RNA–Protein interactions for RNA: ENST00000626109.1

LINC00538-201, long intergenic non-protein coding RNA 538, humanhuman

BASIC

Gene LINC00538, Length 1,906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00538-201ENST00000626109 RNF149Q8NC42 400 aa12.23□□□□□ -0.45
LINC00538-201ENST00000626109 RIN3Q8TB24 985 aa12.23□□□□□ -0.45
LINC00538-201ENST00000626109 DEPTORQ8TB45 409 aa12.23□□□□□ -0.45
LINC00538-201ENST00000626109 AENQ8WTP8 325 aaKnown RBP12.23□□□□□ -0.45
LINC00538-201ENST00000626109 BSNDQ8WZ55 320 aa12.23□□□□□ -0.45
LINC00538-201ENST00000626109 DPF3Q92784 378 aa12.23□□□□□ -0.45
LINC00538-201ENST00000626109 RUFY1Q96T51 708 aa12.23□□□□□ -0.45
LINC00538-201ENST00000626109 FAM129BQ96TA1 746 aa12.23□□□□□ -0.45
LINC00538-201ENST00000626109 OLFML3Q9NRN5 406 aa12.23□□□□□ -0.45
LINC00538-201ENST00000626109 NKIRAS2Q9NYR9 191 aa12.23□□□□□ -0.45
LINC00538-201ENST00000626109 AIPL1Q9NZN9 384 aa12.23□□□□□ -0.45
LINC00538-201ENST00000626109 TRHDEQ9UKU6 1024 aa12.23□□□□□ -0.45
LINC00538-201ENST00000626109 KIAA0100Q14667 2235 aaKnown RBP12.22□□□□□ -0.45
LINC00538-201ENST00000626109 CENPFP49454 3210 aa12.22□□□□□ -0.45
LINC00538-201ENST00000626109 H0YCG3 227 aa12.22□□□□□ -0.45
LINC00538-201ENST00000626109 CALUO43852 315 aaPredicted RBP12.22□□□□□ -0.45
LINC00538-201ENST00000626109 GUCA1CO95843 209 aa12.22□□□□□ -0.45
LINC00538-201ENST00000626109 SRGAP2CP0DJJ0 459 aa12.22□□□□□ -0.45
LINC00538-201ENST00000626109 THPOP40225 353 aa12.22□□□□□ -0.45
LINC00538-201ENST00000626109 PHKA2P46019 1235 aa12.22□□□□□ -0.45
LINC00538-201ENST00000626109 NPTX2P47972 431 aa12.22□□□□□ -0.45
LINC00538-201ENST00000626109 GPC3P51654 580 aa12.22□□□□□ -0.45
LINC00538-201ENST00000626109 NLRP11P59045 1033 aaKnown RBP12.22□□□□□ -0.45
LINC00538-201ENST00000626109 TMEM62Q0P6H9 643 aa12.22□□□□□ -0.45
LINC00538-201ENST00000626109 NNTQ13423 1086 aa12.22□□□□□ -0.45
LINC00538-201ENST00000626109 CAPSQ13938 189 aa12.22□□□□□ -0.45
LINC00538-201ENST00000626109 SLC18A3Q16572 532 aa12.22□□□□□ -0.45
LINC00538-201ENST00000626109 HGSNATQ68CP4 663 aa12.22□□□□□ -0.45
LINC00538-201ENST00000626109 RETSATQ6NUM9 610 aa12.22□□□□□ -0.45
LINC00538-201ENST00000626109 STXBP4Q6ZWJ1 553 aa12.22□□□□□ -0.45
LINC00538-201ENST00000626109 BEND5Q7L4P6 421 aa12.22□□□□□ -0.45
LINC00538-201ENST00000626109 FRMD5Q7Z6J6 570 aa12.22□□□□□ -0.45
LINC00538-201ENST00000626109 ZNF410Q86VK4 478 aa12.22□□□□□ -0.45
LINC00538-201ENST00000626109 KSR1Q8IVT5 923 aa12.22□□□□□ -0.45
LINC00538-201ENST00000626109 TRIM59Q8IWR1 403 aa12.22□□□□□ -0.45
LINC00538-201ENST00000626109 ZBTB8OSQ8IWT0 167 aa12.22□□□□□ -0.45
LINC00538-201ENST00000626109 IFT20Q8IY31 132 aa12.22□□□□□ -0.45
LINC00538-201ENST00000626109 FAM76AQ8TAV0 307 aa12.22□□□□□ -0.45
LINC00538-201ENST00000626109 MAML1Q92585 1016 aa12.22□□□□□ -0.45
LINC00538-201ENST00000626109 PPP1R16BQ96T49 567 aa12.22□□□□□ -0.45
LINC00538-201ENST00000626109 LRRC1Q9BTT6 524 aa12.22□□□□□ -0.45
LINC00538-201ENST00000626109 TBC1D7Q9P0N9 293 aa12.22□□□□□ -0.45
LINC00538-201ENST00000626109 STIM2Q9P246 746 aa12.22□□□□□ -0.45
LINC00538-201ENST00000626109 PPARGC1AQ9UBK2 798 aaKnown RBP12.22□□□□□ -0.45
LINC00538-201ENST00000626109 HSF2BPO75031 334 aa12.21□□□□□ -0.45
LINC00538-201ENST00000626109 MAPTP10636 758 aaKnown RBP12.21□□□□□ -0.45
LINC00538-201ENST00000626109 GGCXP38435 758 aa12.21□□□□□ -0.45
LINC00538-201ENST00000626109 MRPS6P82932 125 aaKnown RBP12.21□□□□□ -0.45
LINC00538-201ENST00000626109 KLHL30Q0D2K2 578 aa12.21□□□□□ -0.45
LINC00538-201ENST00000626109 LRRC74AQ0VAA2 488 aa12.21□□□□□ -0.45
LINC00538-201ENST00000626109 STRN3Q13033 797 aa12.21□□□□□ -0.45
LINC00538-201ENST00000626109 BFSP2Q13515 415 aa12.21□□□□□ -0.45
LINC00538-201ENST00000626109 NAB2Q15742 525 aa12.21□□□□□ -0.45
LINC00538-201ENST00000626109 KIZQ2M2Z5 673 aa12.21□□□□□ -0.45
LINC00538-201ENST00000626109 PDE12Q6L8Q7 609 aaKnown RBP12.21□□□□□ -0.45
LINC00538-201ENST00000626109 C8orf74Q6P047 294 aa12.21□□□□□ -0.45
LINC00538-201ENST00000626109 GBP6Q6ZN66 633 aa12.21□□□□□ -0.45
LINC00538-201ENST00000626109 ERMP1Q7Z2K6 904 aa12.21□□□□□ -0.45
LINC00538-201ENST00000626109 ZC3H3Q8IXZ2 948 aaKnown RBP12.21□□□□□ -0.45
LINC00538-201ENST00000626109 FAM169BQ8N8A8 192 aa12.21□□□□□ -0.45
LINC00538-201ENST00000626109 WNT8BQ93098 351 aa12.21□□□□□ -0.45
LINC00538-201ENST00000626109 LRGUKQ96M69 825 aa12.21□□□□□ -0.45
LINC00538-201ENST00000626109 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.21□□□□□ -0.45
LINC00538-201ENST00000626109 C2orf40Q9H1Z8 148 aa12.21□□□□□ -0.45
LINC00538-201ENST00000626109 CPSF2Q9P2I0 782 aaKnown RBP12.21□□□□□ -0.45
LINC00538-201ENST00000626109 GINS2Q9Y248 185 aa12.21□□□□□ -0.45
LINC00538-201ENST00000626109 TRPV2Q9Y5S1 764 aa12.21□□□□□ -0.45
LINC00538-201ENST00000626109 CFAP99D6REC4 459 aa12.21□□□□□ -0.46
LINC00538-201ENST00000626109 SLC16A4O15374 487 aa12.21□□□□□ -0.46
LINC00538-201ENST00000626109 P4HA2O15460 535 aa12.21□□□□□ -0.46
LINC00538-201ENST00000626109 PRPF6O94906 941 aaKnown RBP12.21□□□□□ -0.46
LINC00538-201ENST00000626109 GCNT3O95395 438 aa12.21□□□□□ -0.46
LINC00538-201ENST00000626109 CLTBP09497 229 aa12.21□□□□□ -0.46
LINC00538-201ENST00000626109 RPL13P26373 211 aaKnown RBP12.21□□□□□ -0.46
LINC00538-201ENST00000626109 ANXA13P27216 316 aa12.21□□□□□ -0.46
LINC00538-201ENST00000626109 NCKAP1LP55160 1127 aa12.21□□□□□ -0.46
LINC00538-201ENST00000626109 ADCY1Q08828 1119 aa12.21□□□□□ -0.46
LINC00538-201ENST00000626109 ALCAMQ13740 583 aa12.21□□□□□ -0.46
LINC00538-201ENST00000626109 RASA2Q15283 850 aa12.21□□□□□ -0.46
LINC00538-201ENST00000626109 TRIM71Q2Q1W2 868 aaKnown RBP12.21□□□□□ -0.46
LINC00538-201ENST00000626109 INTS11Q5TA45 600 aaKnown RBP12.21□□□□□ -0.46
LINC00538-201ENST00000626109 KLHDC7AQ5VTJ3 777 aa12.21□□□□□ -0.46
LINC00538-201ENST00000626109 CXorf57Q6NSI4 855 aaKnown RBP12.21□□□□□ -0.46
LINC00538-201ENST00000626109 CRTC1Q6UUV9 634 aa12.21□□□□□ -0.46
LINC00538-201ENST00000626109 ABRAXAS1Q6UWZ7 409 aa12.21□□□□□ -0.46
LINC00538-201ENST00000626109 DSTYKQ6XUX3 929 aa12.21□□□□□ -0.46
LINC00538-201ENST00000626109 NELFCDQ8IXH7 590 aa12.21□□□□□ -0.46
LINC00538-201ENST00000626109 ZNF668Q96K58 619 aaPredicted RBP12.21□□□□□ -0.46
LINC00538-201ENST00000626109 DHRS1Q96LJ7 313 aa12.21□□□□□ -0.46
LINC00538-201ENST00000626109 NTPCRQ9BSD7 190 aaKnown RBP12.21□□□□□ -0.46
LINC00538-201ENST00000626109 KIFC3Q9BVG8 833 aa12.21□□□□□ -0.46
LINC00538-201ENST00000626109 GCOM2Q9BZD3 368 aaPredicted RBP12.21□□□□□ -0.46
LINC00538-201ENST00000626109 ANLNQ9NQW6 1124 aa12.21□□□□□ -0.46
LINC00538-201ENST00000626109 TOPORSQ9NS56 1045 aaPredicted RBP12.21□□□□□ -0.46
LINC00538-201ENST00000626109 MTRRQ9UBK8 725 aa12.21□□□□□ -0.46
LINC00538-201ENST00000626109 CDY2AQ9Y6F7 541 aa12.21□□□□□ -0.46
LINC00538-201ENST00000626109 A0A087WZ62 844 aa12.2□□□□□ -0.46
LINC00538-201ENST00000626109 BTNL10A8MVZ5 291 aa12.2□□□□□ -0.46
LINC00538-201ENST00000626109 H0YHG0 523 aa12.2□□□□□ -0.46
LINC00538-201ENST00000626109 CES2O00748 559 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms