RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 FAM26FQ5R3K3 315 aa8.22□□□□□ -1.09
BRCC3-208ENST00000453705 CDKAL1Q5VV42 579 aa8.22□□□□□ -1.09
BRCC3-208ENST00000453705 NEK5Q6P3R8 708 aa8.22□□□□□ -1.09
BRCC3-208ENST00000453705 DTHD1Q6ZMT9 781 aa8.22□□□□□ -1.09
BRCC3-208ENST00000453705 TRMT44Q8IYL2 757 aaKnown RBP8.22□□□□□ -1.09
BRCC3-208ENST00000453705 AOPEPQ8N6M6 819 aa8.22□□□□□ -1.09
BRCC3-208ENST00000453705 ANKRD53Q8N9V6 530 aa8.22□□□□□ -1.09
BRCC3-208ENST00000453705 HDAC7Q8WUI4 952 aa8.22□□□□□ -1.09
BRCC3-208ENST00000453705 NAF1Q96HR8 494 aaKnown RBP8.22□□□□□ -1.09
BRCC3-208ENST00000453705 BRD8Q9H0E9 1235 aa8.22□□□□□ -1.09
BRCC3-208ENST00000453705 KCNF1Q9H3M0 494 aa8.22□□□□□ -1.09
BRCC3-208ENST00000453705 NDST4Q9H3R1 872 aa8.22□□□□□ -1.09
BRCC3-208ENST00000453705 MS4A5Q9H3V2 200 aa8.22□□□□□ -1.09
BRCC3-208ENST00000453705 EHD1Q9H4M9 534 aa8.22□□□□□ -1.09
BRCC3-208ENST00000453705 SH2D4AQ9H788 454 aa8.22□□□□□ -1.09
BRCC3-208ENST00000453705 CD93Q9NPY3 652 aa8.22□□□□□ -1.09
BRCC3-208ENST00000453705 GRID1Q9ULK0 1009 aa8.22□□□□□ -1.09
BRCC3-208ENST00000453705 USP20Q9Y2K6 914 aa8.22□□□□□ -1.09
BRCC3-208ENST00000453705 BECN2A8MW95 431 aa8.21□□□□□ -1.09
BRCC3-208ENST00000453705 DDX39AO00148 427 aaKnown RBP8.21□□□□□ -1.09
BRCC3-208ENST00000453705 RAD17O75943 681 aa8.21□□□□□ -1.09
BRCC3-208ENST00000453705 RTN3O95197 1032 aaPredicted RBP8.21□□□□□ -1.09
BRCC3-208ENST00000453705 ETV1P50549 477 aa8.21□□□□□ -1.09
BRCC3-208ENST00000453705 RNF144AP50876 292 aaPredicted RBP8.21□□□□□ -1.09
BRCC3-208ENST00000453705 PNOCQ13519 176 aa8.21□□□□□ -1.09
BRCC3-208ENST00000453705 GRM2Q14416 872 aa8.21□□□□□ -1.09
BRCC3-208ENST00000453705 MXD4Q14582 209 aaPredicted RBP8.21□□□□□ -1.09
BRCC3-208ENST00000453705 ZNF174Q15697 407 aa8.21□□□□□ -1.09
BRCC3-208ENST00000453705 MAPKAPK3Q16644 382 aa8.21□□□□□ -1.09
BRCC3-208ENST00000453705 SUPT20HL1Q3ZLR7 823 aa8.21□□□□□ -1.09
BRCC3-208ENST00000453705 Q4G0T1 1027 aa8.21□□□□□ -1.09
BRCC3-208ENST00000453705 TMEM119Q4V9L6 283 aa8.21□□□□□ -1.09
BRCC3-208ENST00000453705 TMEM240Q5SV17 173 aa8.21□□□□□ -1.09
BRCC3-208ENST00000453705 HEATR3Q7Z4Q2 680 aa8.21□□□□□ -1.09
BRCC3-208ENST00000453705 HID1Q8IV36 788 aa8.21□□□□□ -1.09
BRCC3-208ENST00000453705 ZFPM1Q8IX07 1006 aa8.21□□□□□ -1.09
BRCC3-208ENST00000453705 EFHBQ8N7U6 833 aa8.21□□□□□ -1.09
BRCC3-208ENST00000453705 NPLOC4Q8TAT6 608 aa8.21□□□□□ -1.09
BRCC3-208ENST00000453705 GPKOWQ92917 476 aaPredicted RBP eCLIP8.21□□□□□ -1.09
BRCC3-208ENST00000453705 CUL5Q93034 780 aa8.21□□□□□ -1.09
BRCC3-208ENST00000453705 FAM167AQ96KS9 214 aa8.21□□□□□ -1.09
BRCC3-208ENST00000453705 SYT17Q9BSW7 474 aa8.21□□□□□ -1.09
BRCC3-208ENST00000453705 PHACTR1Q9C0D0 580 aa8.21□□□□□ -1.09
BRCC3-208ENST00000453705 NSRP1Q9H0G5 558 aaKnown RBP8.21□□□□□ -1.09
BRCC3-208ENST00000453705 TTC12Q9H892 705 aaPredicted RBP8.21□□□□□ -1.09
BRCC3-208ENST00000453705 FAM86C1Q9NVL1 165 aa8.21□□□□□ -1.09
BRCC3-208ENST00000453705 TBCCD1Q9NVR7 557 aa8.21□□□□□ -1.09
BRCC3-208ENST00000453705 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.21□□□□□ -1.09
BRCC3-208ENST00000453705 KIF17Q9P2E2 1029 aa8.21□□□□□ -1.09
BRCC3-208ENST00000453705 ARHGAP26Q9UNA1 814 aa8.21□□□□□ -1.09
BRCC3-208ENST00000453705 PCDHB12Q9Y5F1 795 aa8.21□□□□□ -1.09
BRCC3-208ENST00000453705 ABCB11O95342 1321 aa8.21□□□□□ -1.1
BRCC3-208ENST00000453705 FRMPD4Q14CM0 1322 aa8.21□□□□□ -1.1
BRCC3-208ENST00000453705 OTOFQ9HC10 1997 aa8.21□□□□□ -1.1
BRCC3-208ENST00000453705 H0YAE9 185 aa8.21□□□□□ -1.1
BRCC3-208ENST00000453705 VWA5AO00534 786 aa8.21□□□□□ -1.1
BRCC3-208ENST00000453705 ADAMTS3O15072 1205 aa8.21□□□□□ -1.1
BRCC3-208ENST00000453705 PPP1R11O60927 126 aaPredicted RBP8.21□□□□□ -1.1
BRCC3-208ENST00000453705 TFE3P19532 575 aaPredicted RBP8.21□□□□□ -1.1
BRCC3-208ENST00000453705 HOXA11P31270 313 aaPredicted RBP8.21□□□□□ -1.1
BRCC3-208ENST00000453705 CPA2P48052 419 aa8.21□□□□□ -1.1
BRCC3-208ENST00000453705 HADHBP55084 474 aaKnown RBP8.21□□□□□ -1.1
BRCC3-208ENST00000453705 GSCP56915 257 aaPredicted RBP8.21□□□□□ -1.1
BRCC3-208ENST00000453705 LAMB3Q13751 1172 aa8.21□□□□□ -1.1
BRCC3-208ENST00000453705 DBN1Q16643 649 aa8.21□□□□□ -1.1
BRCC3-208ENST00000453705 ZNF792Q3KQV3 632 aa8.21□□□□□ -1.1
BRCC3-208ENST00000453705 SLFN13Q68D06 897 aa8.21□□□□□ -1.1
BRCC3-208ENST00000453705 TAF2Q6P1X5 1199 aa8.21□□□□□ -1.1
BRCC3-208ENST00000453705 FAM160B2Q86V87 743 aa8.21□□□□□ -1.1
BRCC3-208ENST00000453705 CAMKK1Q8N5S9 505 aa8.21□□□□□ -1.1
BRCC3-208ENST00000453705 VCPIP1Q96JH7 1222 aa8.21□□□□□ -1.1
BRCC3-208ENST00000453705 PRMT6Q96LA8 375 aaPredicted RBP8.21□□□□□ -1.1
BRCC3-208ENST00000453705 LENG8Q96PV6 779 aaPredicted RBP8.21□□□□□ -1.1
BRCC3-208ENST00000453705 BCL7BQ9BQE9 202 aa8.21□□□□□ -1.1
BRCC3-208ENST00000453705 TACO1Q9BSH4 297 aaKnown RBP8.21□□□□□ -1.1
BRCC3-208ENST00000453705 MMADHCQ9H3L0 296 aaPredicted RBP8.21□□□□□ -1.1
BRCC3-208ENST00000453705 NCOR1P1Q9H4R4 102 aa8.21□□□□□ -1.1
BRCC3-208ENST00000453705 MROH8Q9H579 483 aa8.21□□□□□ -1.1
BRCC3-208ENST00000453705 LMCD1Q9NZU5 365 aa8.21□□□□□ -1.1
BRCC3-208ENST00000453705 TBC1D14Q9P2M4 693 aa8.21□□□□□ -1.1
BRCC3-208ENST00000453705 BLACEA4D250 179 aa8.2□□□□□ -1.1
BRCC3-208ENST00000453705 MAGEA10P43363 369 aaPredicted RBP8.2□□□□□ -1.1
BRCC3-208ENST00000453705 CASP6P55212 293 aa8.2□□□□□ -1.1
BRCC3-208ENST00000453705 HDAC4P56524 1084 aa8.2□□□□□ -1.1
BRCC3-208ENST00000453705 KLF1Q13351 362 aaPredicted RBP8.2□□□□□ -1.1
BRCC3-208ENST00000453705 TLR1Q15399 786 aa8.2□□□□□ -1.1
BRCC3-208ENST00000453705 FAM47CQ5HY64 1035 aa8.2□□□□□ -1.1
BRCC3-208ENST00000453705 ZNF658Q5TYW1 1059 aaPredicted RBP8.2□□□□□ -1.1
BRCC3-208ENST00000453705 HGSNATQ68CP4 663 aa8.2□□□□□ -1.1
BRCC3-208ENST00000453705 C10orf53Q8N6V4 93 aa8.2□□□□□ -1.1
BRCC3-208ENST00000453705 ZNF397Q8NF99 534 aaPredicted RBP8.2□□□□□ -1.1
BRCC3-208ENST00000453705 PTCD2Q8WV60 388 aaKnown RBP8.2□□□□□ -1.1
BRCC3-208ENST00000453705 RAPGEF5Q92565 580 aa8.2□□□□□ -1.1
BRCC3-208ENST00000453705 AHCYL2Q96HN2 611 aaKnown RBP8.2□□□□□ -1.1
BRCC3-208ENST00000453705 SLC2A13Q96QE2 648 aa8.2□□□□□ -1.1
BRCC3-208ENST00000453705 KCNMB3Q9NPA1 279 aa8.2□□□□□ -1.1
BRCC3-208ENST00000453705 RPRD1BQ9NQG5 326 aaKnown RBP8.2□□□□□ -1.1
BRCC3-208ENST00000453705 INTS7Q9NVH2 962 aaKnown RBP8.2□□□□□ -1.1
BRCC3-208ENST00000453705 EVA1BQ9NVM1 165 aa8.2□□□□□ -1.1
BRCC3-208ENST00000453705 C5AR2Q9P296 337 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms