RNA–Protein interactions for RNA: ENST00000493957.5

UBA3-211, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 3

Gene UBA3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-211ENST00000493957 SLC9A1P19634 815 aa12.38□□□□□ -0.43
UBA3-211ENST00000493957 FCARP24071 287 aa12.38□□□□□ -0.43
UBA3-211ENST00000493957 GRIK1P39086 918 aa12.38□□□□□ -0.43
UBA3-211ENST00000493957 RPL10AP62906 217 aaKnown RBP12.38□□□□□ -0.43
UBA3-211ENST00000493957 NCAPHQ15003 741 aa12.38□□□□□ -0.43
UBA3-211ENST00000493957 MAN2A1Q16706 1144 aa12.38□□□□□ -0.43
UBA3-211ENST00000493957 ANO6Q4KMQ2 910 aa12.38□□□□□ -0.43
UBA3-211ENST00000493957 CDKAL1Q5VV42 579 aa12.38□□□□□ -0.43
UBA3-211ENST00000493957 PHLDB3Q6NSJ2 640 aa12.38□□□□□ -0.43
UBA3-211ENST00000493957 VSTM1Q6UX27 236 aa12.38□□□□□ -0.43
UBA3-211ENST00000493957 ITIH5Q86UX2 942 aa12.38□□□□□ -0.43
UBA3-211ENST00000493957 ZMIZ2Q8NF64 920 aa12.38□□□□□ -0.43
UBA3-211ENST00000493957 TNIP3Q96KP6 325 aa12.38□□□□□ -0.43
UBA3-211ENST00000493957 NT5C1BQ96P26 610 aa12.38□□□□□ -0.43
UBA3-211ENST00000493957 SMOQ99835 787 aa12.38□□□□□ -0.43
UBA3-211ENST00000493957 TUBGCP2Q9BSJ2 902 aa12.38□□□□□ -0.43
UBA3-211ENST00000493957 NT5C1AQ9BXI3 368 aa12.38□□□□□ -0.43
UBA3-211ENST00000493957 PLA2G2FQ9BZM2 168 aa12.38□□□□□ -0.43
UBA3-211ENST00000493957 HSD3B7Q9H2F3 369 aa12.38□□□□□ -0.43
UBA3-211ENST00000493957 KRT82Q9NSB4 513 aa12.38□□□□□ -0.43
UBA3-211ENST00000493957 FANCLQ9NW38 375 aa12.38□□□□□ -0.43
UBA3-211ENST00000493957 TAB2Q9NYJ8 693 aa12.38□□□□□ -0.43
UBA3-211ENST00000493957 AJAP1Q9UKB5 411 aaPredicted RBP12.38□□□□□ -0.43
UBA3-211ENST00000493957 NUMBLQ9Y6R0 609 aa12.38□□□□□ -0.43
UBA3-211ENST00000493957 MIA3Q5JRA6 1907 aa12.38□□□□□ -0.43
UBA3-211ENST00000493957 KMT2EQ8IZD2 1858 aa12.38□□□□□ -0.43
UBA3-211ENST00000493957 SYCE3A1L190 88 aa12.37□□□□□ -0.43
UBA3-211ENST00000493957 PI4K2BG5E9Z4 385 aa12.37□□□□□ -0.43
UBA3-211ENST00000493957 RNF225M0QZC1 329 aaPredicted RBP12.37□□□□□ -0.43
UBA3-211ENST00000493957 ZNF197O14709 1029 aa12.37□□□□□ -0.43
UBA3-211ENST00000493957 AP1G2O75843 785 aa12.37□□□□□ -0.43
UBA3-211ENST00000493957 F11P03951 625 aa12.37□□□□□ -0.43
UBA3-211ENST00000493957 CSH1P0DML2 217 aa12.37□□□□□ -0.43
UBA3-211ENST00000493957 CSH2P0DML3 217 aa12.37□□□□□ -0.43
UBA3-211ENST00000493957 PRKCSHP14314 528 aaPredicted RBP12.37□□□□□ -0.43
UBA3-211ENST00000493957 ACO1P21399 889 aaKnown RBP12.37□□□□□ -0.43
UBA3-211ENST00000493957 TCP11X2Q5H9J9 407 aa12.37□□□□□ -0.43
UBA3-211ENST00000493957 CT47A1Q5JQC4 288 aaPredicted RBP12.37□□□□□ -0.43
UBA3-211ENST00000493957 FAM78AQ5JUQ0 283 aa12.37□□□□□ -0.43
UBA3-211ENST00000493957 PPP1R26Q5T8A7 1209 aaPredicted RBP12.37□□□□□ -0.43
UBA3-211ENST00000493957 FAM114A1Q8IWE2 563 aa12.37□□□□□ -0.43
UBA3-211ENST00000493957 PPM1KQ8N3J5 372 aa12.37□□□□□ -0.43
UBA3-211ENST00000493957 AOPEPQ8N6M6 819 aa12.37□□□□□ -0.43
UBA3-211ENST00000493957 JAKMIP2Q96AA8 810 aa12.37□□□□□ -0.43
UBA3-211ENST00000493957 RSPRY1Q96DX4 576 aa12.37□□□□□ -0.43
UBA3-211ENST00000493957 ATXN3LQ9H3M9 355 aa12.37□□□□□ -0.43
UBA3-211ENST00000493957 SIX2Q9NPC8 291 aa12.37□□□□□ -0.43
UBA3-211ENST00000493957 C11orf16Q9NQ32 467 aa12.37□□□□□ -0.43
UBA3-211ENST00000493957 ZDBF2Q9HCK1 2354 aa12.36□□□□□ -0.43
UBA3-211ENST00000493957 MAP3K7CLP57077 242 aa12.36□□□□□ -0.43
UBA3-211ENST00000493957 ZXDAP98168 799 aa12.36□□□□□ -0.43
UBA3-211ENST00000493957 MYL5Q02045 173 aa12.36□□□□□ -0.43
UBA3-211ENST00000493957 IFRD2Q12894 506 aaPredicted RBP12.36□□□□□ -0.43
UBA3-211ENST00000493957 KRT31Q15323 416 aa12.36□□□□□ -0.43
UBA3-211ENST00000493957 TAF12Q16514 161 aa12.36□□□□□ -0.43
UBA3-211ENST00000493957 VWA3BQ502W6 1294 aa12.36□□□□□ -0.43
UBA3-211ENST00000493957 GPR158Q5T848 1215 aa12.36□□□□□ -0.43
UBA3-211ENST00000493957 TANGO2Q6ICL3 276 aa12.36□□□□□ -0.43
UBA3-211ENST00000493957 DPY19L2P1Q6NXN4 242 aa12.36□□□□□ -0.43
UBA3-211ENST00000493957 TRIM65Q6PJ69 517 aa12.36□□□□□ -0.43
UBA3-211ENST00000493957 GPRIN1Q7Z2K8 1008 aa12.36□□□□□ -0.43
UBA3-211ENST00000493957 SLC44A3Q8N4M1 653 aa12.36□□□□□ -0.43
UBA3-211ENST00000493957 LEMD2Q8NC56 503 aa12.36□□□□□ -0.43
UBA3-211ENST00000493957 CYFIP2Q96F07 1278 aa12.36□□□□□ -0.43
UBA3-211ENST00000493957 SMARCD1Q96GM5 515 aa12.36□□□□□ -0.43
UBA3-211ENST00000493957 TMEM176AQ96HP8 235 aa12.36□□□□□ -0.43
UBA3-211ENST00000493957 FAXDC2Q96IV6 333 aa12.36□□□□□ -0.43
UBA3-211ENST00000493957 SPATA17Q96L03 361 aa12.36□□□□□ -0.43
UBA3-211ENST00000493957 C8orf48Q96LL4 319 aa12.36□□□□□ -0.43
UBA3-211ENST00000493957 HEXIM2Q96MH2 286 aaKnown RBP12.36□□□□□ -0.43
UBA3-211ENST00000493957 ASB16Q96NS5 453 aa12.36□□□□□ -0.43
UBA3-211ENST00000493957 HNRNPABQ99729 332 aaKnown RBP12.36□□□□□ -0.43
UBA3-211ENST00000493957 ZSWIM1Q9BR11 485 aa12.36□□□□□ -0.43
UBA3-211ENST00000493957 SMG9Q9H0W8 520 aaKnown RBP12.36□□□□□ -0.43
UBA3-211ENST00000493957 NDST4Q9H3R1 872 aa12.36□□□□□ -0.43
UBA3-211ENST00000493957 SLITRK6Q9H5Y7 841 aa12.36□□□□□ -0.43
UBA3-211ENST00000493957 SORCS3Q9UPU3 1222 aa12.36□□□□□ -0.43
UBA3-211ENST00000493957 ZNF318Q5VUA4 2279 aa12.36□□□□□ -0.43
UBA3-211ENST00000493957 ATG2BQ96BY7 2078 aa12.35□□□□□ -0.43
UBA3-211ENST00000493957 HHLA1C9JL84 531 aa12.35□□□□□ -0.43
UBA3-211ENST00000493957 TNFRSF10BO14763 440 aa12.35□□□□□ -0.43
UBA3-211ENST00000493957 TRIM66O15016 1216 aa12.35□□□□□ -0.43
UBA3-211ENST00000493957 MICAL2O94851 1124 aa12.35□□□□□ -0.43
UBA3-211ENST00000493957 PRAMEF12O95522 483 aa12.35□□□□□ -0.43
UBA3-211ENST00000493957 TBXAS1P24557 533 aaPredicted RBP12.35□□□□□ -0.43
UBA3-211ENST00000493957 PON1P27169 355 aa12.35□□□□□ -0.43
UBA3-211ENST00000493957 ANXA13P27216 316 aa12.35□□□□□ -0.43
UBA3-211ENST00000493957 VIPR2P41587 438 aa12.35□□□□□ -0.43
UBA3-211ENST00000493957 KCNMA1Q12791 1236 aa12.35□□□□□ -0.43
UBA3-211ENST00000493957 CETN1Q12798 172 aa12.35□□□□□ -0.43
UBA3-211ENST00000493957 GRM2Q14416 872 aa12.35□□□□□ -0.43
UBA3-211ENST00000493957 TXNDC8Q6A555 127 aa12.35□□□□□ -0.43
UBA3-211ENST00000493957 TMEM270Q6UE05 265 aa12.35□□□□□ -0.43
UBA3-211ENST00000493957 GBP6Q6ZN66 633 aa12.35□□□□□ -0.43
UBA3-211ENST00000493957 CLEC20AQ6ZU45 233 aa12.35□□□□□ -0.43
UBA3-211ENST00000493957 DHX40Q8IX18 779 aaKnown RBP12.35□□□□□ -0.43
UBA3-211ENST00000493957 SCAMP5Q8TAC9 235 aa12.35□□□□□ -0.43
UBA3-211ENST00000493957 ZSCAN18Q8TBC5 510 aaPredicted RBP12.35□□□□□ -0.43
UBA3-211ENST00000493957 TFAP2BQ92481 460 aa12.35□□□□□ -0.43
UBA3-211ENST00000493957 TRMT2BQ96GJ1 504 aaKnown RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms