RNA–Protein interactions for RNA: YGL228W

SHE10, Transcript of Protein involved in outer spore wall assembly, yeastyeast

Gene SHE10, Length 1,734 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE10YGL228W YGL088WP53151 121 aa3.98□□□□□ -1.77
SHE10YGL228W SGF11Q03067 99 aa3.98□□□□□ -1.77
SHE10YGL228W CNL1Q06333 122 aa3.98□□□□□ -1.77
SHE10YGL228W COA3Q3E7B2 85 aa3.98□□□□□ -1.77
SHE10YGL228W HTL1Q9URQ5 78 aa3.98□□□□□ -1.77
SHE10YGL228W RPL27BP0C2H7 136 aaKnown RBP3.97□□□□□ -1.77
SHE10YGL228W SEC11P15367 167 aa3.97□□□□□ -1.77
SHE10YGL228W UBC5P15732 148 aa3.97□□□□□ -1.77
SHE10YGL228W SCM4P32564 187 aa3.97□□□□□ -1.77
SHE10YGL228W YBR209WP38311 105 aa3.97□□□□□ -1.77
SHE10YGL228W YMR103CQ04436 120 aa3.97□□□□□ -1.77
SHE10YGL228W YGR240C-AQ3E786 66 aa3.97□□□□□ -1.77
SHE10YGL228W HAC1P41546 238 aa3.96□□□□□ -1.78
SHE10YGL228W PMP3P87284 55 aa3.96□□□□□ -1.78
SHE10YGL228W HAL1Q01766 294 aa3.96□□□□□ -1.78
SHE10YGL228W YOR008C-AQ3E7B9 74 aa3.96□□□□□ -1.78
SHE10YGL228W YGL230CP53074 147 aa3.95□□□□□ -1.78
SHE10YGL228W NAT5Q08689 176 aa3.95□□□□□ -1.78
SHE10YGL228W YDL157CQ12082 118 aa3.95□□□□□ -1.78
SHE10YGL228W APS1P35181 156 aa3.95□□□□□ -1.78
SHE10YGL228W AIM29P36154 155 aa3.95□□□□□ -1.78
SHE10YGL228W YIL059CP40520 121 aa3.95□□□□□ -1.78
SHE10YGL228W URM1P40554 99 aaPredicted RBP3.95□□□□□ -1.78
SHE10YGL228W CRC1Q12289 327 aa3.95□□□□□ -1.78
SHE10YGL228W ADH2P00331 348 aaKnown RBP3.94□□□□□ -1.78
SHE10YGL228W ARC15P40518 154 aaRIP-Chip data3.94□□□□□ -1.78not detected
SHE10YGL228W YLR050CQ12155 161 aaKnown RBP3.94□□□□□ -1.78
SHE10YGL228W YDL022C-AP0C5L6 82 aa3.93□□□□□ -1.78
SHE10YGL228W MRPL44P19956 98 aa3.93□□□□□ -1.78
SHE10YGL228W YKL070WP36087 169 aa3.93□□□□□ -1.78
SHE10YGL228W MSL1P40567 111 aaPredicted RBP3.93□□□□□ -1.78
SHE10YGL228W DFM1Q12743 341 aaKnown RBP3.93□□□□□ -1.78
SHE10YGL228W TRP1P00912 224 aa3.92□□□□□ -1.78
SHE10YGL228W ATP15P21306 62 aa3.92□□□□□ -1.78
SHE10YGL228W MRP49P32388 137 aa3.92□□□□□ -1.78
SHE10YGL228W YEL008WP40001 126 aa3.92□□□□□ -1.78
SHE10YGL228W BET5Q03630 159 aa3.92□□□□□ -1.78
SHE10YGL228W FYV7Q12247 151 aa3.92□□□□□ -1.78
SHE10YGL228W YER085CP40058 173 aa3.92□□□□□ -1.78
SHE10YGL228W YMR122W-AQ3E842 84 aa3.92□□□□□ -1.78
SHE10YGL228W RPL31AP0C2H8 113 aaKnown RBP3.91□□□□□ -1.78
SHE10YGL228W ATP5P09457 212 aa3.9□□□□□ -1.78
SHE10YGL228W YEL067CP39978 195 aa3.9□□□□□ -1.78
SHE10YGL228W AIM11P87275 137 aa3.9□□□□□ -1.78
SHE10YGL228W YPL261CQ08976 102 aa3.9□□□□□ -1.78
SHE10YGL228W YCL021W-AQ96VH3 125 aa3.9□□□□□ -1.78
SHE10YGL228W YBR219CP38317 127 aa3.9□□□□□ -1.79
SHE10YGL228W ERI1P62651 68 aaKnown RBP3.9□□□□□ -1.79
SHE10YGL228W YKL044WP36092 106 aa3.89□□□□□ -1.79
SHE10YGL228W POP7P38291 140 aa3.89□□□□□ -1.79
SHE10YGL228W RPR2P40571 144 aa3.89□□□□□ -1.79
SHE10YGL228W YDL085C-AQ3E7B7 68 aaKnown RBP3.89□□□□□ -1.79
SHE10YGL228W RPS8AP0CX39 200 aaKnown RBP3.88□□□□□ -1.79
SHE10YGL228W RPS8BP0CX40 200 aaKnown RBP3.88□□□□□ -1.79
SHE10YGL228W YCR007CP25354 239 aa3.88□□□□□ -1.79
SHE10YGL228W YKR041WP36134 250 aa3.88□□□□□ -1.79
SHE10YGL228W RPL32P38061 130 aaKnown RBP3.88□□□□□ -1.79
SHE10YGL228W YPL073CP40323 161 aa3.88□□□□□ -1.79
SHE10YGL228W SAE3P89114 91 aa3.88□□□□□ -1.79
SHE10YGL228W YLR194CQ05777 254 aa3.88□□□□□ -1.79
SHE10YGL228W YLL066W-BQ8TGJ7 56 aa3.88□□□□□ -1.79
SHE10YGL228W RPL33AP05744 107 aaKnown RBP3.87□□□□□ -1.79
SHE10YGL228W VTC1P40046 129 aaRIP-Chip data3.87□□□□□ -1.79not detected
SHE10YGL228W RPL33BP41056 107 aaKnown RBP3.87□□□□□ -1.79
SHE10YGL228W YNR077CP53758 84 aa3.87□□□□□ -1.79
SHE10YGL228W YMR295CQ03559 197 aa3.87□□□□□ -1.79
SHE10YGL228W YMR320WQ04897 101 aa3.87□□□□□ -1.79
SHE10YGL228W DIF1O13577 133 aa3.87□□□□□ -1.79
SHE10YGL228W CIN5P40917 295 aa3.87□□□□□ -1.79
SHE10YGL228W SPC1P46965 94 aa3.87□□□□□ -1.79
SHE10YGL228W PBA1Q05778 276 aa3.87□□□□□ -1.79
SHE10YGL228W SHU1P38751 150 aa3.86□□□□□ -1.79
SHE10YGL228W YDR115WQ04598 105 aa3.86□□□□□ -1.79
SHE10YGL228W PAU23Q07987 124 aa3.86□□□□□ -1.79
SHE10YGL228W PAU17Q12370 124 aa3.86□□□□□ -1.79
SHE10YGL228W RRT15Q3E811 62 aa3.86□□□□□ -1.79
SHE10YGL228W RPL28P02406 149 aaKnown RBP3.85□□□□□ -1.79
SHE10YGL228W RPL18AP0CX49 186 aaKnown RBP3.85□□□□□ -1.79
SHE10YGL228W RPL18BP0CX50 186 aaKnown RBP3.85□□□□□ -1.79
SHE10YGL228W RPF1P38805 295 aaKnown RBP3.85□□□□□ -1.79
SHE10YGL228W MRPS12P53732 153 aa3.85□□□□□ -1.79
SHE10YGL228W SVP26P38869 228 aa3.84□□□□□ -1.79
SHE10YGL228W ERG28P40030 148 aa3.84□□□□□ -1.79
SHE10YGL228W YFR057WP43625 151 aa3.84□□□□□ -1.79
SHE10YGL228W LSO2Q3E772 92 aaKnown RBP3.84□□□□□ -1.79
SHE10YGL228W YBL081WP38180 368 aaKnown RBP3.84□□□□□ -1.8
SHE10YGL228W PEX17P40155 199 aa3.84□□□□□ -1.8
SHE10YGL228W YNL190WP53872 204 aa3.84□□□□□ -1.8
SHE10YGL228W ENV10Q99382 181 aa3.84□□□□□ -1.8
SHE10YGL228W YAR029WP39549 74 aa3.83□□□□□ -1.8
SHE10YGL228W YAL064WP39711 94 aa3.83□□□□□ -1.8
SHE10YGL228W OXA1P39952 402 aa3.83□□□□□ -1.8
SHE10YGL228W IGO2Q9P305 131 aa3.83□□□□□ -1.8
SHE10YGL228W YPR010C-AA5Z2X5 72 aa3.82□□□□□ -1.8
SHE10YGL228W RTC6O14464 93 aa3.82□□□□□ -1.8
SHE10YGL228W GLC8P41818 229 aa3.82□□□□□ -1.8
SHE10YGL228W COX14P39103 70 aa3.81□□□□□ -1.8
SHE10YGL228W RPC10P40422 70 aa3.81□□□□□ -1.8
SHE10YGL228W YAL065CO13511 128 aa3.81□□□□□ -1.8
SHE10YGL228W UGX2P32772 223 aa3.81□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 39 ms