RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 C7orf25Q9BPX7 421 aa6.34□□□□□ -1.39
SF3B3-214ENST00000572365 IDI2Q9BXS1 227 aa6.34□□□□□ -1.39
SF3B3-214ENST00000572365 BARX1Q9HBU1 254 aaPredicted RBP6.34□□□□□ -1.39
SF3B3-214ENST00000572365 STARD7Q9NQZ5 370 aa6.34□□□□□ -1.39
SF3B3-214ENST00000572365 MAN1C1Q9NR34 630 aa6.34□□□□□ -1.39
SF3B3-214ENST00000572365 MTUS1Q9ULD2 1270 aa6.34□□□□□ -1.39
SF3B3-214ENST00000572365 MROH5Q6ZUA9 1318 aa6.33□□□□□ -1.4
SF3B3-214ENST00000572365 MYBBP1AQ9BQG0 1328 aaKnown RBP6.33□□□□□ -1.4
SF3B3-214ENST00000572365 MYO5AQ9Y4I1 1855 aaKnown RBP6.33□□□□□ -1.4
SF3B3-214ENST00000572365 KRTAP4-8A0A0G2JLE6 195 aa6.33□□□□□ -1.4
SF3B3-214ENST00000572365 GRM8O00222 908 aa6.33□□□□□ -1.4
SF3B3-214ENST00000572365 SGTAO43765 313 aa6.33□□□□□ -1.4
SF3B3-214ENST00000572365 TUSC2O75896 110 aa6.33□□□□□ -1.4
SF3B3-214ENST00000572365 HRGP04196 525 aa6.33□□□□□ -1.4
SF3B3-214ENST00000572365 CYP1A1P04798 512 aaPredicted RBP6.33□□□□□ -1.4
SF3B3-214ENST00000572365 PGK2P07205 417 aa6.33□□□□□ -1.4
SF3B3-214ENST00000572365 IFIT1P09914 478 aaKnown RBP6.33□□□□□ -1.4
SF3B3-214ENST00000572365 NBPF7P0C2Y1 421 aaPredicted RBP6.33□□□□□ -1.4
SF3B3-214ENST00000572365 ZNF888P0CJ79 500 aaPredicted RBP6.33□□□□□ -1.4
SF3B3-214ENST00000572365 KCNA5P22460 613 aa6.33□□□□□ -1.4
SF3B3-214ENST00000572365 ECHS1P30084 290 aa6.33□□□□□ -1.4
SF3B3-214ENST00000572365 ADORA1P30542 326 aa6.33□□□□□ -1.4
SF3B3-214ENST00000572365 KIR2DL3P43628 341 aa6.33□□□□□ -1.4
SF3B3-214ENST00000572365 PHKA1P46020 1223 aa6.33□□□□□ -1.4
SF3B3-214ENST00000572365 SLC6A9P48067 706 aa6.33□□□□□ -1.4
SF3B3-214ENST00000572365 ACLYP53396 1101 aa6.33□□□□□ -1.4
SF3B3-214ENST00000572365 USP14P54578 494 aa6.33□□□□□ -1.4
SF3B3-214ENST00000572365 LINC00310P59036 64 aa6.33□□□□□ -1.4
SF3B3-214ENST00000572365 IL10RAQ13651 578 aa6.33□□□□□ -1.4
SF3B3-214ENST00000572365 GRB14Q14449 540 aa6.33□□□□□ -1.4
SF3B3-214ENST00000572365 BEND3Q5T5X7 828 aa6.33□□□□□ -1.4
SF3B3-214ENST00000572365 AGBL4Q5VU57 503 aa6.33□□□□□ -1.4
SF3B3-214ENST00000572365 MCTP2Q6DN12 878 aa6.33□□□□□ -1.4
SF3B3-214ENST00000572365 PPP4R3AQ6IN85 833 aa6.33□□□□□ -1.4
SF3B3-214ENST00000572365 OVCH2Q7RTZ1 564 aa6.33□□□□□ -1.4
SF3B3-214ENST00000572365 SRGAP1Q7Z6B7 1085 aa6.33□□□□□ -1.4
SF3B3-214ENST00000572365 DEFB128Q7Z7B8 93 aa6.33□□□□□ -1.4
SF3B3-214ENST00000572365 TMEM199Q8N511 208 aa6.33□□□□□ -1.4
SF3B3-214ENST00000572365 CAMKK1Q8N5S9 505 aa6.33□□□□□ -1.4
SF3B3-214ENST00000572365 MSL3Q8N5Y2 521 aaKnown RBP6.33□□□□□ -1.4
SF3B3-214ENST00000572365 VGLL2Q8N8G2 317 aa6.33□□□□□ -1.4
SF3B3-214ENST00000572365 PLA2G15Q8NCC3 412 aa6.33□□□□□ -1.4
SF3B3-214ENST00000572365 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.33□□□□□ -1.4
SF3B3-214ENST00000572365 ACER1Q8TDN7 264 aa6.33□□□□□ -1.4
SF3B3-214ENST00000572365 ADAMTS17Q8TE56 1095 aa6.33□□□□□ -1.4
SF3B3-214ENST00000572365 TTC17Q96AE7 1141 aa6.33□□□□□ -1.4
SF3B3-214ENST00000572365 MBD6Q96DN6 1003 aa6.33□□□□□ -1.4
SF3B3-214ENST00000572365 KIAA1683Q9H0B3 1180 aa6.33□□□□□ -1.4
SF3B3-214ENST00000572365 OSBPL5Q9H0X9 879 aaPredicted RBP6.33□□□□□ -1.4
SF3B3-214ENST00000572365 OR10A2Q9H208 303 aa6.33□□□□□ -1.4
SF3B3-214ENST00000572365 TMEM60Q9H2L4 133 aa6.33□□□□□ -1.4
SF3B3-214ENST00000572365 BICC1Q9H694 974 aaKnown RBP6.33□□□□□ -1.4
SF3B3-214ENST00000572365 AS3MTQ9HBK9 375 aa6.33□□□□□ -1.4
SF3B3-214ENST00000572365 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.33□□□□□ -1.4
SF3B3-214ENST00000572365 TBX21Q9UL17 535 aa6.33□□□□□ -1.4
SF3B3-214ENST00000572365 COG5Q9UP83 839 aa6.33□□□□□ -1.4
SF3B3-214ENST00000572365 SIK3Q9Y2K2 1263 aa6.33□□□□□ -1.4
SF3B3-214ENST00000572365 PCDHB1Q9Y5F3 818 aa6.33□□□□□ -1.4
SF3B3-214ENST00000572365 SLC4A7Q9Y6M7 1214 aa6.33□□□□□ -1.4
SF3B3-214ENST00000572365 MYO10Q9HD67 2058 aa6.33□□□□□ -1.4
SF3B3-214ENST00000572365 SPTBN2O15020 2390 aa6.32□□□□□ -1.4
SF3B3-214ENST00000572365 SIPA1L1O43166 1804 aa6.32□□□□□ -1.4
SF3B3-214ENST00000572365 COL11A1P12107 1806 aaPredicted RBP6.32□□□□□ -1.4
SF3B3-214ENST00000572365 A0A1B0GTL3 188 aa6.32□□□□□ -1.4
SF3B3-214ENST00000572365 A6NNZ2 444 aa6.32□□□□□ -1.4
SF3B3-214ENST00000572365 H3BQ06 376 aaPredicted RBP6.32□□□□□ -1.4
SF3B3-214ENST00000572365 MTSS1O43312 755 aa6.32□□□□□ -1.4
SF3B3-214ENST00000572365 ALDH1A2O94788 518 aa6.32□□□□□ -1.4
SF3B3-214ENST00000572365 ALDH2P05091 517 aa6.32□□□□□ -1.4
SF3B3-214ENST00000572365 RPLP2P05387 115 aaKnown RBP6.32□□□□□ -1.4
SF3B3-214ENST00000572365 RARBP10826 455 aa6.32□□□□□ -1.4
SF3B3-214ENST00000572365 FGFR2P21802 821 aa6.32□□□□□ -1.4
SF3B3-214ENST00000572365 IL12RB1P42701 662 aa6.32□□□□□ -1.4
SF3B3-214ENST00000572365 AFF3P51826 1226 aaKnown RBP6.32□□□□□ -1.4
SF3B3-214ENST00000572365 RHBDL3P58872 404 aa6.32□□□□□ -1.4
SF3B3-214ENST00000572365 TWISTNBQ3B726 338 aaPredicted RBP6.32□□□□□ -1.4
SF3B3-214ENST00000572365 TTC7BQ86TV6 843 aa6.32□□□□□ -1.4
SF3B3-214ENST00000572365 ZNF761Q86XN6 746 aaPredicted RBP6.32□□□□□ -1.4
SF3B3-214ENST00000572365 DZIP1Q86YF9 867 aaKnown RBP6.32□□□□□ -1.4
SF3B3-214ENST00000572365 ADGRG2Q8IZP9 1017 aa6.32□□□□□ -1.4
SF3B3-214ENST00000572365 POU5F2Q8N7G0 328 aa6.32□□□□□ -1.4
SF3B3-214ENST00000572365 LINC01356Q8N9X3 169 aa6.32□□□□□ -1.4
SF3B3-214ENST00000572365 PPP1R35Q8TAP8 253 aa6.32□□□□□ -1.4
SF3B3-214ENST00000572365 NSUN6Q8TEA1 469 aaKnown RBP6.32□□□□□ -1.4
SF3B3-214ENST00000572365 ZNF384Q8TF68 577 aa6.32□□□□□ -1.4
SF3B3-214ENST00000572365 GDPD5Q8WTR4 605 aa6.32□□□□□ -1.4
SF3B3-214ENST00000572365 ZNF480Q8WV37 535 aa6.32□□□□□ -1.4
SF3B3-214ENST00000572365 GCDHQ92947 438 aaPredicted RBP6.32□□□□□ -1.4
SF3B3-214ENST00000572365 KAT5Q92993 513 aa6.32□□□□□ -1.4
SF3B3-214ENST00000572365 SLC7A6OSQ96CW6 309 aaPredicted RBP6.32□□□□□ -1.4
SF3B3-214ENST00000572365 SLC38A3Q99624 504 aa6.32□□□□□ -1.4
SF3B3-214ENST00000572365 MOV10L1Q9BXT6 1211 aaKnown RBP6.32□□□□□ -1.4
SF3B3-214ENST00000572365 ZNF700Q9H0M5 742 aa6.32□□□□□ -1.4
SF3B3-214ENST00000572365 SIL1Q9H173 461 aa6.32□□□□□ -1.4
SF3B3-214ENST00000572365 FAM204AQ9H8W3 233 aa6.32□□□□□ -1.4
SF3B3-214ENST00000572365 BCO1Q9HAY6 547 aa6.32□□□□□ -1.4
SF3B3-214ENST00000572365 IL23AQ9NPF7 189 aa6.32□□□□□ -1.4
SF3B3-214ENST00000572365 TRPS1Q9UHF7 1281 aa6.32□□□□□ -1.4
SF3B3-214ENST00000572365 RABGAP1Q9Y3P9 1069 aa6.32□□□□□ -1.4
SF3B3-214ENST00000572365 PCDHA13Q9Y5I0 950 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms