RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 FOXP2O15409 715 aa11.18□□□□□ -0.62
LINC00342-202ENST00000448494 HOXC11O43248 304 aaPredicted RBP11.18□□□□□ -0.62
LINC00342-202ENST00000448494 PLEKHA8P1O95397 391 aa11.18□□□□□ -0.62
LINC00342-202ENST00000448494 TSPY3P0CV98 308 aa11.18□□□□□ -0.62
LINC00342-202ENST00000448494 TSPY8P0CW00 308 aa11.18□□□□□ -0.62
LINC00342-202ENST00000448494 KRT5P13647 590 aa11.18□□□□□ -0.62
LINC00342-202ENST00000448494 RAG1P15918 1043 aa11.18□□□□□ -0.62
LINC00342-202ENST00000448494 CTNNA2P26232 953 aa11.18□□□□□ -0.62
LINC00342-202ENST00000448494 BMPR1AP36894 532 aa11.18□□□□□ -0.62
LINC00342-202ENST00000448494 TSPY1Q01534 308 aa11.18□□□□□ -0.62
LINC00342-202ENST00000448494 CCNIQ14094 377 aa11.18□□□□□ -0.62
LINC00342-202ENST00000448494 SMU1Q2TAY7 513 aa11.18□□□□□ -0.62
LINC00342-202ENST00000448494 RARS2Q5T160 578 aaKnown RBP11.18□□□□□ -0.62
LINC00342-202ENST00000448494 RALGPS2Q86X27 583 aaPredicted RBP11.18□□□□□ -0.62
LINC00342-202ENST00000448494 PPM1KQ8N3J5 372 aa11.18□□□□□ -0.62
LINC00342-202ENST00000448494 GSTCDQ8NEC7 633 aa11.18□□□□□ -0.62
LINC00342-202ENST00000448494 HM13Q8TCT9 377 aa11.18□□□□□ -0.62
LINC00342-202ENST00000448494 C18orf8Q96DM3 657 aa11.18□□□□□ -0.62
LINC00342-202ENST00000448494 PRR11Q96HE9 360 aaPredicted RBP11.18□□□□□ -0.62
LINC00342-202ENST00000448494 ZNF496Q96IT1 587 aaPredicted RBP11.18□□□□□ -0.62
LINC00342-202ENST00000448494 NLRP4Q96MN2 994 aa11.18□□□□□ -0.62
LINC00342-202ENST00000448494 DCUN1D5Q9BTE7 237 aa11.18□□□□□ -0.62
LINC00342-202ENST00000448494 INO80BQ9C086 356 aaPredicted RBP11.18□□□□□ -0.62
LINC00342-202ENST00000448494 SSU72Q9NP77 194 aaKnown RBP11.18□□□□□ -0.62
LINC00342-202ENST00000448494 FBXO6Q9NRD1 293 aaPredicted RBP11.18□□□□□ -0.62
LINC00342-202ENST00000448494 ABI2Q9NYB9 513 aaPredicted RBP11.18□□□□□ -0.62
LINC00342-202ENST00000448494 EBF1Q9UH73 591 aa11.18□□□□□ -0.62
LINC00342-202ENST00000448494 POLIQ9UNA4 740 aa11.18□□□□□ -0.62
LINC00342-202ENST00000448494 AP4S1Q9Y587 144 aa11.18□□□□□ -0.62
LINC00342-202ENST00000448494 ZNF839A8K0R7 811 aa11.18□□□□□ -0.62
LINC00342-202ENST00000448494 H7C0C1 242 aa11.18□□□□□ -0.62
LINC00342-202ENST00000448494 XPO1O14980 1071 aaKnown RBP11.18□□□□□ -0.62
LINC00342-202ENST00000448494 NOL4O94818 638 aa11.18□□□□□ -0.62
LINC00342-202ENST00000448494 H6PDO95479 791 aa11.18□□□□□ -0.62
LINC00342-202ENST00000448494 DDX58O95786 925 aaKnown RBP11.18□□□□□ -0.62
LINC00342-202ENST00000448494 MYCP01106 439 aaPredicted RBP11.18□□□□□ -0.62
LINC00342-202ENST00000448494 CETPP11597 493 aa11.18□□□□□ -0.62
LINC00342-202ENST00000448494 TNNI2P48788 182 aa11.18□□□□□ -0.62
LINC00342-202ENST00000448494 APLP1P51693 650 aa11.18□□□□□ -0.62
LINC00342-202ENST00000448494 PHC1P78364 1004 aa11.18□□□□□ -0.62
LINC00342-202ENST00000448494 PRKCEQ02156 737 aa11.18□□□□□ -0.62
LINC00342-202ENST00000448494 PRKCQQ04759 706 aa11.18□□□□□ -0.62
LINC00342-202ENST00000448494 PTGDRQ13258 359 aa11.18□□□□□ -0.62
LINC00342-202ENST00000448494 TTC38Q5R3I4 469 aa11.18□□□□□ -0.62
LINC00342-202ENST00000448494 C6orf10Q5SRN2 563 aa11.18□□□□□ -0.62
LINC00342-202ENST00000448494 DCAF12L1Q5VU92 463 aa11.18□□□□□ -0.62
LINC00342-202ENST00000448494 BRSK2Q8IWQ3 736 aa11.18□□□□□ -0.62
LINC00342-202ENST00000448494 RTKN2Q8IZC4 609 aa11.18□□□□□ -0.62
LINC00342-202ENST00000448494 ANKRD49Q8WVL7 239 aa11.18□□□□□ -0.62
LINC00342-202ENST00000448494 KRT35Q92764 455 aa11.18□□□□□ -0.62
LINC00342-202ENST00000448494 ATP2A3Q93084 1043 aa11.18□□□□□ -0.62
LINC00342-202ENST00000448494 FAM20AQ96MK3 541 aa11.18□□□□□ -0.62
LINC00342-202ENST00000448494 TRABDQ9H4I3 376 aa11.18□□□□□ -0.62
LINC00342-202ENST00000448494 KCNK13Q9HB14 408 aa11.18□□□□□ -0.62
LINC00342-202ENST00000448494 TBK1Q9UHD2 729 aa11.18□□□□□ -0.62
LINC00342-202ENST00000448494 DNM3Q9UQ16 869 aa11.18□□□□□ -0.62
LINC00342-202ENST00000448494 ZNF652Q9Y2D9 606 aa11.18□□□□□ -0.62
LINC00342-202ENST00000448494 SYNGAP1Q96PV0 1343 aa11.17□□□□□ -0.62
LINC00342-202ENST00000448494 PSME4Q14997 1843 aa11.17□□□□□ -0.62
LINC00342-202ENST00000448494 MSI1O43347 362 aaKnown RBP11.17□□□□□ -0.62
LINC00342-202ENST00000448494 THAP12O43422 761 aa11.17□□□□□ -0.62
LINC00342-202ENST00000448494 KLHL41O60662 606 aa11.17□□□□□ -0.62
LINC00342-202ENST00000448494 ATP5BP06576 529 aaKnown RBP11.17□□□□□ -0.62
LINC00342-202ENST00000448494 TTKP33981 857 aa11.17□□□□□ -0.62
LINC00342-202ENST00000448494 PTGS2P35354 604 aa11.17□□□□□ -0.62
LINC00342-202ENST00000448494 GNL1P36915 607 aaPredicted RBP11.17□□□□□ -0.62
LINC00342-202ENST00000448494 NLRP6P59044 892 aa11.17□□□□□ -0.62
LINC00342-202ENST00000448494 GBE1Q04446 702 aa11.17□□□□□ -0.62
LINC00342-202ENST00000448494 FCHO2Q0JRZ9 810 aa11.17□□□□□ -0.62
LINC00342-202ENST00000448494 RAPGEF1Q13905 1077 aa11.17□□□□□ -0.62
LINC00342-202ENST00000448494 TRIP13Q15645 432 aaPredicted RBP11.17□□□□□ -0.62
LINC00342-202ENST00000448494 PROSER3Q2NL68 480 aa11.17□□□□□ -0.62
LINC00342-202ENST00000448494 SLFN13Q68D06 897 aa11.17□□□□□ -0.62
LINC00342-202ENST00000448494 RHBDF2Q6PJF5 856 aa11.17□□□□□ -0.62
LINC00342-202ENST00000448494 XKR5Q6UX68 686 aa11.17□□□□□ -0.62
LINC00342-202ENST00000448494 RNF19BQ6ZMZ0 732 aa11.17□□□□□ -0.62
LINC00342-202ENST00000448494 TDRPQ86YL5 185 aa11.17□□□□□ -0.62
LINC00342-202ENST00000448494 SLC15A4Q8N697 577 aa11.17□□□□□ -0.62
LINC00342-202ENST00000448494 TTC13Q8NBP0 860 aa11.17□□□□□ -0.62
LINC00342-202ENST00000448494 ADCY4Q8NFM4 1077 aa11.17□□□□□ -0.62
LINC00342-202ENST00000448494 IGDCC4Q8TDY8 1250 aa11.17□□□□□ -0.62
LINC00342-202ENST00000448494 KBTBD7Q8WVZ9 684 aa11.17□□□□□ -0.62
LINC00342-202ENST00000448494 METTL2AQ96IZ6 378 aaKnown RBP11.17□□□□□ -0.62
LINC00342-202ENST00000448494 C1orf50Q9BV19 199 aa11.17□□□□□ -0.62
LINC00342-202ENST00000448494 DCLK3Q9C098 648 aa11.17□□□□□ -0.62
LINC00342-202ENST00000448494 MAGEF1Q9HAY2 307 aa11.17□□□□□ -0.62
LINC00342-202ENST00000448494 LY9Q9HBG7 655 aa11.17□□□□□ -0.62
LINC00342-202ENST00000448494 NEK6Q9HC98 313 aa11.17□□□□□ -0.62
LINC00342-202ENST00000448494 THG1LQ9NWX6 298 aaKnown RBP11.17□□□□□ -0.62
LINC00342-202ENST00000448494 PI4KBQ9UBF8 816 aa11.17□□□□□ -0.62
LINC00342-202ENST00000448494 UBA2Q9UBT2 640 aaPredicted RBP11.17□□□□□ -0.62
LINC00342-202ENST00000448494 TMCC3Q9ULS5 477 aa11.17□□□□□ -0.62
LINC00342-202ENST00000448494 TACC3Q9Y6A5 838 aa11.17□□□□□ -0.62
LINC00342-202ENST00000448494 MYOCOSA0A1B0GUC4 107 aa11.17□□□□□ -0.62
LINC00342-202ENST00000448494 NKRFO15226 690 aaKnown RBP eCLIP11.17□□□□□ -0.62
LINC00342-202ENST00000448494 SNAP91O60641 907 aa11.17□□□□□ -0.62
LINC00342-202ENST00000448494 ZC3H11AO75152 810 aaKnown RBP eCLIP11.17□□□□□ -0.62
LINC00342-202ENST00000448494 IL1BP01584 269 aa11.17□□□□□ -0.62
LINC00342-202ENST00000448494 CALM1P0DP23 149 aa11.17□□□□□ -0.62
LINC00342-202ENST00000448494 CALM2P0DP24 149 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms