RNA–Protein interactions for RNA: YPL211W

NIP7, Transcript of Nucleolar protein required for 60S ribosome subunit biogenesis, yeastyeast

Gene NIP7, Length 546 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIP7YPL211W KTI12P34253 313 aaKnown RBP2.33□□□□□ -2.04
NIP7YPL211W PET8P38921 284 aa2.33□□□□□ -2.04
NIP7YPL211W TEM1P38987 245 aa2.33□□□□□ -2.04
NIP7YPL211W SAL1D6W196 494 aa2.32□□□□□ -2.04
NIP7YPL211W UBC5P15732 148 aa2.32□□□□□ -2.04
NIP7YPL211W SEC72P39742 193 aaKnown RBP2.32□□□□□ -2.04
NIP7YPL211W DCV1P43595 202 aa2.32□□□□□ -2.04
NIP7YPL211W YGL118CP53132 145 aa2.32□□□□□ -2.04
NIP7YPL211W ARL3Q02804 198 aa2.32□□□□□ -2.04
NIP7YPL211W MGR2Q02889 113 aa2.32□□□□□ -2.04
NIP7YPL211W PFY1P07274 126 aa2.31□□□□□ -2.04
NIP7YPL211W GSP1P32835 219 aaKnown RBP2.31□□□□□ -2.04
NIP7YPL211W GSP2P32836 220 aaKnown RBP2.31□□□□□ -2.04
NIP7YPL211W YKR070WP36151 352 aaKnown RBP2.31□□□□□ -2.04
NIP7YPL211W YER076CP40049 302 aa2.31□□□□□ -2.04
NIP7YPL211W YNL200CP40165 246 aaKnown RBP2.31□□□□□ -2.04
NIP7YPL211W CDC40P40968 455 aaPredicted RBP2.31□□□□□ -2.04
NIP7YPL211W ERI1P62651 68 aaKnown RBP2.31□□□□□ -2.04
NIP7YPL211W PMP3P87284 55 aa2.31□□□□□ -2.04
NIP7YPL211W YIL014C-AQ02598 104 aa2.31□□□□□ -2.04
NIP7YPL211W ATP16Q12165 160 aa2.31□□□□□ -2.04
NIP7YPL211W YPR014CQ6B0W2 109 aa2.31□□□□□ -2.04
NIP7YPL211W MDN1Q12019 4910 aaKnown RBP2.3□□□□□ -2.04
NIP7YPL211W PRE1P22141 198 aaKnown RBP2.3□□□□□ -2.04
NIP7YPL211W MRP49P32388 137 aa2.3□□□□□ -2.04
NIP7YPL211W ARC15P40518 154 aaRIP-Chip data2.3□□□□□ -2.04not detected
NIP7YPL211W SPC1P46965 94 aa2.3□□□□□ -2.04
NIP7YPL211W TOS6P48560 102 aa2.3□□□□□ -2.04
NIP7YPL211W FCF1Q05498 189 aaPredicted RBP2.3□□□□□ -2.04
NIP7YPL211W DPP1Q05521 289 aa2.3□□□□□ -2.04
NIP7YPL211W YMR122W-AQ3E842 84 aa2.3□□□□□ -2.04
NIP7YPL211W RPL16AP26784 199 aaKnown RBP2.29□□□□□ -2.04
NIP7YPL211W SSS1P35179 80 aa2.29□□□□□ -2.04
NIP7YPL211W YBR209WP38311 105 aa2.29□□□□□ -2.04
NIP7YPL211W YER134CP40081 178 aa2.29□□□□□ -2.04
NIP7YPL211W YIL059CP40520 121 aa2.29□□□□□ -2.04
NIP7YPL211W YJR146WP47174 117 aa2.29□□□□□ -2.04
NIP7YPL211W ERV14P53173 138 aa2.29□□□□□ -2.04
NIP7YPL211W CUE4Q04201 117 aaPredicted RBP2.29□□□□□ -2.04
NIP7YPL211W CMC2Q3E7A4 109 aa2.29□□□□□ -2.04
NIP7YPL211W HTL1Q9URQ5 78 aa2.29□□□□□ -2.04
NIP7YPL211W RPL33AP05744 107 aaKnown RBP2.28□□□□□ -2.04
NIP7YPL211W HMRA2P0CY13 119 aa2.28□□□□□ -2.04
NIP7YPL211W AIM29P36154 155 aa2.28□□□□□ -2.04
NIP7YPL211W RPL33BP41056 107 aaKnown RBP2.28□□□□□ -2.04
NIP7YPL211W YJL028WP47062 111 aa2.28□□□□□ -2.04
NIP7YPL211W OST3P48439 350 aa2.28□□□□□ -2.04
NIP7YPL211W YGL088WP53151 121 aa2.28□□□□□ -2.04
NIP7YPL211W POP3P53833 195 aaPredicted RBP2.28□□□□□ -2.04
NIP7YPL211W YDR042CQ03205 200 aa2.28□□□□□ -2.04
NIP7YPL211W YOR008C-AQ3E7B9 74 aa2.28□□□□□ -2.04
NIP7YPL211W YPR010C-AA5Z2X5 72 aa2.27□□□□□ -2.05
NIP7YPL211W RTC6O14464 93 aa2.27□□□□□ -2.05
NIP7YPL211W RPL27BP0C2H7 136 aaKnown RBP2.27□□□□□ -2.05
NIP7YPL211W MRPL11P36521 249 aaPredicted RBP2.27□□□□□ -2.05
NIP7YPL211W PKR1Q03880 122 aaKnown RBP2.27□□□□□ -2.05
NIP7YPL211W YDR115WQ04598 105 aa2.27□□□□□ -2.05
NIP7YPL211W SEN15Q04675 128 aa2.27□□□□□ -2.05
NIP7YPL211W COA3Q3E7B2 85 aa2.27□□□□□ -2.05
NIP7YPL211W YIL134C-AQ45U18 67 aa2.27□□□□□ -2.05
NIP7YPL211W YLL066W-BQ8TGJ7 56 aa2.27□□□□□ -2.05
NIP7YPL211W TOA2P32774 122 aa2.26□□□□□ -2.05
NIP7YPL211W PAU16P35994 123 aa2.26□□□□□ -2.05
NIP7YPL211W FYV4P38783 130 aaPredicted RBP2.26□□□□□ -2.05
NIP7YPL211W SVP26P38869 228 aa2.26□□□□□ -2.05
NIP7YPL211W YEL008WP40001 126 aa2.26□□□□□ -2.05
NIP7YPL211W ERG28P40030 148 aa2.26□□□□□ -2.05
NIP7YPL211W YER085CP40058 173 aa2.26□□□□□ -2.05
NIP7YPL211W YMR103CQ04436 120 aa2.26□□□□□ -2.05
NIP7YPL211W YMR320WQ04897 101 aa2.26□□□□□ -2.05
NIP7YPL211W CNL1Q06333 122 aa2.26□□□□□ -2.05
NIP7YPL211W COA6Q3E846 104 aa2.26□□□□□ -2.05
NIP7YPL211W RPL31AP0C2H8 113 aaKnown RBP2.25□□□□□ -2.05
NIP7YPL211W APS1P35181 156 aa2.25□□□□□ -2.05
NIP7YPL211W YAR029WP39549 74 aa2.25□□□□□ -2.05
NIP7YPL211W YPR195CQ06594 109 aa2.25□□□□□ -2.05
NIP7YPL211W ENV10Q99382 181 aa2.25□□□□□ -2.05
NIP7YPL211W ATP15P21306 62 aa2.24□□□□□ -2.05
NIP7YPL211W YKL070WP36087 169 aa2.24□□□□□ -2.05
NIP7YPL211W YBR219CP38317 127 aa2.24□□□□□ -2.05
NIP7YPL211W PEX22P39718 180 aa2.24□□□□□ -2.05
NIP7YPL211W YLR050CQ12155 161 aaKnown RBP2.24□□□□□ -2.05
NIP7YPL211W DFM1Q12743 341 aaKnown RBP2.24□□□□□ -2.05
NIP7YPL211W RRT15Q3E811 62 aa2.24□□□□□ -2.05
NIP7YPL211W SEC11P15367 167 aa2.23□□□□□ -2.05
NIP7YPL211W ANB1P19211 157 aa2.23□□□□□ -2.05
NIP7YPL211W SMP1P38128 452 aa2.23□□□□□ -2.05
NIP7YPL211W RPC10P40422 70 aa2.23□□□□□ -2.05
NIP7YPL211W AIM11P87275 137 aa2.23□□□□□ -2.05
NIP7YPL211W YMR295CQ03559 197 aa2.23□□□□□ -2.05
NIP7YPL211W YLR194CQ05777 254 aa2.23□□□□□ -2.05
NIP7YPL211W SCS22Q6Q595 175 aa2.23□□□□□ -2.05
NIP7YPL211W YAR023CD6VPM8 179 aa2.22□□□□□ -2.05
NIP7YPL211W YBL081WP38180 368 aaKnown RBP2.22□□□□□ -2.05
NIP7YPL211W SHU1P38751 150 aa2.22□□□□□ -2.05
NIP7YPL211W YAL064WP39711 94 aa2.22□□□□□ -2.05
NIP7YPL211W YPL261CQ08976 102 aa2.22□□□□□ -2.05
NIP7YPL211W YMR175W-AQ3E766 64 aa2.22□□□□□ -2.05
NIP7YPL211W YAL065CO13511 128 aa2.21□□□□□ -2.06
NIP7YPL211W YDL022C-AP0C5L6 82 aa2.21□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 146.5 ms