RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 JAM2P57087 298 aa15.21■□□□□ 0.03
VPS36-207ENST00000611132 RPL10AP62906 217 aaKnown RBP15.21■□□□□ 0.03
VPS36-207ENST00000611132 INPP5AQ14642 412 aa15.21■□□□□ 0.03
VPS36-207ENST00000611132 EMC2Q15006 297 aa15.21■□□□□ 0.03
VPS36-207ENST00000611132 C4orf50Q6ZRC1 276 aa15.21■□□□□ 0.03
VPS36-207ENST00000611132 PPP1R16BQ96T49 567 aa15.21■□□□□ 0.03
VPS36-207ENST00000611132 ILKAPQ9H0C8 392 aaPredicted RBP15.21■□□□□ 0.03
VPS36-207ENST00000611132 TASP1Q9H6P5 420 aa15.21■□□□□ 0.03
VPS36-207ENST00000611132 THAP1Q9NVV9 213 aa15.21■□□□□ 0.03
VPS36-207ENST00000611132 RICTORQ6R327 1708 aa15.21■□□□□ 0.03
VPS36-207ENST00000611132 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.21■□□□□ 0.02
VPS36-207ENST00000611132 FAM237BA0A1B0GVD1 139 aa15.21■□□□□ 0.02
VPS36-207ENST00000611132 ANPEPP15144 967 aa15.21■□□□□ 0.02
VPS36-207ENST00000611132 SP100P23497 879 aaPredicted RBP15.21■□□□□ 0.02
VPS36-207ENST00000611132 OASLQ15646 514 aaKnown RBP15.21■□□□□ 0.02
VPS36-207ENST00000611132 BOLA3Q53S33 107 aa15.21■□□□□ 0.02
VPS36-207ENST00000611132 ZDHHC24Q6UX98 284 aa15.21■□□□□ 0.02
VPS36-207ENST00000611132 ARMCX2Q7L311 632 aa15.21■□□□□ 0.02
VPS36-207ENST00000611132 PYDC1Q8WXC3 89 aa15.21■□□□□ 0.02
VPS36-207ENST00000611132 ASCC2Q9H1I8 757 aaPredicted RBP15.21■□□□□ 0.02
VPS36-207ENST00000611132 STXBP5LQ9Y2K9 1186 aa15.21■□□□□ 0.02
VPS36-207ENST00000611132 SMNDC1O75940 238 aaKnown RBP eCLIP15.2■□□□□ 0.02
VPS36-207ENST00000611132 CHEK2O96017 543 aa15.2■□□□□ 0.02
VPS36-207ENST00000611132 SPATA31C1P0DKV0 1188 aa15.2■□□□□ 0.02
VPS36-207ENST00000611132 PRKCEQ02156 737 aa15.2■□□□□ 0.02
VPS36-207ENST00000611132 PDPK2PQ6A1A2 396 aa15.2■□□□□ 0.02
VPS36-207ENST00000611132 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.2■□□□□ 0.02
VPS36-207ENST00000611132 AGAP3Q96P47 875 aa15.2■□□□□ 0.02
VPS36-207ENST00000611132 KRT82Q9NSB4 513 aa15.2■□□□□ 0.02
VPS36-207ENST00000611132 LZTS1Q9Y250 596 aa15.2■□□□□ 0.02
VPS36-207ENST00000611132 MROH7Q68CQ1 1323 aa15.2■□□□□ 0.02
VPS36-207ENST00000611132 GSC2O15499 205 aa15.2■□□□□ 0.02
VPS36-207ENST00000611132 NPTXRO95502 500 aa15.2■□□□□ 0.02
VPS36-207ENST00000611132 SERPINB5P36952 375 aa15.2■□□□□ 0.02
VPS36-207ENST00000611132 SLC12A1Q13621 1099 aa15.2■□□□□ 0.02
VPS36-207ENST00000611132 TKFCQ3LXA3 575 aa15.2■□□□□ 0.02
VPS36-207ENST00000611132 ITPRIPL1Q6GPH6 555 aa15.2■□□□□ 0.02
VPS36-207ENST00000611132 SLC4A9Q96Q91 983 aa15.2■□□□□ 0.02
VPS36-207ENST00000611132 MRGBPQ9NV56 204 aa15.2■□□□□ 0.02
VPS36-207ENST00000611132 FOXO6A8MYZ6 492 aa15.2■□□□□ 0.02
VPS36-207ENST00000611132 LSM8O95777 96 aaKnown RBP15.2■□□□□ 0.02
VPS36-207ENST00000611132 FAM58BPP0C7Q3 252 aa15.2■□□□□ 0.02
VPS36-207ENST00000611132 RALBP11234 206 aa15.2■□□□□ 0.02
VPS36-207ENST00000611132 RAG1P15918 1043 aa15.2■□□□□ 0.02
VPS36-207ENST00000611132 GCLCP48506 637 aaPredicted RBP15.2■□□□□ 0.02
VPS36-207ENST00000611132 TMED10P49755 219 aaKnown RBP15.2■□□□□ 0.02
VPS36-207ENST00000611132 RGS7P49802 495 aa15.2■□□□□ 0.02
VPS36-207ENST00000611132 SERPINB8P50452 374 aa15.2■□□□□ 0.02
VPS36-207ENST00000611132 RIPOR1Q6ZS17 1223 aa15.2■□□□□ 0.02
VPS36-207ENST00000611132 PRUNE1Q86TP1 453 aa15.2■□□□□ 0.02
VPS36-207ENST00000611132 ASAP3Q8TDY4 903 aa15.2■□□□□ 0.02
VPS36-207ENST00000611132 ZNF668Q96K58 619 aaPredicted RBP15.2■□□□□ 0.02
VPS36-207ENST00000611132 ZFRQ96KR1 1074 aaKnown RBP15.2■□□□□ 0.02
VPS36-207ENST00000611132 FBXO6Q9NRD1 293 aaPredicted RBP15.2■□□□□ 0.02
VPS36-207ENST00000611132 SLC5A4Q9NY91 659 aa15.2■□□□□ 0.02
VPS36-207ENST00000611132 APPL1Q9UKG1 709 aa15.2■□□□□ 0.02
VPS36-207ENST00000611132 PFDN6O15212 129 aa15.2■□□□□ 0.02
VPS36-207ENST00000611132 LIASO43766 372 aa15.2■□□□□ 0.02
VPS36-207ENST00000611132 ETS1P14921 441 aa15.2■□□□□ 0.02
VPS36-207ENST00000611132 RNF149Q8NC42 400 aa15.2■□□□□ 0.02
VPS36-207ENST00000611132 GIPC2Q8TF65 315 aa15.2■□□□□ 0.02
VPS36-207ENST00000611132 AGBL1Q96MI9 1066 aa15.2■□□□□ 0.02
VPS36-207ENST00000611132 EFCAB1Q9HAE3 211 aa15.2■□□□□ 0.02
VPS36-207ENST00000611132 STX18Q9P2W9 335 aaKnown RBP15.2■□□□□ 0.02
VPS36-207ENST00000611132 STAP1Q9ULZ2 295 aa15.2■□□□□ 0.02
VPS36-207ENST00000611132 TNFAIP8O95379 198 aa15.19■□□□□ 0.02
VPS36-207ENST00000611132 PRKCBP05771 671 aa15.19■□□□□ 0.02
VPS36-207ENST00000611132 NR3C2P08235 984 aa15.19■□□□□ 0.02
VPS36-207ENST00000611132 CNTFP26441 200 aa15.19■□□□□ 0.02
VPS36-207ENST00000611132 TCHHL1Q5QJ38 904 aaPredicted RBP15.19■□□□□ 0.02
VPS36-207ENST00000611132 PALB2Q86YC2 1186 aa15.19■□□□□ 0.02
VPS36-207ENST00000611132 FAM81AQ8TBF8 368 aa15.19■□□□□ 0.02
VPS36-207ENST00000611132 ZNF606Q8WXB4 792 aa15.19■□□□□ 0.02
VPS36-207ENST00000611132 ATP6V1E2Q96A05 226 aa15.19■□□□□ 0.02
VPS36-207ENST00000611132 ECSITQ9BQ95 431 aa15.19■□□□□ 0.02
VPS36-207ENST00000611132 SPC25Q9HBM1 224 aa15.19■□□□□ 0.02
VPS36-207ENST00000611132 BCL9O00512 1426 aa15.19■□□□□ 0.02
VPS36-207ENST00000611132 POLRMTO00411 1230 aaKnown RBP15.19■□□□□ 0.02
VPS36-207ENST00000611132 TPBGLP0DKB5 382 aa15.19■□□□□ 0.02
VPS36-207ENST00000611132 SPOCK2Q92563 424 aa15.19■□□□□ 0.02
VPS36-207ENST00000611132 SHISA4Q96DD7 197 aa15.19■□□□□ 0.02
VPS36-207ENST00000611132 NRDE2Q9H7Z3 1164 aa15.19■□□□□ 0.02
VPS36-207ENST00000611132 ARL8BQ9NVJ2 186 aa15.19■□□□□ 0.02
VPS36-207ENST00000611132 DRG1Q9Y295 367 aaKnown RBP15.19■□□□□ 0.02
VPS36-207ENST00000611132 CNTNAP4Q9C0A0 1308 aa15.19■□□□□ 0.02
VPS36-207ENST00000611132 A0A1W2PPM1 405 aa15.19■□□□□ 0.02
VPS36-207ENST00000611132 E9PBE3 544 aa15.19■□□□□ 0.02
VPS36-207ENST00000611132 KDM1AO60341 852 aa15.19■□□□□ 0.02
VPS36-207ENST00000611132 KLHL41O60662 606 aa15.19■□□□□ 0.02
VPS36-207ENST00000611132 MAP3K6O95382 1288 aa15.19■□□□□ 0.02
VPS36-207ENST00000611132 FESP07332 822 aa15.19■□□□□ 0.02
VPS36-207ENST00000611132 PPIDQ08752 370 aaKnown RBP15.19■□□□□ 0.02
VPS36-207ENST00000611132 USP10Q14694 798 aaKnown RBP15.19■□□□□ 0.02
VPS36-207ENST00000611132 FAM163AQ96GL9 167 aaPredicted RBP15.19■□□□□ 0.02
VPS36-207ENST00000611132 CCDC90BQ9GZT6 254 aa15.19■□□□□ 0.02
VPS36-207ENST00000611132 BTBD7Q9P203 1132 aa15.19■□□□□ 0.02
VPS36-207ENST00000611132 SMIM31A0A1B0GVY4 71 aa15.18■□□□□ 0.02
VPS36-207ENST00000611132 SYCE1LA8MT33 242 aa15.18■□□□□ 0.02
VPS36-207ENST00000611132 ANKRD63C9JTQ0 380 aa15.18■□□□□ 0.02
VPS36-207ENST00000611132 PRPF4O43172 522 aaKnown RBP eCLIP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms