RNA–Protein interactions for RNA: ENST00000563911.5

HERPUD1-208, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 844 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-208ENST00000563911 DOCK1Q14185 1865 aa6.94□□□□□ -1.3
HERPUD1-208ENST00000563911 EYA2O00167 538 aa6.94□□□□□ -1.3
HERPUD1-208ENST00000563911 NRP1O14786 923 aa6.94□□□□□ -1.3
HERPUD1-208ENST00000563911 ADCY6O43306 1168 aa6.94□□□□□ -1.3
HERPUD1-208ENST00000563911 MTSS1O43312 755 aa6.94□□□□□ -1.3
HERPUD1-208ENST00000563911 NOBOXO60393 691 aa6.94□□□□□ -1.3
HERPUD1-208ENST00000563911 HTR1BP28222 390 aa6.94□□□□□ -1.3
HERPUD1-208ENST00000563911 CASRP41180 1078 aa6.94□□□□□ -1.3
HERPUD1-208ENST00000563911 GCLCP48506 637 aaPredicted RBP6.94□□□□□ -1.3
HERPUD1-208ENST00000563911 NFYCQ13952 458 aa6.94□□□□□ -1.3
HERPUD1-208ENST00000563911 NT5DC1Q5TFE4 455 aa6.94□□□□□ -1.3
HERPUD1-208ENST00000563911 REPS2Q8NFH8 660 aa6.94□□□□□ -1.3
HERPUD1-208ENST00000563911 NSUN6Q8TEA1 469 aaKnown RBP6.94□□□□□ -1.3
HERPUD1-208ENST00000563911 STON2Q8WXE9 905 aa6.94□□□□□ -1.3
HERPUD1-208ENST00000563911 LPIN2Q92539 896 aa6.94□□□□□ -1.3
HERPUD1-208ENST00000563911 BADQ92934 168 aa6.94□□□□□ -1.3
HERPUD1-208ENST00000563911 TTC17Q96AE7 1141 aa6.94□□□□□ -1.3
HERPUD1-208ENST00000563911 TMX3Q96JJ7 454 aa6.94□□□□□ -1.3
HERPUD1-208ENST00000563911 LANCL2Q9NS86 450 aa6.94□□□□□ -1.3
HERPUD1-208ENST00000563911 SLC4A7Q9Y6M7 1214 aa6.94□□□□□ -1.3
HERPUD1-208ENST00000563911 SALL1Q9NSC2 1324 aa6.94□□□□□ -1.3
HERPUD1-208ENST00000563911 CHD9Q3L8U1 2897 aa6.94□□□□□ -1.3
HERPUD1-208ENST00000563911 MAST2Q6P0Q8 1798 aa6.93□□□□□ -1.3
HERPUD1-208ENST00000563911 SIPA1L1O43166 1804 aa6.93□□□□□ -1.3
HERPUD1-208ENST00000563911 GPR75-ASB3A0A0A6YYF3 556 aa6.93□□□□□ -1.3
HERPUD1-208ENST00000563911 SLC16A6O15403 523 aa6.93□□□□□ -1.3
HERPUD1-208ENST00000563911 B3GALT2O43825 422 aa6.93□□□□□ -1.3
HERPUD1-208ENST00000563911 B4GALT3O60512 393 aa6.93□□□□□ -1.3
HERPUD1-208ENST00000563911 TUSC2O75896 110 aa6.93□□□□□ -1.3
HERPUD1-208ENST00000563911 IFIT1P09914 478 aaKnown RBP6.93□□□□□ -1.3
HERPUD1-208ENST00000563911 HOXA7P31268 230 aaPredicted RBP6.93□□□□□ -1.3
HERPUD1-208ENST00000563911 BTDP43251 543 aa6.93□□□□□ -1.3
HERPUD1-208ENST00000563911 MAP2K6P52564 334 aa6.93□□□□□ -1.3
HERPUD1-208ENST00000563911 RAC3P60763 192 aa6.93□□□□□ -1.3
HERPUD1-208ENST00000563911 TIMM10P62072 90 aa6.93□□□□□ -1.3
HERPUD1-208ENST00000563911 PURAQ00577 322 aaKnown RBP6.93□□□□□ -1.3
HERPUD1-208ENST00000563911 MECOMQ03112 1051 aa6.93□□□□□ -1.3
HERPUD1-208ENST00000563911 COBLL1Q53SF7 1204 aa6.93□□□□□ -1.3
HERPUD1-208ENST00000563911 ANO1Q5XXA6 986 aa6.93□□□□□ -1.3
HERPUD1-208ENST00000563911 CCDC149Q6ZUS6 474 aa6.93□□□□□ -1.3
HERPUD1-208ENST00000563911 CHST15Q7LFX5 561 aaPredicted RBP6.93□□□□□ -1.3
HERPUD1-208ENST00000563911 GPR142Q7Z601 462 aa6.93□□□□□ -1.3
HERPUD1-208ENST00000563911 SRGAP1Q7Z6B7 1085 aa6.93□□□□□ -1.3
HERPUD1-208ENST00000563911 CMTM4Q8IZR5 234 aa6.93□□□□□ -1.3
HERPUD1-208ENST00000563911 LILRA3Q8N6C8 439 aaPredicted RBP6.93□□□□□ -1.3
HERPUD1-208ENST00000563911 C3orf20Q8ND61 904 aa6.93□□□□□ -1.3
HERPUD1-208ENST00000563911 FBXO18Q8NFZ0 1043 aa6.93□□□□□ -1.3
HERPUD1-208ENST00000563911 MDM1Q8TC05 714 aa6.93□□□□□ -1.3
HERPUD1-208ENST00000563911 RABGGTAQ92696 567 aa6.93□□□□□ -1.3
HERPUD1-208ENST00000563911 TOX2Q96NM4 488 aa6.93□□□□□ -1.3
HERPUD1-208ENST00000563911 GPHA2Q96T91 129 aa6.93□□□□□ -1.3
HERPUD1-208ENST00000563911 SARGQ9BW04 601 aa6.93□□□□□ -1.3
HERPUD1-208ENST00000563911 TMEM140Q9NV12 185 aa6.93□□□□□ -1.3
HERPUD1-208ENST00000563911 AJAP1Q9UKB5 411 aaPredicted RBP6.93□□□□□ -1.3
HERPUD1-208ENST00000563911 PA2G4Q9UQ80 394 aaKnown RBP6.93□□□□□ -1.3
HERPUD1-208ENST00000563911 FAM50BQ9Y247 325 aa6.93□□□□□ -1.3
HERPUD1-208ENST00000563911 POLHQ9Y253 713 aa6.93□□□□□ -1.3
HERPUD1-208ENST00000563911 LRRC14BA6NHZ5 514 aa6.92□□□□□ -1.3
HERPUD1-208ENST00000563911 A6NNZ2 444 aa6.92□□□□□ -1.3
HERPUD1-208ENST00000563911 SLC26A4O43511 780 aa6.92□□□□□ -1.3
HERPUD1-208ENST00000563911 C8AP07357 584 aa6.92□□□□□ -1.3
HERPUD1-208ENST00000563911 SLC5A1P13866 664 aa6.92□□□□□ -1.3
HERPUD1-208ENST00000563911 TRIM27P14373 513 aa6.92□□□□□ -1.3
HERPUD1-208ENST00000563911 FOSL2P15408 326 aa6.92□□□□□ -1.3
HERPUD1-208ENST00000563911 ZKSCAN1P17029 563 aaPredicted RBP6.92□□□□□ -1.3
HERPUD1-208ENST00000563911 DDCP20711 480 aa6.92□□□□□ -1.3
HERPUD1-208ENST00000563911 USP14P54578 494 aa6.92□□□□□ -1.3
HERPUD1-208ENST00000563911 NPEPPSP55786 919 aa6.92□□□□□ -1.3
HERPUD1-208ENST00000563911 BACE1P56817 501 aa6.92□□□□□ -1.3
HERPUD1-208ENST00000563911 TARDBPQ13148 414 aaKnown RBP eCLIP6.92□□□□□ -1.33e-7■■□□□ 12.3
HERPUD1-208ENST00000563911 GALEQ14376 348 aa6.92□□□□□ -1.3
HERPUD1-208ENST00000563911 KHDC1Q4VXA5 237 aaKnown RBP6.92□□□□□ -1.3
HERPUD1-208ENST00000563911 PRAMEF19Q5SWL8 479 aa6.92□□□□□ -1.3
HERPUD1-208ENST00000563911 SLC39A5Q6ZMH5 540 aa6.92□□□□□ -1.3
HERPUD1-208ENST00000563911 ARHGEF18Q6ZSZ5 1173 aa6.92□□□□□ -1.3
HERPUD1-208ENST00000563911 PDZD4Q76G19 769 aaPredicted RBP6.92□□□□□ -1.3
HERPUD1-208ENST00000563911 PLEKHH3Q7Z736 793 aa6.92□□□□□ -1.3
HERPUD1-208ENST00000563911 DAAM2Q86T65 1068 aa6.92□□□□□ -1.3
HERPUD1-208ENST00000563911 TRMT2AQ8IZ69 625 aaKnown RBP6.92□□□□□ -1.3
HERPUD1-208ENST00000563911 GPRC5AQ8NFJ5 357 aa6.92□□□□□ -1.3
HERPUD1-208ENST00000563911 CDK5RAP3Q96JB5 506 aa6.92□□□□□ -1.3
HERPUD1-208ENST00000563911 VRK1Q99986 396 aaPredicted RBP6.92□□□□□ -1.3
HERPUD1-208ENST00000563911 SIL1Q9H173 461 aa6.92□□□□□ -1.3
HERPUD1-208ENST00000563911 TMEM60Q9H2L4 133 aa6.92□□□□□ -1.3
HERPUD1-208ENST00000563911 PCDHA3Q9Y5H8 950 aa6.92□□□□□ -1.3
HERPUD1-208ENST00000563911 FRMPD3Q5JV73 1810 aa6.92□□□□□ -1.3
HERPUD1-208ENST00000563911 MYH2Q9UKX2 1941 aa6.91□□□□□ -1.3
HERPUD1-208ENST00000563911 MYH13Q9UKX3 1938 aa6.91□□□□□ -1.3
HERPUD1-208ENST00000563911 UBE2QL1A1L167 161 aa6.91□□□□□ -1.3
HERPUD1-208ENST00000563911 GRXCR1A8MXD5 290 aa6.91□□□□□ -1.3
HERPUD1-208ENST00000563911 FAM227AF5H4B4 570 aa6.91□□□□□ -1.3
HERPUD1-208ENST00000563911 TPP1O14773 563 aa6.91□□□□□ -1.3
HERPUD1-208ENST00000563911 GPR32O75388 356 aa6.91□□□□□ -1.3
HERPUD1-208ENST00000563911 AMY1AP04745 511 aa6.91□□□□□ -1.3
HERPUD1-208ENST00000563911 PLA2G5P39877 138 aa6.91□□□□□ -1.3
HERPUD1-208ENST00000563911 IL12RB1P42701 662 aa6.91□□□□□ -1.3
HERPUD1-208ENST00000563911 APBA1Q02410 837 aa6.91□□□□□ -1.3
HERPUD1-208ENST00000563911 RAB39AQ14964 217 aa6.91□□□□□ -1.3
HERPUD1-208ENST00000563911 ATP2B3Q16720 1220 aa6.91□□□□□ -1.3
HERPUD1-208ENST00000563911 TRIM60Q495X7 471 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms