RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 REM2Q8IYK8 340 aaPredicted RBP6.55□□□□□ -1.36
CLK1-210ENST00000473565 CRYBG2Q8N1P7 616 aa6.55□□□□□ -1.36
CLK1-210ENST00000473565 GLIS1Q8NBF1 620 aa6.55□□□□□ -1.36
CLK1-210ENST00000473565 OR2W6PQ8NHA6 318 aa6.55□□□□□ -1.36
CLK1-210ENST00000473565 EXD1Q8NHP7 514 aa6.55□□□□□ -1.36
CLK1-210ENST00000473565 DEFB118Q96PH6 123 aa6.55□□□□□ -1.36
CLK1-210ENST00000473565 UBXN6Q9BZV1 441 aa6.55□□□□□ -1.36
CLK1-210ENST00000473565 DCLK3Q9C098 648 aa6.55□□□□□ -1.36
CLK1-210ENST00000473565 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.55□□□□□ -1.36
CLK1-210ENST00000473565 NGRNQ9NPE2 291 aaKnown RBP6.55□□□□□ -1.36
CLK1-210ENST00000473565 C2CD4BA6NLJ0 364 aa6.54□□□□□ -1.36
CLK1-210ENST00000473565 SYF2O95926 243 aaKnown RBP6.54□□□□□ -1.36
CLK1-210ENST00000473565 ETS1P14921 441 aa6.54□□□□□ -1.36
CLK1-210ENST00000473565 PTPN1P18031 435 aaKnown RBP6.54□□□□□ -1.36
CLK1-210ENST00000473565 GPD1P21695 349 aa6.54□□□□□ -1.36
CLK1-210ENST00000473565 GATMP50440 423 aa6.54□□□□□ -1.36
CLK1-210ENST00000473565 KRT17Q04695 432 aa6.54□□□□□ -1.36
CLK1-210ENST00000473565 PPP1R7Q15435 360 aa6.54□□□□□ -1.36
CLK1-210ENST00000473565 CYP1B1Q16678 543 aa6.54□□□□□ -1.36
CLK1-210ENST00000473565 ODF2Q5BJF6 829 aa6.54□□□□□ -1.36
CLK1-210ENST00000473565 ARHGAP17Q68EM7 881 aa6.54□□□□□ -1.36
CLK1-210ENST00000473565 DUPD1Q68J44 220 aa6.54□□□□□ -1.36
CLK1-210ENST00000473565 EMBQ6PCB8 327 aa6.54□□□□□ -1.36
CLK1-210ENST00000473565 ZDHHC24Q6UX98 284 aa6.54□□□□□ -1.36
CLK1-210ENST00000473565 MRPL10Q7Z7H8 261 aaKnown RBP6.54□□□□□ -1.36
CLK1-210ENST00000473565 PIGZQ86VD9 579 aa6.54□□□□□ -1.36
CLK1-210ENST00000473565 ZNF280BQ86YH2 543 aa6.54□□□□□ -1.36
CLK1-210ENST00000473565 HACE1Q8IYU2 909 aa6.54□□□□□ -1.36
CLK1-210ENST00000473565 TAB3Q8N5C8 712 aaPredicted RBP6.54□□□□□ -1.36
CLK1-210ENST00000473565 SLAIN1Q8ND83 568 aa6.54□□□□□ -1.36
CLK1-210ENST00000473565 FBXO25Q8TCJ0 367 aa6.54□□□□□ -1.36
CLK1-210ENST00000473565 LRRN4Q8WUT4 740 aa6.54□□□□□ -1.36
CLK1-210ENST00000473565 PWWP2AQ96N64 755 aa6.54□□□□□ -1.36
CLK1-210ENST00000473565 TMEM209Q96SK2 561 aa6.54□□□□□ -1.36
CLK1-210ENST00000473565 KCNK16Q96T55 309 aa6.54□□□□□ -1.36
CLK1-210ENST00000473565 MED10Q9BTT4 135 aa6.54□□□□□ -1.36
CLK1-210ENST00000473565 SLC4A5Q9BY07 1137 aa6.54□□□□□ -1.36
CLK1-210ENST00000473565 LRRC4CQ9HCJ2 640 aa6.54□□□□□ -1.36
CLK1-210ENST00000473565 DNAJC17Q9NVM6 304 aaKnown RBP6.54□□□□□ -1.36
CLK1-210ENST00000473565 HCSTQ9UBK5 93 aa6.54□□□□□ -1.36
CLK1-210ENST00000473565 KIAA1257Q9ULG3 409 aa6.54□□□□□ -1.36
CLK1-210ENST00000473565 FAN1Q9Y2M0 1017 aa6.54□□□□□ -1.36
CLK1-210ENST00000473565 GIT1Q9Y2X7 761 aa6.54□□□□□ -1.36
CLK1-210ENST00000473565 KIAA0100Q14667 2235 aaKnown RBP6.54□□□□□ -1.36
CLK1-210ENST00000473565 TTC3P53804 2025 aa6.54□□□□□ -1.36
CLK1-210ENST00000473565 SCN5AQ14524 2016 aa6.54□□□□□ -1.36
CLK1-210ENST00000473565 SYNJ2BP-COX16A0A087WUM0 186 aa6.54□□□□□ -1.36
CLK1-210ENST00000473565 GOLGA6BA6NDN3 693 aa6.54□□□□□ -1.36
CLK1-210ENST00000473565 MAP3K6O95382 1288 aa6.54□□□□□ -1.36
CLK1-210ENST00000473565 ZSCAN5DPP0CG00 497 aa6.54□□□□□ -1.36
CLK1-210ENST00000473565 HSPA6P17066 643 aa6.54□□□□□ -1.36
CLK1-210ENST00000473565 CDKN2BP42772 138 aa6.54□□□□□ -1.36
CLK1-210ENST00000473565 BCAR1P56945 870 aa6.54□□□□□ -1.36
CLK1-210ENST00000473565 PITX1P78337 314 aaPredicted RBP6.54□□□□□ -1.36
CLK1-210ENST00000473565 TAP1Q03518 808 aa6.54□□□□□ -1.36
CLK1-210ENST00000473565 ADIGQ0VDE8 80 aa6.54□□□□□ -1.36
CLK1-210ENST00000473565 BST2Q10589 180 aaKnown RBP6.54□□□□□ -1.36
CLK1-210ENST00000473565 UAP1Q16222 522 aaPredicted RBP6.54□□□□□ -1.36
CLK1-210ENST00000473565 UPP1Q16831 310 aa6.54□□□□□ -1.36
CLK1-210ENST00000473565 CCDC14Q49A88 953 aa6.54□□□□□ -1.36
CLK1-210ENST00000473565 LIMS2Q7Z4I7 341 aa6.54□□□□□ -1.36
CLK1-210ENST00000473565 ECHDC2Q86YB7 292 aa6.54□□□□□ -1.36
CLK1-210ENST00000473565 TTC39CQ8N584 583 aa6.54□□□□□ -1.36
CLK1-210ENST00000473565 TOP6BLQ8N6T0 577 aa6.54□□□□□ -1.36
CLK1-210ENST00000473565 NIPA2Q8N8Q9 360 aa6.54□□□□□ -1.36
CLK1-210ENST00000473565 ANKRD52Q8NB46 1076 aa6.54□□□□□ -1.36
CLK1-210ENST00000473565 CAVIN3Q969G5 261 aa6.54□□□□□ -1.36
CLK1-210ENST00000473565 ZIM3Q96PE6 472 aa6.54□□□□□ -1.36
CLK1-210ENST00000473565 PLVAPQ9BX97 442 aa6.54□□□□□ -1.36
CLK1-210ENST00000473565 KRT82Q9NSB4 513 aa6.54□□□□□ -1.36
CLK1-210ENST00000473565 SLC38A7Q9NVC3 462 aa6.54□□□□□ -1.36
CLK1-210ENST00000473565 GRHL1Q9NZI5 618 aa6.54□□□□□ -1.36
CLK1-210ENST00000473565 COX16Q9P0S2 106 aa6.54□□□□□ -1.36
CLK1-210ENST00000473565 WDR35Q9P2L0 1181 aa6.54□□□□□ -1.36
CLK1-210ENST00000473565 PCYOX1Q9UHG3 505 aa6.54□□□□□ -1.36
CLK1-210ENST00000473565 DNPEPQ9ULA0 475 aa6.54□□□□□ -1.36
CLK1-210ENST00000473565 USP18Q9UMW8 372 aa6.54□□□□□ -1.36
CLK1-210ENST00000473565 hCG_1818297A0A087WSY0 165 aa6.54□□□□□ -1.36
CLK1-210ENST00000473565 MOXD2PA6NHM9 499 aa6.54□□□□□ -1.36
CLK1-210ENST00000473565 C3orf70A6NLC5 250 aaPredicted RBP6.54□□□□□ -1.36
CLK1-210ENST00000473565 PQBP1O60828 265 aaKnown RBP6.54□□□□□ -1.36
CLK1-210ENST00000473565 CABYRO75952 493 aa6.54□□□□□ -1.36
CLK1-210ENST00000473565 ECEL1O95672 775 aa6.54□□□□□ -1.36
CLK1-210ENST00000473565 KRT14P02533 472 aa6.54□□□□□ -1.36
CLK1-210ENST00000473565 WARSP23381 471 aaKnown RBP6.54□□□□□ -1.36
CLK1-210ENST00000473565 ZNF143P52747 638 aaPredicted RBP6.54□□□□□ -1.36
CLK1-210ENST00000473565 BCAT1P54687 386 aa6.54□□□□□ -1.36
CLK1-210ENST00000473565 NRLP54845 237 aa6.54□□□□□ -1.36
CLK1-210ENST00000473565 MAP3K7CLP57077 242 aa6.54□□□□□ -1.36
CLK1-210ENST00000473565 SLC6A3Q01959 620 aa6.54□□□□□ -1.36
CLK1-210ENST00000473565 DHX34Q14147 1143 aaKnown RBP6.54□□□□□ -1.36
CLK1-210ENST00000473565 CA9Q16790 459 aa6.54□□□□□ -1.36
CLK1-210ENST00000473565 TCTN1Q2MV58 587 aa6.54□□□□□ -1.36
CLK1-210ENST00000473565 ZC3H12AQ5D1E8 599 aaKnown RBP6.54□□□□□ -1.36
CLK1-210ENST00000473565 CLLU1OSQ5K130 101 aa6.54□□□□□ -1.36
CLK1-210ENST00000473565 CD300LGQ6UXG3 332 aa6.54□□□□□ -1.36
CLK1-210ENST00000473565 CYP4V2Q6ZWL3 525 aaPredicted RBP6.54□□□□□ -1.36
CLK1-210ENST00000473565 TMEM110Q86TL2 294 aa6.54□□□□□ -1.36
CLK1-210ENST00000473565 FAM172AQ8WUF8 416 aa6.54□□□□□ -1.36
CLK1-210ENST00000473565 PIK3R5Q8WYR1 880 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 190.4 ms