RNA–Protein interactions for RNA: YDR254W

CHL4, Transcript of Outer kinetochore protein required for chromosome stability, yeast

Gene CHL4, Length 1,377 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CHL4	YDR254W	YGR269W	P40326	108 aa		4.27	□□□□□ -1.73
CHL4	YDR254W	PAU12	P53343	120 aa		4.27	□□□□□ -1.73
CHL4	YDR254W	YNR077C	P53758	84 aa		4.27	□□□□□ -1.73
CHL4	YDR254W	RPL22B	P56628	122 aa	Known RBP	4.27	□□□□□ -1.73
CHL4	YDR254W	OST5	Q92316	86 aa		4.27	□□□□□ -1.73
CHL4	YDR254W	PAU2	P32612	120 aa		4.26	□□□□□ -1.73
CHL4	YDR254W	MRPL27	P36526	146 aa	Predicted RBP	4.26	□□□□□ -1.73
CHL4	YDR254W	POP3	P53833	195 aa	Predicted RBP	4.26	□□□□□ -1.73
CHL4	YDR254W	CUE4	Q04201	117 aa	Predicted RBP	4.26	□□□□□ -1.73
CHL4	YDR254W	YPR013C	Q12145	317 aa		4.26	□□□□□ -1.73
CHL4	YDR254W	YDR119W-A	Q2V2P9	66 aa		4.26	□□□□□ -1.73
CHL4	YDR254W	YHL005C	P38752	130 aa		4.25	□□□□□ -1.73
CHL4	YDR254W	RSM18	P40033	138 aa		4.25	□□□□□ -1.73
CHL4	YDR254W	DCV1	P43595	202 aa		4.25	□□□□□ -1.73
CHL4	YDR254W	BRP1	P53194	125 aa		4.25	□□□□□ -1.73
CHL4	YDR254W	YPR153W	Q06537	140 aa		4.25	□□□□□ -1.73
CHL4	YDR254W	YOR268C	Q08734	132 aa		4.25	□□□□□ -1.73
CHL4	YDR254W	TOR1	P35169	2470 aa		4.25	□□□□□ -1.73
CHL4	YDR254W	ATX1	P38636	73 aa		4.24	□□□□□ -1.73
CHL4	YDR254W	YGL149W	P53116	101 aa		4.24	□□□□□ -1.73
CHL4	YDR254W	UTP10	P42945	1769 aa	Known RBP	4.23	□□□□□ -1.73
CHL4	YDR254W	PAU19	P0CE85	124 aa		4.23	□□□□□ -1.73
CHL4	YDR254W	PAU3	P25610	124 aa		4.23	□□□□□ -1.73
CHL4	YDR254W	RPL33B	P41056	107 aa	Known RBP	4.23	□□□□□ -1.73
CHL4	YDR254W	ICY1	Q04329	127 aa		4.23	□□□□□ -1.73
CHL4	YDR254W	PPT2	Q12036	173 aa		4.23	□□□□□ -1.73
CHL4	YDR254W	SOD1	P00445	154 aa	Known RBP	4.22	□□□□□ -1.73
CHL4	YDR254W	RPS23A	P0CX29	145 aa	Known RBP	4.22	□□□□□ -1.73
CHL4	YDR254W	RPS23B	P0CX30	145 aa		4.22	□□□□□ -1.73
CHL4	YDR254W	GCV3	P39726	170 aa	Predicted RBP	4.22	□□□□□ -1.73
CHL4	YDR254W	PAU23	Q07987	124 aa		4.22	□□□□□ -1.73
CHL4	YDR254W	PAU17	Q12370	124 aa		4.22	□□□□□ -1.73
CHL4	YDR254W	YLR236C	A0A023PZG4	107 aa		4.21	□□□□□ -1.74
CHL4	YDR254W	UTR5	P32630	166 aa		4.21	□□□□□ -1.74
CHL4	YDR254W	MET31	Q03081	177 aa		4.21	□□□□□ -1.74
CHL4	YDR254W	RIF1	P29539	1916 aa		4.21	□□□□□ -1.74
CHL4	YDR254W	PAU24	P38155	120 aa		4.2	□□□□□ -1.74
CHL4	YDR254W	ATG8	P38182	117 aa	RIP-Chip data	4.2	□□□□□ -1.74	not detected
CHL4	YDR254W	BOL2	P53082	120 aa		4.2	□□□□□ -1.74
CHL4	YDR254W	RGM1	Q00453	211 aa		4.2	□□□□□ -1.74
CHL4	YDR254W	AVO2	Q04749	426 aa		4.2	□□□□□ -1.74
CHL4	YDR254W	YDL157C	Q12082	118 aa		4.2	□□□□□ -1.74
CHL4	YDR254W	PDR5	P33302	1511 aa	Known RBP	4.19	□□□□□ -1.74
CHL4	YDR254W	YJL197C-A	P0C5P0	93 aa		4.19	□□□□□ -1.74
CHL4	YDR254W	PAU16	P35994	123 aa		4.19	□□□□□ -1.74
CHL4	YDR254W	PAU15	P40585	124 aa		4.19	□□□□□ -1.74
CHL4	YDR254W	YFL051C	P43552	160 aa		4.19	□□□□□ -1.74
CHL4	YDR254W	PCC1	Q3E833	88 aa		4.19	□□□□□ -1.74
CHL4	YDR254W	YIL134C-A	Q45U18	67 aa		4.19	□□□□□ -1.74
CHL4	YDR254W	FKS3	Q04952	1785 aa		4.18	□□□□□ -1.74
CHL4	YDR254W	RTC6	O14464	93 aa		4.18	□□□□□ -1.74
CHL4	YDR254W	RPL22A	P05749	121 aa	Known RBP	4.18	□□□□□ -1.74
CHL4	YDR254W	YIR020C	P40575	100 aa		4.18	□□□□□ -1.74
CHL4	YDR254W	YPI1	P43587	155 aa		4.18	□□□□□ -1.74
CHL4	YDR254W	ICS3	P47034	131 aa		4.18	□□□□□ -1.74
CHL4	YDR254W	MRPS16	Q02608	121 aa		4.18	□□□□□ -1.74
CHL4	YDR254W	YPR195C	Q06594	109 aa		4.18	□□□□□ -1.74
CHL4	YDR254W	YLR419W	Q06698	1435 aa	Known RBP	4.18	□□□□□ -1.74
CHL4	YDR254W	UTH1	P36135	365 aa		4.17	□□□□□ -1.74
CHL4	YDR254W	MRPS9	P38120	278 aa		4.17	□□□□□ -1.74
CHL4	YDR254W	CIS3	P47001	227 aa		4.17	□□□□□ -1.74
CHL4	YDR254W	YJL027C	P47063	138 aa	Predicted RBP	4.17	□□□□□ -1.74
CHL4	YDR254W	RPB7	P34087	171 aa		4.16	□□□□□ -1.74
CHL4	YDR254W	YBR292C	P38357	123 aa		4.16	□□□□□ -1.74
CHL4	YDR254W	IMP2	P46972	177 aa		4.16	□□□□□ -1.74
CHL4	YDR254W	MIC27	P50945	234 aa		4.16	□□□□□ -1.74
CHL4	YDR254W	YIL014C-A	Q02598	104 aa		4.16	□□□□□ -1.74
CHL4	YDR254W	YBR209W	P38311	105 aa		4.15	□□□□□ -1.74
CHL4	YDR254W	YFL012W	P43580	148 aa		4.15	□□□□□ -1.74
CHL4	YDR254W	YDR381C-A	Q3E6R5	114 aa		4.15	□□□□□ -1.74
CHL4	YDR254W	YNR034W-A	Q3E841	98 aa		4.15	□□□□□ -1.74
CHL4	YDR254W	RPL36B	O14455	100 aa	Known RBP	4.14	□□□□□ -1.75
CHL4	YDR254W	RPL36A	P05745	100 aa	Predicted RBP	4.14	□□□□□ -1.75
CHL4	YDR254W	RPS19A	P07280	144 aa	Known RBP	4.14	□□□□□ -1.75
CHL4	YDR254W	RPS19B	P07281	144 aa	Predicted RBP	4.14	□□□□□ -1.75
CHL4	YDR254W	SRX1	P36077	127 aa		4.14	□□□□□ -1.75
CHL4	YDR254W	YNL198C	P40166	100 aa		4.14	□□□□□ -1.75
CHL4	YDR254W	YOL118C	Q08259	102 aa		4.14	□□□□□ -1.75
CHL4	YDR254W	FAS1	P07149	2051 aa	Known RBP	4.14	□□□□□ -1.75
CHL4	YDR254W	YLR194C	Q05777	254 aa		4.14	□□□□□ -1.75
CHL4	YDR254W	VMA9	Q3E7B6	73 aa		4.14	□□□□□ -1.75
CHL4	YDR254W	MHF2	Q3E829	80 aa		4.14	□□□□□ -1.75
CHL4	YDR254W	TY4B-H	P0C2J7	1802 aa		4.13	□□□□□ -1.75
CHL4	YDR254W	COX8	P04039	78 aa		4.13	□□□□□ -1.75
CHL4	YDR254W	PAU5	P43575	122 aa		4.13	□□□□□ -1.75
CHL4	YDR254W	DAD4	P69851	72 aa		4.13	□□□□□ -1.75
CHL4	YDR254W	CYT2	Q00873	224 aa		4.13	□□□□□ -1.75
CHL4	YDR254W	YFL041W-A	Q3E817	63 aa		4.13	□□□□□ -1.75
CHL4	YDR254W	RPL26A	P05743	127 aa	Known RBP	4.12	□□□□□ -1.75
CHL4	YDR254W	SEC11	P15367	167 aa		4.12	□□□□□ -1.75
CHL4	YDR254W	COX23	P38824	151 aa		4.12	□□□□□ -1.75
CHL4	YDR254W	YMR030W-A	Q3E760	96 aa		4.12	□□□□□ -1.75
CHL4	YDR254W	UBR2	Q07963	1872 aa		4.11	□□□□□ -1.75
CHL4	YDR254W	ROX3	P25046	220 aa		4.11	□□□□□ -1.75
CHL4	YDR254W	YEL014C	P39999	101 aa		4.11	□□□□□ -1.75
CHL4	YDR254W	YPR145C-A	Q2V2P0	78 aa		4.11	□□□□□ -1.75
CHL4	YDR254W	CMC4	Q3E7A9	73 aa		4.11	□□□□□ -1.75
CHL4	YDR254W	YPL038W-A	Q3E7B4	63 aa		4.11	□□□□□ -1.75
CHL4	YDR254W	QCR8	P08525	94 aa		4.1	□□□□□ -1.75
CHL4	YDR254W	HPA2	Q06592	156 aa		4.1	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 45.8 ms