RNA–Protein interactions for RNA: YPR088C

SRP54, Transcript of Signal recognition particle (SRP) subunit (homolog of mammalian SRP54), yeastyeast

Gene SRP54, Length 1,626 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP54YPR088C YMR103CQ04436 120 aa6.11□□□□□ -1.43
SRP54YPR088C UBC5P15732 148 aa6.1□□□□□ -1.43
SRP54YPR088C URM1P40554 99 aaPredicted RBP6.1□□□□□ -1.43
SRP54YPR088C YJR146WP47174 117 aa6.1□□□□□ -1.43
SRP54YPR088C YGL230CP53074 147 aa6.1□□□□□ -1.43
SRP54YPR088C PKR1Q03880 122 aaKnown RBP6.1□□□□□ -1.43
SRP54YPR088C SCS22Q6Q595 175 aa6.1□□□□□ -1.43
SRP54YPR088C RPL16AP26784 199 aaKnown RBP6.1□□□□□ -1.43
SRP54YPR088C AUA1P32450 94 aa6.1□□□□□ -1.43
SRP54YPR088C SCW10Q04951 389 aa6.1□□□□□ -1.43
SRP54YPR088C YDL157CQ12082 118 aa6.1□□□□□ -1.43
SRP54YPR088C COA3Q3E7B2 85 aa6.1□□□□□ -1.43
SRP54YPR088C NAT5Q08689 176 aa6.09□□□□□ -1.43
SRP54YPR088C TRP1P00912 224 aa6.08□□□□□ -1.44
SRP54YPR088C ATP5P09457 212 aa6.08□□□□□ -1.44
SRP54YPR088C YCR007CP25354 239 aa6.08□□□□□ -1.44
SRP54YPR088C MRP49P32388 137 aa6.08□□□□□ -1.44
SRP54YPR088C YPT53P36019 220 aa6.08□□□□□ -1.44
SRP54YPR088C MSL1P40567 111 aaPredicted RBP6.08□□□□□ -1.44
SRP54YPR088C ADH2P00331 348 aaKnown RBP6.07□□□□□ -1.44
SRP54YPR088C BET5Q03630 159 aa6.07□□□□□ -1.44
SRP54YPR088C ISU2Q12056 156 aa6.07□□□□□ -1.44
SRP54YPR088C YDL085C-AQ3E7B7 68 aaKnown RBP6.07□□□□□ -1.44
SRP54YPR088C YKL070WP36087 169 aa6.07□□□□□ -1.44
SRP54YPR088C YBR209WP38311 105 aa6.07□□□□□ -1.44
SRP54YPR088C HAL1Q01766 294 aa6.07□□□□□ -1.44
SRP54YPR088C CRC1Q12289 327 aa6.07□□□□□ -1.44
SRP54YPR088C AIM29P36154 155 aa6.06□□□□□ -1.44
SRP54YPR088C RPL31AP0C2H8 113 aaKnown RBP6.05□□□□□ -1.44
SRP54YPR088C YRA2P36036 203 aaKnown RBP RIP-Chip data6.05□□□□□ -1.44not detected
SRP54YPR088C YKL044WP36092 106 aa6.05□□□□□ -1.44
SRP54YPR088C ARC15P40518 154 aaRIP-Chip data6.05□□□□□ -1.44not detected
SRP54YPR088C YGL088WP53151 121 aa6.05□□□□□ -1.44
SRP54YPR088C ERI1P62651 68 aaKnown RBP6.05□□□□□ -1.44
SRP54YPR088C SAE3P89114 91 aa6.05□□□□□ -1.44
SRP54YPR088C LSO2Q3E772 92 aaKnown RBP6.05□□□□□ -1.44
SRP54YPR088C YMR122W-AQ3E842 84 aa6.05□□□□□ -1.44
SRP54YPR088C YIL059CP40520 121 aa6.04□□□□□ -1.44
SRP54YPR088C YCL021W-AQ96VH3 125 aa6.03□□□□□ -1.44
SRP54YPR088C YEL008WP40001 126 aa6.02□□□□□ -1.45
SRP54YPR088C YPL261CQ08976 102 aa6.02□□□□□ -1.45
SRP54YPR088C ATP15P21306 62 aa6.01□□□□□ -1.45
SRP54YPR088C PAU23Q07987 124 aa6.01□□□□□ -1.45
SRP54YPR088C PAU17Q12370 124 aa6.01□□□□□ -1.45
SRP54YPR088C DFM1Q12743 341 aaKnown RBP6.01□□□□□ -1.45
SRP54YPR088C RPL32P38061 130 aaKnown RBP5.99□□□□□ -1.45
SRP54YPR088C YPL073CP40323 161 aa5.99□□□□□ -1.45
SRP54YPR088C SPC1P46965 94 aa5.99□□□□□ -1.45
SRP54YPR088C AIM11P87275 137 aa5.99□□□□□ -1.45
SRP54YPR088C YDL022C-AP0C5L6 82 aa5.99□□□□□ -1.45
SRP54YPR088C RPS8AP0CX39 200 aaKnown RBP5.98□□□□□ -1.45
SRP54YPR088C RPS8BP0CX40 200 aaKnown RBP5.98□□□□□ -1.45
SRP54YPR088C YKR041WP36134 250 aa5.98□□□□□ -1.45
SRP54YPR088C YER085CP40058 173 aa5.98□□□□□ -1.45
SRP54YPR088C YLR194CQ05777 254 aa5.98□□□□□ -1.45
SRP54YPR088C YAR029WP39549 74 aa5.97□□□□□ -1.45
SRP54YPR088C GLC8P41818 229 aa5.97□□□□□ -1.45
SRP54YPR088C ERG28P40030 148 aa5.96□□□□□ -1.45
SRP54YPR088C YPR010C-AA5Z2X5 72 aa5.96□□□□□ -1.46
SRP54YPR088C STF1P01098 86 aa5.96□□□□□ -1.46
SRP54YPR088C RPL33AP05744 107 aaKnown RBP5.96□□□□□ -1.46
SRP54YPR088C RPL33BP41056 107 aaKnown RBP5.96□□□□□ -1.46
SRP54YPR088C PEX17P40155 199 aa5.95□□□□□ -1.46
SRP54YPR088C RPR2P40571 144 aa5.95□□□□□ -1.46
SRP54YPR088C SHU1P38751 150 aa5.94□□□□□ -1.46
SRP54YPR088C RPF1P38805 295 aaKnown RBP5.94□□□□□ -1.46
SRP54YPR088C YEL067CP39978 195 aa5.94□□□□□ -1.46
SRP54YPR088C ENV10Q99382 181 aa5.94□□□□□ -1.46
SRP54YPR088C IGO2Q9P305 131 aa5.94□□□□□ -1.46
SRP54YPR088C HAP3P13434 144 aa5.93□□□□□ -1.46
SRP54YPR088C YBR219CP38317 127 aa5.93□□□□□ -1.46
SRP54YPR088C YNR077CP53758 84 aa5.93□□□□□ -1.46
SRP54YPR088C YMR295CQ03559 197 aa5.93□□□□□ -1.46
SRP54YPR088C YMR320WQ04897 101 aa5.93□□□□□ -1.46
SRP54YPR088C RPL18AP0CX49 186 aaKnown RBP5.92□□□□□ -1.46
SRP54YPR088C RPL18BP0CX50 186 aaKnown RBP5.92□□□□□ -1.46
SRP54YPR088C YLR363W-AQ3E747 85 aa5.92□□□□□ -1.46
SRP54YPR088C YLL066W-BQ8TGJ7 56 aa5.92□□□□□ -1.46
SRP54YPR088C CIN5P40917 295 aa5.92□□□□□ -1.46
SRP54YPR088C PBA1Q05778 276 aa5.92□□□□□ -1.46
SRP54YPR088C YML079WQ03629 201 aa5.91□□□□□ -1.46
SRP54YPR088C RTC6O14464 93 aa5.9□□□□□ -1.46
SRP54YPR088C QCR8P08525 94 aa5.9□□□□□ -1.46
SRP54YPR088C MRPS12P53732 153 aa5.9□□□□□ -1.46
SRP54YPR088C CWC27Q02770 301 aa5.9□□□□□ -1.46
SRP54YPR088C VTC1P40046 129 aaRIP-Chip data5.89□□□□□ -1.47not detected
SRP54YPR088C YDR115WQ04598 105 aa5.89□□□□□ -1.47
SRP54YPR088C PPT2Q12036 173 aa5.89□□□□□ -1.47
SRP54YPR088C DIF1O13577 133 aa5.88□□□□□ -1.47
SRP54YPR088C RPL28P02406 149 aaKnown RBP5.88□□□□□ -1.47
SRP54YPR088C COX14P39103 70 aa5.88□□□□□ -1.47
SRP54YPR088C OXA1P39952 402 aa5.88□□□□□ -1.47
SRP54YPR088C RPC10P40422 70 aa5.88□□□□□ -1.47
SRP54YPR088C ELC1Q03071 99 aa5.88□□□□□ -1.47
SRP54YPR088C YMR175W-AQ3E766 64 aa5.88□□□□□ -1.47
SRP54YPR088C SVP26P38869 228 aa5.88□□□□□ -1.47
SRP54YPR088C YFR057WP43625 151 aa5.88□□□□□ -1.47
SRP54YPR088C ADH1P00330 348 aaKnown RBP5.86□□□□□ -1.47
SRP54YPR088C UGX2P32772 223 aa5.86□□□□□ -1.47
SRP54YPR088C TOA2P32774 122 aa5.86□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 35.8 ms