RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 RBBP8NLQ8NC74 664 aaPredicted RBP11.47□□□□□ -0.57
ATG4B-219ENST00000479941 SHKBP1Q8TBC3 707 aa11.47□□□□□ -0.57
ATG4B-219ENST00000479941 SHC3Q92529 594 aa11.47□□□□□ -0.57
ATG4B-219ENST00000479941 TCEAL4Q96EI5 215 aa11.47□□□□□ -0.57
ATG4B-219ENST00000479941 NECAB3Q96P71 396 aaPredicted RBP11.47□□□□□ -0.57
ATG4B-219ENST00000479941 KCNK16Q96T55 309 aa11.47□□□□□ -0.57
ATG4B-219ENST00000479941 SMOQ99835 787 aa11.47□□□□□ -0.57
ATG4B-219ENST00000479941 TTLL2Q9BWV7 592 aa11.47□□□□□ -0.57
ATG4B-219ENST00000479941 LSM14BQ9BX40 385 aaKnown RBP11.47□□□□□ -0.57
ATG4B-219ENST00000479941 DUSP16Q9BY84 665 aa11.47□□□□□ -0.57
ATG4B-219ENST00000479941 ATXN3LQ9H3M9 355 aa11.47□□□□□ -0.57
ATG4B-219ENST00000479941 TSPY26PQ9H489 355 aa11.47□□□□□ -0.57
ATG4B-219ENST00000479941 IL21Q9HBE4 155 aa11.47□□□□□ -0.57
ATG4B-219ENST00000479941 PNPLA8Q9NP80 782 aa11.47□□□□□ -0.57
ATG4B-219ENST00000479941 TMEM30AQ9NV96 361 aa11.47□□□□□ -0.57
ATG4B-219ENST00000479941 COMMD8Q9NX08 183 aa11.47□□□□□ -0.57
ATG4B-219ENST00000479941 HESX1Q9UBX0 185 aa11.47□□□□□ -0.57
ATG4B-219ENST00000479941 ZMYM5Q9UJ78 669 aa11.47□□□□□ -0.57
ATG4B-219ENST00000479941 DNAJC12Q9UKB3 198 aa11.47□□□□□ -0.57
ATG4B-219ENST00000479941 MAGED2Q9UNF1 606 aaPredicted RBP11.47□□□□□ -0.57
ATG4B-219ENST00000479941 NOTCH4Q99466 2003 aa11.47□□□□□ -0.57
ATG4B-219ENST00000479941 SOBPA7XYQ1 873 aa11.46□□□□□ -0.57
ATG4B-219ENST00000479941 RNF225M0QZC1 329 aaPredicted RBP11.46□□□□□ -0.57
ATG4B-219ENST00000479941 TNFRSF10BO14763 440 aa11.46□□□□□ -0.57
ATG4B-219ENST00000479941 MOSPD3O75425 235 aa11.46□□□□□ -0.57
ATG4B-219ENST00000479941 KRT5P13647 590 aa11.46□□□□□ -0.57
ATG4B-219ENST00000479941 UCHL3P15374 230 aa11.46□□□□□ -0.57
ATG4B-219ENST00000479941 CEBPBP17676 345 aa11.46□□□□□ -0.57
ATG4B-219ENST00000479941 PPP3CCP48454 512 aa11.46□□□□□ -0.57
ATG4B-219ENST00000479941 MAP3K7CLP57077 242 aa11.46□□□□□ -0.57
ATG4B-219ENST00000479941 ZNF445P59923 1031 aa11.46□□□□□ -0.57
ATG4B-219ENST00000479941 ARHGAP15Q53QZ3 475 aa11.46□□□□□ -0.57
ATG4B-219ENST00000479941 ANKRD52Q8NB46 1076 aa11.46□□□□□ -0.57
ATG4B-219ENST00000479941 ZMIZ2Q8NF64 920 aa11.46□□□□□ -0.57
ATG4B-219ENST00000479941 ING5Q8WYH8 240 aa11.46□□□□□ -0.57
ATG4B-219ENST00000479941 NXPE3Q969Y0 559 aa11.46□□□□□ -0.57
ATG4B-219ENST00000479941 MCRS1Q96EZ8 462 aa11.46□□□□□ -0.57
ATG4B-219ENST00000479941 ERGIC2Q96RQ1 377 aa11.46□□□□□ -0.57
ATG4B-219ENST00000479941 COL25A1Q9BXS0 654 aaPredicted RBP11.46□□□□□ -0.57
ATG4B-219ENST00000479941 UBXN6Q9BZV1 441 aa11.46□□□□□ -0.57
ATG4B-219ENST00000479941 CD320Q9NPF0 282 aa11.46□□□□□ -0.57
ATG4B-219ENST00000479941 RTN4Q9NQC3 1192 aaKnown RBP11.46□□□□□ -0.57
ATG4B-219ENST00000479941 IGSF9Q9P2J2 1179 aa11.46□□□□□ -0.57
ATG4B-219ENST00000479941 TSPAN16Q9UKR8 245 aa11.46□□□□□ -0.57
ATG4B-219ENST00000479941 A0A1B0GTH6 734 aa11.45□□□□□ -0.58
ATG4B-219ENST00000479941 O00370 1275 aa11.45□□□□□ -0.58
ATG4B-219ENST00000479941 BEST1O76090 585 aa11.45□□□□□ -0.58
ATG4B-219ENST00000479941 SERPINC1P01008 464 aa11.45□□□□□ -0.58
ATG4B-219ENST00000479941 F11P03951 625 aa11.45□□□□□ -0.58
ATG4B-219ENST00000479941 GJA1P17302 382 aa11.45□□□□□ -0.58
ATG4B-219ENST00000479941 DDX6P26196 483 aaKnown RBP eCLIP11.45□□□□□ -0.58
ATG4B-219ENST00000479941 YWHAQP27348 245 aa11.45□□□□□ -0.58
ATG4B-219ENST00000479941 USP8P40818 1118 aa11.45□□□□□ -0.58
ATG4B-219ENST00000479941 SLC5A3P53794 718 aa11.45□□□□□ -0.58
ATG4B-219ENST00000479941 BCAT1P54687 386 aa11.45□□□□□ -0.58
ATG4B-219ENST00000479941 USP46P62068 366 aa11.45□□□□□ -0.58
ATG4B-219ENST00000479941 SYCP1Q15431 976 aa11.45□□□□□ -0.58
ATG4B-219ENST00000479941 TEAD2Q15562 447 aa11.45□□□□□ -0.58
ATG4B-219ENST00000479941 CNGA2Q16280 664 aa11.45□□□□□ -0.58
ATG4B-219ENST00000479941 GOLGA7BQ2TAP0 167 aa11.45□□□□□ -0.58
ATG4B-219ENST00000479941 LCLAT1Q6UWP7 414 aa11.45□□□□□ -0.58
ATG4B-219ENST00000479941 MTSS1LQ765P7 747 aa11.45□□□□□ -0.58
ATG4B-219ENST00000479941 RNF135Q8IUD6 432 aa11.45□□□□□ -0.58
ATG4B-219ENST00000479941 STKLD1Q8NE28 680 aa11.45□□□□□ -0.58
ATG4B-219ENST00000479941 PDZD8Q8NEN9 1154 aa11.45□□□□□ -0.58
ATG4B-219ENST00000479941 NEK11Q8NG66 645 aa11.45□□□□□ -0.58
ATG4B-219ENST00000479941 OVCA2Q8WZ82 227 aa11.45□□□□□ -0.58
ATG4B-219ENST00000479941 MRPS31Q92665 395 aaKnown RBP11.45□□□□□ -0.58
ATG4B-219ENST00000479941 PCMTD1Q96MG8 357 aaPredicted RBP11.45□□□□□ -0.58
ATG4B-219ENST00000479941 SLITRK1Q96PX8 696 aa11.45□□□□□ -0.58
ATG4B-219ENST00000479941 NAA15Q9BXJ9 866 aaKnown RBP11.45□□□□□ -0.58
ATG4B-219ENST00000479941 STK33Q9BYT3 514 aa11.45□□□□□ -0.58
ATG4B-219ENST00000479941 FBXO44Q9H4M3 255 aa11.45□□□□□ -0.58
ATG4B-219ENST00000479941 SLITRK6Q9H5Y7 841 aa11.45□□□□□ -0.58
ATG4B-219ENST00000479941 KCNK12Q9HB15 430 aa11.45□□□□□ -0.58
ATG4B-219ENST00000479941 IL37Q9NZH6 218 aa11.45□□□□□ -0.58
ATG4B-219ENST00000479941 TRPM5Q9NZQ8 1165 aa11.45□□□□□ -0.58
ATG4B-219ENST00000479941 LIMD1Q9UGP4 676 aa11.45□□□□□ -0.58
ATG4B-219ENST00000479941 SIK3Q9Y2K2 1263 aa11.45□□□□□ -0.58
ATG4B-219ENST00000479941 FHOD1Q9Y613 1164 aa11.45□□□□□ -0.58
ATG4B-219ENST00000479941 DOCK8Q8NF50 2099 aa11.45□□□□□ -0.58
ATG4B-219ENST00000479941 FAM92AA1XBS5 289 aa11.44□□□□□ -0.58
ATG4B-219ENST00000479941 HHLA1C9JL84 531 aa11.44□□□□□ -0.58
ATG4B-219ENST00000479941 ANHXE9PGG2 379 aa11.44□□□□□ -0.58
ATG4B-219ENST00000479941 FOXN3O00409 490 aaPredicted RBP11.44□□□□□ -0.58
ATG4B-219ENST00000479941 NRG2O14511 850 aaPredicted RBP11.44□□□□□ -0.58
ATG4B-219ENST00000479941 MED7O43513 233 aa11.44□□□□□ -0.58
ATG4B-219ENST00000479941 SETSIPP0DME0 302 aa11.44□□□□□ -0.58
ATG4B-219ENST00000479941 WEE1P30291 646 aa11.44□□□□□ -0.58
ATG4B-219ENST00000479941 GNA15P30679 374 aa11.44□□□□□ -0.58
ATG4B-219ENST00000479941 KLK7P49862 253 aa11.44□□□□□ -0.58
ATG4B-219ENST00000479941 BPIFB4P59827 614 aa11.44□□□□□ -0.58
ATG4B-219ENST00000479941 PTK2Q05397 1052 aa11.44□□□□□ -0.58
ATG4B-219ENST00000479941 BST2Q10589 180 aaKnown RBP11.44□□□□□ -0.58
ATG4B-219ENST00000479941 IFRD2Q12894 506 aaPredicted RBP11.44□□□□□ -0.58
ATG4B-219ENST00000479941 TAF10Q12962 218 aa11.44□□□□□ -0.58
ATG4B-219ENST00000479941 RAPGEF1Q13905 1077 aa11.44□□□□□ -0.58
ATG4B-219ENST00000479941 DRAP1Q14919 205 aaPredicted RBP11.44□□□□□ -0.58
ATG4B-219ENST00000479941 MEA1Q16626 185 aa11.44□□□□□ -0.58
ATG4B-219ENST00000479941 GPR158Q5T848 1215 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms