RNA–Protein interactions for RNA: YDR328C

SKP1, Transcript of Evolutionarily conserved kinetochore protein, yeast

Gene SKP1, Length 585 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKP1	YDR328C	PMP3	P87284	55 aa		5.27	□□□□□ -1.57
SKP1	YDR328C	HAL1	Q01766	294 aa		5.27	□□□□□ -1.57
SKP1	YDR328C	TPT1	Q12272	230 aa	Known RBP	5.27	□□□□□ -1.57
SKP1	YDR328C	YOR008C-A	Q3E7B9	74 aa		5.27	□□□□□ -1.57
SKP1	YDR328C	RPL16A	P26784	199 aa	Known RBP	5.26	□□□□□ -1.57
SKP1	YDR328C	MRP49	P32388	137 aa		5.26	□□□□□ -1.57
SKP1	YDR328C	YJR146W	P47174	117 aa		5.26	□□□□□ -1.57
SKP1	YDR328C	CRC1	Q12289	327 aa		5.26	□□□□□ -1.57
SKP1	YDR328C	COA3	Q3E7B2	85 aa		5.26	□□□□□ -1.57
SKP1	YDR328C	HMRA2	P0CY13	119 aa		5.25	□□□□□ -1.57
SKP1	YDR328C	YPT53	P36019	220 aa		5.25	□□□□□ -1.57
SKP1	YDR328C	YLR050C	Q12155	161 aa	Known RBP	5.25	□□□□□ -1.57
SKP1	YDR328C	TRP1	P00912	224 aa		5.24	□□□□□ -1.57
SKP1	YDR328C	RPP2A	P05319	106 aa	Known RBP	5.24	□□□□□ -1.57
SKP1	YDR328C	RPL31A	P0C2H8	113 aa	Known RBP	5.24	□□□□□ -1.57
SKP1	YDR328C	SEC11	P15367	167 aa		5.24	□□□□□ -1.57
SKP1	YDR328C	FUN14	P18411	198 aa		5.24	□□□□□ -1.57
SKP1	YDR328C	YKL069W	P36088	180 aa		5.24	□□□□□ -1.57
SKP1	YDR328C	FYV4	P38783	130 aa	Predicted RBP	5.24	□□□□□ -1.57
SKP1	YDR328C	URM1	P40554	99 aa	Predicted RBP	5.24	□□□□□ -1.57
SKP1	YDR328C	HAC1	P41546	238 aa		5.24	□□□□□ -1.57
SKP1	YDR328C	PKR1	Q03880	122 aa	Known RBP	5.24	□□□□□ -1.57
SKP1	YDR328C	YMR103C	Q04436	120 aa		5.24	□□□□□ -1.57
SKP1	YDR328C	YMR122W-A	Q3E842	84 aa		5.24	□□□□□ -1.57
SKP1	YDR328C	RPS8A	P0CX39	200 aa	Known RBP	5.23	□□□□□ -1.57
SKP1	YDR328C	RPS8B	P0CX40	200 aa	Known RBP	5.23	□□□□□ -1.57
SKP1	YDR328C	APS1	P35181	156 aa		5.23	□□□□□ -1.57
SKP1	YDR328C	ADH2	P00331	348 aa	Known RBP	5.22	□□□□□ -1.57
SKP1	YDR328C	STF1	P01098	86 aa		5.22	□□□□□ -1.57
SKP1	YDR328C	ARC15	P40518	154 aa	RIP-Chip data	5.22	□□□□□ -1.57	not detected
SKP1	YDR328C	ERI1	P62651	68 aa	Known RBP	5.22	□□□□□ -1.57
SKP1	YDR328C	YKL070W	P36087	169 aa		5.21	□□□□□ -1.58
SKP1	YDR328C	YBR209W	P38311	105 aa		5.21	□□□□□ -1.58
SKP1	YDR328C	YGL230C	P53074	147 aa		5.21	□□□□□ -1.58
SKP1	YDR328C	YGL088W	P53151	121 aa		5.21	□□□□□ -1.58
SKP1	YDR328C	YDL157C	Q12082	118 aa		5.21	□□□□□ -1.58
SKP1	YDR328C	TMA7	Q3E764	64 aa	Known RBP	5.21	□□□□□ -1.58
SKP1	YDR328C	SCS22	Q6Q595	175 aa		5.21	□□□□□ -1.58
SKP1	YDR328C	ATP5	P09457	212 aa		5.2	□□□□□ -1.58
SKP1	YDR328C	YEL008W	P40001	126 aa		5.2	□□□□□ -1.58
SKP1	YDR328C	YIL059C	P40520	121 aa		5.2	□□□□□ -1.58
SKP1	YDR328C	BET5	Q03630	159 aa		5.2	□□□□□ -1.58
SKP1	YDR328C	SPC1	P46965	94 aa		5.19	□□□□□ -1.58
SKP1	YDR328C	NAT5	Q08689	176 aa		5.19	□□□□□ -1.58
SKP1	YDR328C	YDL085C-A	Q3E7B7	68 aa	Known RBP	5.19	□□□□□ -1.58
SKP1	YDR328C	RPL33A	P05744	107 aa	Known RBP	5.18	□□□□□ -1.58
SKP1	YDR328C	YCR007C	P25354	239 aa		5.18	□□□□□ -1.58
SKP1	YDR328C	MSL1	P40567	111 aa	Predicted RBP	5.18	□□□□□ -1.58
SKP1	YDR328C	RPR2	P40571	144 aa		5.18	□□□□□ -1.58
SKP1	YDR328C	RPL33B	P41056	107 aa	Known RBP	5.18	□□□□□ -1.58
SKP1	YDR328C	SAE3	P89114	91 aa		5.18	□□□□□ -1.58
SKP1	YDR328C	YLL066W-B	Q8TGJ7	56 aa		5.18	□□□□□ -1.58
SKP1	YDR328C	YDL022C-A	P0C5L6	82 aa		5.17	□□□□□ -1.58
SKP1	YDR328C	YKL044W	P36092	106 aa		5.17	□□□□□ -1.58
SKP1	YDR328C	GLC8	P41818	229 aa		5.17	□□□□□ -1.58
SKP1	YDR328C	YLR194C	Q05777	254 aa		5.17	□□□□□ -1.58
SKP1	YDR328C	YCL021W-A	Q96VH3	125 aa		5.17	□□□□□ -1.58
SKP1	YDR328C	ATP15	P21306	62 aa		5.16	□□□□□ -1.58
SKP1	YDR328C	DFM1	Q12743	341 aa	Known RBP	5.16	□□□□□ -1.58
SKP1	YDR328C	ERG28	P40030	148 aa		5.15	□□□□□ -1.59
SKP1	YDR328C	AIM11	P87275	137 aa		5.15	□□□□□ -1.59
SKP1	YDR328C	YPL261C	Q08976	102 aa		5.15	□□□□□ -1.59
SKP1	YDR328C	CPR1	P14832	162 aa	Known RBP	5.14	□□□□□ -1.59
SKP1	YDR328C	YBR219C	P38317	127 aa		5.14	□□□□□ -1.59
SKP1	YDR328C	YAR029W	P39549	74 aa		5.14	□□□□□ -1.59
SKP1	YDR328C	YER085C	P40058	173 aa		5.14	□□□□□ -1.59
SKP1	YDR328C	YMR320W	Q04897	101 aa		5.14	□□□□□ -1.59
SKP1	YDR328C	YPR010C-A	A5Z2X5	72 aa		5.13	□□□□□ -1.59
SKP1	YDR328C	YKR041W	P36134	250 aa		5.13	□□□□□ -1.59
SKP1	YDR328C	YDR115W	Q04598	105 aa		5.13	□□□□□ -1.59
SKP1	YDR328C	PBA1	Q05778	276 aa		5.13	□□□□□ -1.59
SKP1	YDR328C	YPL257W	Q08974	193 aa		5.13	□□□□□ -1.59
SKP1	YDR328C	RPL32	P38061	130 aa	Known RBP	5.12	□□□□□ -1.59
SKP1	YDR328C	YEL067C	P39978	195 aa		5.12	□□□□□ -1.59
SKP1	YDR328C	YPL073C	P40323	161 aa		5.12	□□□□□ -1.59
SKP1	YDR328C	YMR295C	Q03559	197 aa		5.12	□□□□□ -1.59
SKP1	YDR328C	PAU23	Q07987	124 aa		5.12	□□□□□ -1.59
SKP1	YDR328C	PAU17	Q12370	124 aa		5.12	□□□□□ -1.59
SKP1	YDR328C	RTC6	O14464	93 aa		5.11	□□□□□ -1.59
SKP1	YDR328C	HAP3	P13434	144 aa		5.11	□□□□□ -1.59
SKP1	YDR328C	SHU1	P38751	150 aa		5.11	□□□□□ -1.59
SKP1	YDR328C	ENV10	Q99382	181 aa		5.11	□□□□□ -1.59
SKP1	YDR328C	DIF1	O13577	133 aa		5.1	□□□□□ -1.59
SKP1	YDR328C	PEX17	P40155	199 aa		5.1	□□□□□ -1.59
SKP1	YDR328C	RPC10	P40422	70 aa		5.1	□□□□□ -1.59
SKP1	YDR328C	YNR077C	P53758	84 aa		5.1	□□□□□ -1.59
SKP1	YDR328C	YPL080C	Q02826	108 aa		5.1	□□□□□ -1.59
SKP1	YDR328C	MRPS12	P53732	153 aa		5.09	□□□□□ -1.59
SKP1	YDR328C	YMR175W-A	Q3E766	64 aa		5.08	□□□□□ -1.6
SKP1	YDR328C	IGO2	Q9P305	131 aa		5.08	□□□□□ -1.6
SKP1	YDR328C	YAL065C	O13511	128 aa		5.07	□□□□□ -1.6
SKP1	YDR328C	RPL18A	P0CX49	186 aa	Known RBP	5.07	□□□□□ -1.6
SKP1	YDR328C	RPL18B	P0CX50	186 aa	Known RBP	5.07	□□□□□ -1.6
SKP1	YDR328C	ARO2	P28777	376 aa	Known RBP	5.07	□□□□□ -1.6
SKP1	YDR328C	SVP26	P38869	228 aa		5.07	□□□□□ -1.6
SKP1	YDR328C	COX14	P39103	70 aa		5.07	□□□□□ -1.6
SKP1	YDR328C	VTC1	P40046	129 aa	RIP-Chip data	5.07	□□□□□ -1.6	not detected
SKP1	YDR328C	YAR1	P46683	200 aa		5.07	□□□□□ -1.6
SKP1	YDR328C	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	5.07	□□□□□ -1.6	not detected
SKP1	YDR328C	RRT15	Q3E811	62 aa		5.07	□□□□□ -1.6

Retrieved 100 of 5,963 RNA–protein pairs in 27.7 ms