RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 UROC1Q96N76 676 aa7.2□□□□□ -1.26
HDAC3-206ENST00000471968 ANO3Q9BYT9 981 aa7.2□□□□□ -1.26
HDAC3-206ENST00000471968 CD248Q9HCU0 757 aa7.2□□□□□ -1.26
HDAC3-206ENST00000471968 TUBD1Q9UJT1 453 aa7.2□□□□□ -1.26
HDAC3-206ENST00000471968 PHTF1Q9UMS5 762 aa7.2□□□□□ -1.26
HDAC3-206ENST00000471968 NUB1Q9Y5A7 615 aa7.2□□□□□ -1.26
HDAC3-206ENST00000471968 JMJD1CQ15652 2540 aa7.19□□□□□ -1.26
HDAC3-206ENST00000471968 IGLV3-22A0A075B6J6 115 aa7.19□□□□□ -1.26
HDAC3-206ENST00000471968 A0A0A0MRY4 1105 aa7.19□□□□□ -1.26
HDAC3-206ENST00000471968 TRAK2O60296 914 aa7.19□□□□□ -1.26
HDAC3-206ENST00000471968 OPA1O60313 960 aa7.19□□□□□ -1.26
HDAC3-206ENST00000471968 NOBOXO60393 691 aa7.19□□□□□ -1.26
HDAC3-206ENST00000471968 TNFSF15O95150 251 aa7.19□□□□□ -1.26
HDAC3-206ENST00000471968 STBD1O95210 358 aa7.19□□□□□ -1.26
HDAC3-206ENST00000471968 CYP17A1P05093 508 aa7.19□□□□□ -1.26
HDAC3-206ENST00000471968 THEGLP0DJG4 465 aa7.19□□□□□ -1.26
HDAC3-206ENST00000471968 WT1P19544 449 aaPredicted RBP7.19□□□□□ -1.26
HDAC3-206ENST00000471968 ATP2B1P20020 1258 aa7.19□□□□□ -1.26
HDAC3-206ENST00000471968 GRIN1Q05586 938 aa7.19□□□□□ -1.26
HDAC3-206ENST00000471968 SMTNL2Q2TAL5 461 aa7.19□□□□□ -1.26
HDAC3-206ENST00000471968 PADI6Q6TGC4 694 aa7.19□□□□□ -1.26
HDAC3-206ENST00000471968 CLEC14AQ86T13 490 aa7.19□□□□□ -1.26
HDAC3-206ENST00000471968 VASH2Q86V25 355 aa7.19□□□□□ -1.26
HDAC3-206ENST00000471968 MON1AQ86VX9 555 aa7.19□□□□□ -1.26
HDAC3-206ENST00000471968 CHPFQ8IZ52 775 aa7.19□□□□□ -1.26
HDAC3-206ENST00000471968 SH3RF2Q8TEC5 729 aa7.19□□□□□ -1.26
HDAC3-206ENST00000471968 GIPC2Q8TF65 315 aa7.19□□□□□ -1.26
HDAC3-206ENST00000471968 MRPS31Q92665 395 aaKnown RBP7.19□□□□□ -1.26
HDAC3-206ENST00000471968 ATXN7L3BQ96GX2 97 aa7.19□□□□□ -1.26
HDAC3-206ENST00000471968 ACOX2Q99424 681 aa7.19□□□□□ -1.26
HDAC3-206ENST00000471968 SEPT5Q99719 369 aaPredicted RBP7.19□□□□□ -1.26
HDAC3-206ENST00000471968 OSBPL2Q9H1P3 480 aa7.19□□□□□ -1.26
HDAC3-206ENST00000471968 TRPC7Q9HCX4 862 aa7.19□□□□□ -1.26
HDAC3-206ENST00000471968 USP36Q9P275 1121 aaKnown RBP7.19□□□□□ -1.26
HDAC3-206ENST00000471968 PCDHGA8Q9Y5G5 932 aa7.19□□□□□ -1.26
HDAC3-206ENST00000471968 MYO18AQ92614 2054 aaKnown RBP7.18□□□□□ -1.26
HDAC3-206ENST00000471968 A0A1B0GUA9 196 aa7.18□□□□□ -1.26
HDAC3-206ENST00000471968 MTMR11A4FU01 709 aa7.18□□□□□ -1.26
HDAC3-206ENST00000471968 PODXLO00592 558 aa7.18□□□□□ -1.26
HDAC3-206ENST00000471968 WIPF1O43516 503 aa7.18□□□□□ -1.26
HDAC3-206ENST00000471968 LDLRP01130 860 aa7.18□□□□□ -1.26
HDAC3-206ENST00000471968 F11P03951 625 aa7.18□□□□□ -1.26
HDAC3-206ENST00000471968 CKMP06732 381 aa7.18□□□□□ -1.26
HDAC3-206ENST00000471968 RARGP13631 454 aa7.18□□□□□ -1.26
HDAC3-206ENST00000471968 ATF6P18850 670 aa7.18□□□□□ -1.26
HDAC3-206ENST00000471968 EPHA8P29322 1005 aaPredicted RBP7.18□□□□□ -1.26
HDAC3-206ENST00000471968 EIF2DP41214 584 aaKnown RBP7.18□□□□□ -1.26
HDAC3-206ENST00000471968 NT5C2P49902 561 aa7.18□□□□□ -1.26
HDAC3-206ENST00000471968 TPMTP51580 245 aa7.18□□□□□ -1.26
HDAC3-206ENST00000471968 NLRP12P59046 1061 aa7.18□□□□□ -1.26
HDAC3-206ENST00000471968 PTENP60484 403 aa7.18□□□□□ -1.26
HDAC3-206ENST00000471968 DAB2P98082 770 aa7.18□□□□□ -1.26
HDAC3-206ENST00000471968 MBTD1Q05BQ5 628 aa7.18□□□□□ -1.26
HDAC3-206ENST00000471968 KLRB1Q12918 225 aa7.18□□□□□ -1.26
HDAC3-206ENST00000471968 SEC23AQ15436 765 aa7.18□□□□□ -1.26
HDAC3-206ENST00000471968 ISXQ2M1V0 245 aa7.18□□□□□ -1.26
HDAC3-206ENST00000471968 EIF2S3LQ2VIR3 472 aaKnown RBP7.18□□□□□ -1.26
HDAC3-206ENST00000471968 MANEAQ5SRI9 462 aa7.18□□□□□ -1.26
HDAC3-206ENST00000471968 C10orf76Q5T2E6 689 aa7.18□□□□□ -1.26
HDAC3-206ENST00000471968 EGFLAMQ63HQ2 1017 aa7.18□□□□□ -1.26
HDAC3-206ENST00000471968 SDE2Q6IQ49 451 aa7.18□□□□□ -1.26
HDAC3-206ENST00000471968 C14orf80Q86SX3 495 aa7.18□□□□□ -1.26
HDAC3-206ENST00000471968 FERMT3Q86UX7 667 aa7.18□□□□□ -1.26
HDAC3-206ENST00000471968 APPL2Q8NEU8 664 aa7.18□□□□□ -1.26
HDAC3-206ENST00000471968 KCNV2Q8TDN2 545 aa7.18□□□□□ -1.26
HDAC3-206ENST00000471968 DDX12PQ92771 950 aa7.18□□□□□ -1.26
HDAC3-206ENST00000471968 TCTN2Q96GX1 697 aa7.18□□□□□ -1.26
HDAC3-206ENST00000471968 PPP1R10Q96QC0 940 aaKnown RBP7.18□□□□□ -1.26
HDAC3-206ENST00000471968 CYP2S1Q96SQ9 504 aa7.18□□□□□ -1.26
HDAC3-206ENST00000471968 C6orf106Q9H6K1 298 aaPredicted RBP7.18□□□□□ -1.26
HDAC3-206ENST00000471968 OSGEPQ9NPF4 335 aa7.18□□□□□ -1.26
HDAC3-206ENST00000471968 ITM2CQ9NQX7 267 aa7.18□□□□□ -1.26
HDAC3-206ENST00000471968 TJP2Q9UDY2 1190 aa7.18□□□□□ -1.26
HDAC3-206ENST00000471968 ERRFI1Q9UJM3 462 aaPredicted RBP7.18□□□□□ -1.26
HDAC3-206ENST00000471968 HCN2Q9UL51 889 aa7.18□□□□□ -1.26
HDAC3-206ENST00000471968 ENTPD4Q9Y227 616 aa7.18□□□□□ -1.26
HDAC3-206ENST00000471968 GDAQ9Y2T3 454 aa7.18□□□□□ -1.26
HDAC3-206ENST00000471968 STARD13Q9Y3M8 1113 aa7.18□□□□□ -1.26
HDAC3-206ENST00000471968 ESPL1Q14674 2120 aa7.18□□□□□ -1.26
HDAC3-206ENST00000471968 PRRC2CQ9Y520 2896 aaKnown RBP7.18□□□□□ -1.26
HDAC3-206ENST00000471968 ZNF638Q14966 1978 aaKnown RBP7.17□□□□□ -1.26
HDAC3-206ENST00000471968 DCHS2Q6V1P9 2916 aa7.17□□□□□ -1.26
HDAC3-206ENST00000471968 hCG_1642624A0A1W2PR95 340 aa7.17□□□□□ -1.26
HDAC3-206ENST00000471968 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.17□□□□□ -1.26
HDAC3-206ENST00000471968 HMMRO75330 724 aa7.17□□□□□ -1.26
HDAC3-206ENST00000471968 CENPBP07199 599 aaPredicted RBP7.17□□□□□ -1.26
HDAC3-206ENST00000471968 OXTRP30559 389 aa7.17□□□□□ -1.26
HDAC3-206ENST00000471968 MCM4P33991 863 aa7.17□□□□□ -1.26
HDAC3-206ENST00000471968 NPEPPSP55786 919 aa7.17□□□□□ -1.26
HDAC3-206ENST00000471968 YWHAHQ04917 246 aaPredicted RBP7.17□□□□□ -1.26
HDAC3-206ENST00000471968 SOX4Q06945 474 aaPredicted RBP7.17□□□□□ -1.26
HDAC3-206ENST00000471968 BNIP3Q12983 259 aa7.17□□□□□ -1.26
HDAC3-206ENST00000471968 GPR17Q13304 367 aa7.17□□□□□ -1.26
HDAC3-206ENST00000471968 ORC1Q13415 861 aa7.17□□□□□ -1.26
HDAC3-206ENST00000471968 DHCR24Q15392 516 aa7.17□□□□□ -1.26
HDAC3-206ENST00000471968 MGAT5BQ3V5L5 792 aa7.17□□□□□ -1.26
HDAC3-206ENST00000471968 ZC2HC1CQ53FD0 456 aaPredicted RBP7.17□□□□□ -1.26
HDAC3-206ENST00000471968 ANO5Q75V66 913 aa7.17□□□□□ -1.26
HDAC3-206ENST00000471968 CXXC5Q7LFL8 322 aaKnown RBP7.17□□□□□ -1.26
HDAC3-206ENST00000471968 FAM124AQ86V42 546 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms