RNA–Protein interactions for RNA: YPL084W

BRO1, Transcript of Cytoplasmic class E vacuolar protein sorting (VPS) factor, yeastyeast

Gene BRO1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRO1YPL084W YGL149WP53116 101 aa0.66□□□□□ -2.3
BRO1YPL084W CSN9Q03981 162 aa0.66□□□□□ -2.3
BRO1YPL084W IRA1P18963 3092 aa0.65□□□□□ -2.3
BRO1YPL084W YAL064WP39711 94 aa0.65□□□□□ -2.31
BRO1YPL084W YMR141CP40211 102 aa0.65□□□□□ -2.31
BRO1YPL084W PFY1P07274 126 aa0.65□□□□□ -2.31
BRO1YPL084W ELC1Q03071 99 aa0.65□□□□□ -2.31
BRO1YPL084W YLR296WQ05898 108 aa0.65□□□□□ -2.31
BRO1YPL084W KTI11Q3E840 82 aa0.65□□□□□ -2.31
BRO1YPL084W MRPL11P36521 249 aaPredicted RBP0.64□□□□□ -2.31
BRO1YPL084W TRS20P38334 175 aa0.64□□□□□ -2.31
BRO1YPL084W SDH7Q04401 133 aa0.64□□□□□ -2.31
BRO1YPL084W FIT3Q08907 204 aa0.64□□□□□ -2.31
BRO1YPL084W YNL277W-AQ3E7Z0 62 aa0.64□□□□□ -2.31
BRO1YPL084W RPO41P13433 1351 aaKnown RBP0.64□□□□□ -2.31
BRO1YPL084W RTC6O14464 93 aa0.64□□□□□ -2.31
BRO1YPL084W AIM4P38305 123 aaPredicted RBP0.64□□□□□ -2.31
BRO1YPL084W COA6Q3E846 104 aa0.64□□□□□ -2.31
BRO1YPL084W PAU21P0CE86 164 aa0.63□□□□□ -2.31
BRO1YPL084W PAU22P0CE87 164 aa0.63□□□□□ -2.31
BRO1YPL084W TVP18Q04767 167 aa0.63□□□□□ -2.31
BRO1YPL084W MOT1P32333 1867 aa0.62□□□□□ -2.31
BRO1YPL084W HAP3P13434 144 aa0.62□□□□□ -2.31
BRO1YPL084W HSP10P38910 106 aa0.62□□□□□ -2.31
BRO1YPL084W GIM4P40005 111 aaKnown RBP0.62□□□□□ -2.31
BRO1YPL084W PHS1P40857 217 aa0.62□□□□□ -2.31
BRO1YPL084W MVB12P42939 101 aa0.62□□□□□ -2.31
BRO1YPL084W YGL204CP53089 101 aa0.62□□□□□ -2.31
BRO1YPL084W YDR278CQ05612 105 aa0.62□□□□□ -2.31
BRO1YPL084W GTT2Q12390 233 aa0.62□□□□□ -2.31
BRO1YPL084W HUG1Q6Q5K6 68 aa0.62□□□□□ -2.31
BRO1YPL084W URA2P07259 2214 aaKnown RBP0.62□□□□□ -2.31
BRO1YPL084W AIM18P38884 321 aa0.62□□□□□ -2.31
BRO1YPL084W YSF3P0C074 85 aaPredicted RBP0.61□□□□□ -2.31
BRO1YPL084W SUA7P29055 345 aaPredicted RBP0.61□□□□□ -2.31
BRO1YPL084W YBR013CP38215 129 aa0.61□□□□□ -2.31
BRO1YPL084W RPS20P38701 121 aaKnown RBP0.61□□□□□ -2.31
BRO1YPL084W YGR017WP53210 297 aa0.61□□□□□ -2.31
BRO1YPL084W MIC27P50945 234 aa0.61□□□□□ -2.31
BRO1YPL084W YLR361C-AQ3E795 98 aa0.61□□□□□ -2.31
BRO1YPL084W PRS3P38689 320 aaKnown RBP0.6□□□□□ -2.31
BRO1YPL084W TOM1Q03280 3268 aa0.6□□□□□ -2.31
BRO1YPL084W MEC1P38111 2368 aa0.6□□□□□ -2.31
BRO1YPL084W GSP1P32835 219 aaKnown RBP0.6□□□□□ -2.31
BRO1YPL084W YGR042WP53227 271 aa0.6□□□□□ -2.31
BRO1YPL084W HYM1P32464 399 aa0.59□□□□□ -2.31
BRO1YPL084W SFT1P43682 97 aa0.59□□□□□ -2.31
BRO1YPL084W YLR307C-AQ3E825 87 aa0.59□□□□□ -2.31
BRO1YPL084W MPC1P53157 130 aaKnown RBP0.59□□□□□ -2.32
BRO1YPL084W TIM8P57744 87 aa0.59□□□□□ -2.32
BRO1YPL084W LDB18Q07887 179 aa0.59□□□□□ -2.32
BRO1YPL084W ATP14Q12349 124 aa0.59□□□□□ -2.32
BRO1YPL084W Q0144Q9ZZW2 109 aa0.59□□□□□ -2.32
BRO1YPL084W YOR034C-AQ3E735 80 aa0.58□□□□□ -2.32
BRO1YPL084W GAT4P40569 121 aa0.58□□□□□ -2.32
BRO1YPL084W POL2P21951 2222 aaKnown RBP0.57□□□□□ -2.32
BRO1YPL084W RPL36BO14455 100 aaKnown RBP0.57□□□□□ -2.32
BRO1YPL084W RPL36AP05745 100 aaPredicted RBP0.57□□□□□ -2.32
BRO1YPL084W CNL1Q06333 122 aa0.57□□□□□ -2.32
BRO1YPL084W MYO1P08964 1928 aa0.57□□□□□ -2.32
BRO1YPL084W YLR157W-EP0CF00 54 aa0.56□□□□□ -2.32
BRO1YPL084W YMR321CQ04898 105 aa0.56□□□□□ -2.32
BRO1YPL084W SPC2Q04969 178 aa0.56□□□□□ -2.32
BRO1YPL084W FCF2Q12035 217 aaPredicted RBP0.56□□□□□ -2.32
BRO1YPL084W STT4P37297 1900 aa0.56□□□□□ -2.32
BRO1YPL084W SRX1P36077 127 aa0.56□□□□□ -2.32
BRO1YPL084W YIL163CP40448 117 aa0.56□□□□□ -2.32
BRO1YPL084W ERV14P53173 138 aa0.56□□□□□ -2.32
BRO1YPL084W YLR194CQ05777 254 aa0.56□□□□□ -2.32
BRO1YPL084W MED11Q99278 115 aa0.56□□□□□ -2.32
BRO1YPL084W YJL197C-AP0C5P0 93 aa0.55□□□□□ -2.32
BRO1YPL084W RPS29AP41057 56 aaKnown RBP0.55□□□□□ -2.32
BRO1YPL084W MRPL31P14063 131 aaPredicted RBP0.55□□□□□ -2.32
BRO1YPL084W SEC59P20048 519 aa0.55□□□□□ -2.32
BRO1YPL084W ACP1P32463 125 aa0.55□□□□□ -2.32
BRO1YPL084W DYN2Q02647 92 aa0.54□□□□□ -2.32
BRO1YPL084W YKL044WP36092 106 aa0.54□□□□□ -2.32
BRO1YPL084W POP7P38291 140 aa0.54□□□□□ -2.32
BRO1YPL084W YOR376W-AQ3E805 51 aa0.53□□□□□ -2.32
BRO1YPL084W EMP24P32803 203 aaKnown RBP0.53□□□□□ -2.33
BRO1YPL084W NKP2Q06162 153 aa0.53□□□□□ -2.33
BRO1YPL084W HPA2Q06592 156 aa0.53□□□□□ -2.33
BRO1YPL084W SAE3P89114 91 aa0.52□□□□□ -2.33
BRO1YPL084W RAD50P12753 1312 aa0.52□□□□□ -2.33
BRO1YPL084W GPI19Q04082 140 aa0.5□□□□□ -2.33
BRO1YPL084W CCW14O13547 238 aa0.5□□□□□ -2.33
BRO1YPL084W POR2P40478 281 aa0.5□□□□□ -2.33
BRO1YPL084W ICS3P47034 131 aa0.5□□□□□ -2.33
BRO1YPL084W YIL014C-AQ02598 104 aa0.5□□□□□ -2.33
BRO1YPL084W RPL22AP05749 121 aaKnown RBP0.49□□□□□ -2.33
BRO1YPL084W MRP49P32388 137 aa0.49□□□□□ -2.33
BRO1YPL084W YJR128WP47162 119 aa0.49□□□□□ -2.33
BRO1YPL084W ENV10Q99382 181 aa0.49□□□□□ -2.33
BRO1YPL084W SNF11P38956 169 aa0.49□□□□□ -2.33
BRO1YPL084W OCA6Q12454 224 aa0.49□□□□□ -2.33
BRO1YPL084W SLO1Q3E784 85 aa0.49□□□□□ -2.33
BRO1YPL084W YGR240C-AQ3E786 66 aa0.48□□□□□ -2.33
BRO1YPL084W LCL1Q02786 101 aa0.47□□□□□ -2.33
BRO1YPL084W IRA2P19158 3079 aa0.47□□□□□ -2.33
BRO1YPL084W PAU12P53343 120 aa0.47□□□□□ -2.33
Retrieved 100 of 5,963 RNA–protein pairs in 47.7 ms