RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 RAB27BO00194 218 aa2.3□□□□□ -2.04
NUCKS1-202ENST00000464938 TOR1BO14657 336 aa2.3□□□□□ -2.04
NUCKS1-202ENST00000464938 NPC1O15118 1278 aa2.3□□□□□ -2.04
NUCKS1-202ENST00000464938 TCEA3O75764 348 aa2.3□□□□□ -2.04
NUCKS1-202ENST00000464938 RASSF9O75901 435 aa2.3□□□□□ -2.04
NUCKS1-202ENST00000464938 TPH1P17752 444 aa2.3□□□□□ -2.04
NUCKS1-202ENST00000464938 PDIA3P30101 505 aaKnown RBP2.3□□□□□ -2.04
NUCKS1-202ENST00000464938 CD6P30203 668 aa2.3□□□□□ -2.04
NUCKS1-202ENST00000464938 PTGS2P35354 604 aa2.3□□□□□ -2.04
NUCKS1-202ENST00000464938 ZEB1P37275 1124 aaPredicted RBP2.3□□□□□ -2.04
NUCKS1-202ENST00000464938 ALDH9A1P49189 494 aa2.3□□□□□ -2.04
NUCKS1-202ENST00000464938 ATXN1P54253 815 aaKnown RBP2.3□□□□□ -2.04
NUCKS1-202ENST00000464938 BCAT1P54687 386 aa2.3□□□□□ -2.04
NUCKS1-202ENST00000464938 NXPH1P58417 271 aa2.3□□□□□ -2.04
NUCKS1-202ENST00000464938 BLOC1S1P78537 153 aa2.3□□□□□ -2.04
NUCKS1-202ENST00000464938 SP2Q02086 613 aa2.3□□□□□ -2.04
NUCKS1-202ENST00000464938 GUCY1B3Q02153 619 aa2.3□□□□□ -2.04
NUCKS1-202ENST00000464938 TNFAIP2Q03169 654 aa2.3□□□□□ -2.04
NUCKS1-202ENST00000464938 TAP1Q03518 808 aa2.3□□□□□ -2.04
NUCKS1-202ENST00000464938 GALNT1Q10472 559 aaPredicted RBP2.3□□□□□ -2.04
NUCKS1-202ENST00000464938 FOXO1Q12778 655 aa2.3□□□□□ -2.04
NUCKS1-202ENST00000464938 CHAF1AQ13111 956 aaPredicted RBP2.3□□□□□ -2.04
NUCKS1-202ENST00000464938 E2F2Q14209 437 aa2.3□□□□□ -2.04
NUCKS1-202ENST00000464938 PTK2BQ14289 1009 aa2.3□□□□□ -2.04
NUCKS1-202ENST00000464938 RAB30Q15771 203 aa2.3□□□□□ -2.04
NUCKS1-202ENST00000464938 MAPKAPK3Q16644 382 aa2.3□□□□□ -2.04
NUCKS1-202ENST00000464938 TIGD2Q4W5G0 525 aa2.3□□□□□ -2.04
NUCKS1-202ENST00000464938 IGFL4Q6B9Z1 124 aa2.3□□□□□ -2.04
NUCKS1-202ENST00000464938 LAYNQ6UX15 382 aa2.3□□□□□ -2.04
NUCKS1-202ENST00000464938 SYTL1Q8IYJ3 562 aa2.3□□□□□ -2.04
NUCKS1-202ENST00000464938 ULK2Q8IYT8 1036 aa2.3□□□□□ -2.04
NUCKS1-202ENST00000464938 ABRAQ8N0Z2 381 aa2.3□□□□□ -2.04
NUCKS1-202ENST00000464938 NKAPQ8N5F7 415 aaKnown RBP2.3□□□□□ -2.04
NUCKS1-202ENST00000464938 SLC30A5Q8TAD4 765 aa2.3□□□□□ -2.04
NUCKS1-202ENST00000464938 SSH3Q8TE77 659 aa2.3□□□□□ -2.04
NUCKS1-202ENST00000464938 SH3RF3Q8TEJ3 882 aaPredicted RBP2.3□□□□□ -2.04
NUCKS1-202ENST00000464938 POF1BQ8WVV4 589 aa2.3□□□□□ -2.04
NUCKS1-202ENST00000464938 ZNF566Q969W8 418 aa2.3□□□□□ -2.04
NUCKS1-202ENST00000464938 TMEM125Q96AQ2 219 aa2.3□□□□□ -2.04
NUCKS1-202ENST00000464938 FAM136AQ96C01 138 aa2.3□□□□□ -2.04
NUCKS1-202ENST00000464938 EID2BQ96D98 161 aa2.3□□□□□ -2.04
NUCKS1-202ENST00000464938 C18orf8Q96DM3 657 aa2.3□□□□□ -2.04
NUCKS1-202ENST00000464938 RSPRY1Q96DX4 576 aa2.3□□□□□ -2.04
NUCKS1-202ENST00000464938 RNF31Q96EP0 1072 aa2.3□□□□□ -2.04
NUCKS1-202ENST00000464938 SNX27Q96L92 541 aa2.3□□□□□ -2.04
NUCKS1-202ENST00000464938 COQ10AQ96MF6 247 aa2.3□□□□□ -2.04
NUCKS1-202ENST00000464938 PLEKHG4BQ96PX9 1271 aa2.3□□□□□ -2.04
NUCKS1-202ENST00000464938 MLST8Q9BVC4 326 aa2.3□□□□□ -2.04
NUCKS1-202ENST00000464938 MAGEB5Q9BZ81 275 aa2.3□□□□□ -2.04
NUCKS1-202ENST00000464938 WDR11Q9BZH6 1224 aa2.3□□□□□ -2.04
NUCKS1-202ENST00000464938 NRDE2Q9H7Z3 1164 aa2.3□□□□□ -2.04
NUCKS1-202ENST00000464938 ZBTB26Q9HCK0 441 aa2.3□□□□□ -2.04
NUCKS1-202ENST00000464938 SLC2A4RGQ9NR83 387 aa2.3□□□□□ -2.04
NUCKS1-202ENST00000464938 ZSCAN32Q9NX65 697 aa2.3□□□□□ -2.04
NUCKS1-202ENST00000464938 KCTD5Q9NXV2 234 aa2.3□□□□□ -2.04
NUCKS1-202ENST00000464938 IGSF9Q9P2J2 1179 aa2.3□□□□□ -2.04
NUCKS1-202ENST00000464938 CDC23Q9UJX2 597 aa2.3□□□□□ -2.04
NUCKS1-202ENST00000464938 ITGB1BP2Q9UKP3 347 aa2.3□□□□□ -2.04
NUCKS1-202ENST00000464938 LRCH1Q9Y2L9 728 aa2.3□□□□□ -2.04
NUCKS1-202ENST00000464938 DTNAQ9Y4J8 743 aa2.3□□□□□ -2.04
NUCKS1-202ENST00000464938 TNFRSF18Q9Y5U5 241 aa2.3□□□□□ -2.04
NUCKS1-202ENST00000464938 ADGRA2Q96PE1 1338 aa2.3□□□□□ -2.04
NUCKS1-202ENST00000464938 COL15A1P39059 1388 aa2.3□□□□□ -2.04
NUCKS1-202ENST00000464938 TRGV11A0A075B6L2 103 aa2.29□□□□□ -2.04
NUCKS1-202ENST00000464938 GRID2IPA4D2P6 1211 aa2.29□□□□□ -2.04
NUCKS1-202ENST00000464938 UNC119BA6NIH7 251 aa2.29□□□□□ -2.04
NUCKS1-202ENST00000464938 VWC2LB2RUY7 222 aa2.29□□□□□ -2.04
NUCKS1-202ENST00000464938 F5H423 210 aaPredicted RBP2.29□□□□□ -2.04
NUCKS1-202ENST00000464938 AGPSO00116 658 aa2.29□□□□□ -2.04
NUCKS1-202ENST00000464938 MPPED1O15442 326 aa2.29□□□□□ -2.04
NUCKS1-202ENST00000464938 FFAR2O15552 330 aa2.29□□□□□ -2.04
NUCKS1-202ENST00000464938 CBFA2T3O75081 653 aa2.29□□□□□ -2.04
NUCKS1-202ENST00000464938 TJP3O95049 919 aa2.29□□□□□ -2.04
NUCKS1-202ENST00000464938 NTSR2O95665 410 aa2.29□□□□□ -2.04
NUCKS1-202ENST00000464938 NDST3O95803 873 aa2.29□□□□□ -2.04
NUCKS1-202ENST00000464938 ERBB2P04626 1255 aa2.29□□□□□ -2.04
NUCKS1-202ENST00000464938 ITGA5P08648 1049 aa2.29□□□□□ -2.04
NUCKS1-202ENST00000464938 ARP10275 920 aa2.29□□□□□ -2.04
NUCKS1-202ENST00000464938 PPP3CBP16298 524 aa2.29□□□□□ -2.04
NUCKS1-202ENST00000464938 EGR1P18146 543 aa2.29□□□□□ -2.04
NUCKS1-202ENST00000464938 PCSK6P29122 969 aa2.29□□□□□ -2.04
NUCKS1-202ENST00000464938 UQCRC1P31930 480 aa2.29□□□□□ -2.04
NUCKS1-202ENST00000464938 ATICP31939 592 aa2.29□□□□□ -2.04
NUCKS1-202ENST00000464938 ADRA1BP35368 520 aa2.29□□□□□ -2.04
NUCKS1-202ENST00000464938 SERPINF1P36955 418 aa2.29□□□□□ -2.04
NUCKS1-202ENST00000464938 MPLP40238 635 aa2.29□□□□□ -2.04
NUCKS1-202ENST00000464938 FOLR3P41439 243 aa2.29□□□□□ -2.04
NUCKS1-202ENST00000464938 PDE6CP51160 858 aa2.29□□□□□ -2.04
NUCKS1-202ENST00000464938 TIRAPP58753 221 aa2.29□□□□□ -2.04
NUCKS1-202ENST00000464938 ITIH3Q06033 890 aa2.29□□□□□ -2.04
NUCKS1-202ENST00000464938 STK3Q13188 491 aa2.29□□□□□ -2.04
NUCKS1-202ENST00000464938 CCNIQ14094 377 aa2.29□□□□□ -2.04
NUCKS1-202ENST00000464938 DHX8Q14562 1220 aaKnown RBP2.29□□□□□ -2.04
NUCKS1-202ENST00000464938 KCNAB1Q14722 419 aa2.29□□□□□ -2.04
NUCKS1-202ENST00000464938 SF3B3Q15393 1217 aaKnown RBP2.29□□□□□ -2.04
NUCKS1-202ENST00000464938 PUM3Q15397 648 aaKnown RBP2.29□□□□□ -2.04
NUCKS1-202ENST00000464938 SLC5A9Q2M3M2 681 aa2.29□□□□□ -2.04
NUCKS1-202ENST00000464938 TRIM71Q2Q1W2 868 aaKnown RBP2.29□□□□□ -2.04
NUCKS1-202ENST00000464938 GRAMD1BQ3KR37 738 aa2.29□□□□□ -2.04
NUCKS1-202ENST00000464938 LSM12Q3MHD2 195 aaKnown RBP2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms