDC54-201ENST00000261058 PGDP52209 483 aa5.26□□□□□ -1.57
CCDC54-201ENST00000261058 SEC24CP53992 1094 aa5.26□□□□□ -1.57
CCDC54-201ENST00000261058 TIRAPP58753 221 aa5.26□□□□□ -1.57
CCDC54-201ENST00000261058 NSUN2Q08J23 767 aaKnown RBP eCLIP5.26□□□□□ -1.57
CCDC54-201ENST00000261058 FOXO1Q12778 655 aa5.26□□□□□ -1.57
CCDC54-201ENST00000261058 CLCA4Q14CN2 919 aa5.26□□□□□ -1.57
CCDC54-201ENST00000261058 ZACNQ401N2 412 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms