RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 NDUFA10O95299 355 aa6.36□□□□□ -1.39
SSR3-208ENST00000496050 SRGAP2BP0DMP2 458 aa6.36□□□□□ -1.39
SSR3-208ENST00000496050 HOXA5P20719 270 aa6.36□□□□□ -1.39
SSR3-208ENST00000496050 BMPR1AP36894 532 aa6.36□□□□□ -1.39
SSR3-208ENST00000496050 TOB2Q14106 344 aaPredicted RBP6.36□□□□□ -1.39
SSR3-208ENST00000496050 TRIM71Q2Q1W2 868 aaKnown RBP6.36□□□□□ -1.39
SSR3-208ENST00000496050 ARHGAP15Q53QZ3 475 aa6.36□□□□□ -1.39
SSR3-208ENST00000496050 CERCAMQ5T4B2 595 aa6.36□□□□□ -1.39
SSR3-208ENST00000496050 TMTC4Q5T4D3 741 aa6.36□□□□□ -1.39
SSR3-208ENST00000496050 RGS7BPQ6MZT1 257 aaPredicted RBP6.36□□□□□ -1.39
SSR3-208ENST00000496050 ZNF585AQ6P3V2 769 aa6.36□□□□□ -1.39
SSR3-208ENST00000496050 DNAJB14Q8TBM8 379 aa6.36□□□□□ -1.39
SSR3-208ENST00000496050 STYXQ8WUJ0 223 aa6.36□□□□□ -1.39
SSR3-208ENST00000496050 BDH2Q9BUT1 245 aa6.36□□□□□ -1.39
SSR3-208ENST00000496050 SLC25A32Q9H2D1 315 aa6.36□□□□□ -1.39
SSR3-208ENST00000496050 AS3MTQ9HBK9 375 aa6.36□□□□□ -1.39
SSR3-208ENST00000496050 HELLSQ9NRZ9 838 aa6.36□□□□□ -1.39
SSR3-208ENST00000496050 DNAJB11Q9UBS4 358 aa6.36□□□□□ -1.39
SSR3-208ENST00000496050 HERC5Q9UII4 1024 aaKnown RBP6.36□□□□□ -1.39
SSR3-208ENST00000496050 ST6GALNAC2Q9UJ37 374 aa6.36□□□□□ -1.39
SSR3-208ENST00000496050 TESMINQ9Y4I5 508 aa6.36□□□□□ -1.39
SSR3-208ENST00000496050 TRGV11A0A075B6L2 103 aa6.35□□□□□ -1.39
SSR3-208ENST00000496050 K7ESM1 405 aa6.35□□□□□ -1.39
SSR3-208ENST00000496050 CD3EAPO15446 510 aaKnown RBP6.35□□□□□ -1.39
SSR3-208ENST00000496050 SH3BP5O60239 455 aa6.35□□□□□ -1.39
SSR3-208ENST00000496050 FAM20BO75063 409 aa6.35□□□□□ -1.39
SSR3-208ENST00000496050 NTSR2O95665 410 aa6.35□□□□□ -1.39
SSR3-208ENST00000496050 ITGA2BP08514 1039 aa6.35□□□□□ -1.39
SSR3-208ENST00000496050 NPPBP16860 134 aa6.35□□□□□ -1.39
SSR3-208ENST00000496050 GATA3P23771 443 aa6.35□□□□□ -1.39
SSR3-208ENST00000496050 SLC5A2P31639 672 aa6.35□□□□□ -1.39
SSR3-208ENST00000496050 GATMP50440 423 aa6.35□□□□□ -1.39
SSR3-208ENST00000496050 VAV2P52735 878 aa6.35□□□□□ -1.39
SSR3-208ENST00000496050 POU5F1BQ06416 359 aa6.35□□□□□ -1.39
SSR3-208ENST00000496050 NFIXQ14938 502 aa6.35□□□□□ -1.39
SSR3-208ENST00000496050 GEN1Q17RS7 908 aa6.35□□□□□ -1.39
SSR3-208ENST00000496050 TTC30AQ86WT1 665 aa6.35□□□□□ -1.39
SSR3-208ENST00000496050 CCDC117Q8IWD4 279 aaPredicted RBP6.35□□□□□ -1.39
SSR3-208ENST00000496050 TTC9BQ8N6N2 239 aa6.35□□□□□ -1.39
SSR3-208ENST00000496050 PAF1Q8N7H5 531 aa6.35□□□□□ -1.39
SSR3-208ENST00000496050 ABHD5Q8WTS1 349 aa6.35□□□□□ -1.39
SSR3-208ENST00000496050 NACC2Q96BF6 587 aa6.35□□□□□ -1.39
SSR3-208ENST00000496050 FAM136AQ96C01 138 aa6.35□□□□□ -1.39
SSR3-208ENST00000496050 GCC1Q96CN9 775 aa6.35□□□□□ -1.39
SSR3-208ENST00000496050 ZDHHC12Q96GR4 267 aa6.35□□□□□ -1.39
SSR3-208ENST00000496050 HIST1H2AAQ96QV6 131 aa6.35□□□□□ -1.39
SSR3-208ENST00000496050 FAM167BQ9BTA0 163 aa6.35□□□□□ -1.39
SSR3-208ENST00000496050 UBA5Q9GZZ9 404 aa6.35□□□□□ -1.39
SSR3-208ENST00000496050 KLC2Q9H0B6 622 aa6.35□□□□□ -1.39
SSR3-208ENST00000496050 ZNF768Q9H5H4 540 aaKnown RBP6.35□□□□□ -1.39
SSR3-208ENST00000496050 USP22Q9UPT9 525 aa6.35□□□□□ -1.39
SSR3-208ENST00000496050 DTNAQ9Y4J8 743 aa6.35□□□□□ -1.39
SSR3-208ENST00000496050 TRIM38O00635 465 aa6.34□□□□□ -1.39
SSR3-208ENST00000496050 IRAK2O43187 625 aa6.34□□□□□ -1.39
SSR3-208ENST00000496050 CDKL5O76039 1030 aa6.34□□□□□ -1.39
SSR3-208ENST00000496050 ZFPL1O95159 310 aa6.34□□□□□ -1.39
SSR3-208ENST00000496050 PECAM1P16284 738 aaPredicted RBP6.34□□□□□ -1.39
SSR3-208ENST00000496050 LAG3P18627 525 aa6.34□□□□□ -1.39
SSR3-208ENST00000496050 DDX6P26196 483 aaKnown RBP eCLIP6.34□□□□□ -1.39
SSR3-208ENST00000496050 EPHA3P29320 983 aa6.34□□□□□ -1.39
SSR3-208ENST00000496050 PDE6CP51160 858 aa6.34□□□□□ -1.39
SSR3-208ENST00000496050 PGDP52209 483 aa6.34□□□□□ -1.39
SSR3-208ENST00000496050 BCAT1P54687 386 aa6.34□□□□□ -1.39
SSR3-208ENST00000496050 FAM189BP81408 668 aa6.34□□□□□ -1.39
SSR3-208ENST00000496050 POSTNQ15063 836 aa6.34□□□□□ -1.39
SSR3-208ENST00000496050 BEAN1Q3B7T3 259 aa6.34□□□□□ -1.39
SSR3-208ENST00000496050 ALFQ53S48 1182 aa6.34□□□□□ -1.39
SSR3-208ENST00000496050 VPS53Q5VIR6 699 aa6.34□□□□□ -1.39
SSR3-208ENST00000496050 KLHL17Q6TDP4 642 aa6.34□□□□□ -1.39
SSR3-208ENST00000496050 RASGRP3Q8IV61 690 aa6.34□□□□□ -1.39
SSR3-208ENST00000496050 FAM109AQ8N4B1 249 aa6.34□□□□□ -1.39
SSR3-208ENST00000496050 ZNF276Q8N554 614 aa6.34□□□□□ -1.39
SSR3-208ENST00000496050 CPEB3Q8NE35 698 aaKnown RBP6.34□□□□□ -1.39
SSR3-208ENST00000496050 PNISRQ8TF01 805 aaKnown RBP6.34□□□□□ -1.39
SSR3-208ENST00000496050 ATRIPQ8WXE1 791 aa6.34□□□□□ -1.39
SSR3-208ENST00000496050 RUBCNQ92622 972 aa6.34□□□□□ -1.39
SSR3-208ENST00000496050 GRAMD1AQ96CP6 724 aa6.34□□□□□ -1.39
SSR3-208ENST00000496050 CDK5RAP1Q96SZ6 601 aaKnown RBP6.34□□□□□ -1.39
SSR3-208ENST00000496050 KATNAL1Q9BW62 490 aa6.34□□□□□ -1.39
SSR3-208ENST00000496050 TPSD1Q9BZJ3 242 aa6.34□□□□□ -1.39
SSR3-208ENST00000496050 ZNF703Q9H7S9 590 aaPredicted RBP6.34□□□□□ -1.39
SSR3-208ENST00000496050 UNKLQ9H9P5 680 aaKnown RBP6.34□□□□□ -1.39
SSR3-208ENST00000496050 CASS4Q9NQ75 786 aa6.34□□□□□ -1.39
SSR3-208ENST00000496050 SERTAD3Q9UJW9 196 aa6.34□□□□□ -1.39
SSR3-208ENST00000496050 SSX2IPQ9Y2D8 614 aa6.34□□□□□ -1.39
SSR3-208ENST00000496050 GPR52Q9Y2T5 361 aa6.34□□□□□ -1.39
SSR3-208ENST00000496050 MARCH11A6NNE9 402 aa6.33□□□□□ -1.4
SSR3-208ENST00000496050 MUSKO15146 869 aa6.33□□□□□ -1.4
SSR3-208ENST00000496050 ZSCAN9O15535 394 aaPredicted RBP6.33□□□□□ -1.4
SSR3-208ENST00000496050 ASNA1O43681 348 aa6.33□□□□□ -1.4
SSR3-208ENST00000496050 PPFIA4O75335 1185 aa6.33□□□□□ -1.4
SSR3-208ENST00000496050 TNFRSF6BO95407 300 aa6.33□□□□□ -1.4
SSR3-208ENST00000496050 VIPP01282 170 aa6.33□□□□□ -1.4
SSR3-208ENST00000496050 CSF1RP07333 972 aa6.33□□□□□ -1.4
SSR3-208ENST00000496050 UQCRC1P31930 480 aa6.33□□□□□ -1.4
SSR3-208ENST00000496050 ATP1A4Q13733 1029 aa6.33□□□□□ -1.4
SSR3-208ENST00000496050 ATPAF1Q5TC12 328 aaPredicted RBP6.33□□□□□ -1.4
SSR3-208ENST00000496050 TANGO2Q6ICL3 276 aa6.33□□□□□ -1.4
SSR3-208ENST00000496050 C1orf210Q8IVY1 113 aa6.33□□□□□ -1.4
SSR3-208ENST00000496050 NRSN1Q8IZ57 195 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms