RNA–Protein interactions for RNA: ENST00000441350.2

VPS13B-204, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-204ENST00000441350 ATAD1Q8NBU5 361 aa22.26■■□□□ 1.15
VPS13B-204ENST00000441350 MSANTD4Q8NCY6 345 aa22.26■■□□□ 1.15
VPS13B-204ENST00000441350 ARHGEF26Q96DR7 871 aa22.26■■□□□ 1.15
VPS13B-204ENST00000441350 HSFY1Q96LI6 401 aa22.26■■□□□ 1.15
VPS13B-204ENST00000441350 PGLYRP2Q96PD5 576 aa22.26■■□□□ 1.15
VPS13B-204ENST00000441350 KCNK16Q96T55 309 aa22.26■■□□□ 1.15
VPS13B-204ENST00000441350 TSGA10Q9BZW7 698 aa22.26■■□□□ 1.15
VPS13B-204ENST00000441350 TJP2Q9UDY2 1190 aa22.26■■□□□ 1.15
VPS13B-204ENST00000441350 TRIM10Q9UDY6 481 aa22.26■■□□□ 1.15
VPS13B-204ENST00000441350 GRM6O15303 877 aa22.25■■□□□ 1.15
VPS13B-204ENST00000441350 ABLIM3O94929 683 aa22.25■■□□□ 1.15
VPS13B-204ENST00000441350 CXCL14O95715 111 aa22.25■■□□□ 1.15
VPS13B-204ENST00000441350 ERBB2P04626 1255 aa22.25■■□□□ 1.15
VPS13B-204ENST00000441350 CYP1A2P05177 515 aa22.25■■□□□ 1.15
VPS13B-204ENST00000441350 MSNP26038 577 aaKnown RBP22.25■■□□□ 1.15
VPS13B-204ENST00000441350 MAGEA11P43364 429 aa22.25■■□□□ 1.15
VPS13B-204ENST00000441350 RGS7P49802 495 aa22.25■■□□□ 1.15
VPS13B-204ENST00000441350 MAP3K7CLP57077 242 aa22.25■■□□□ 1.15
VPS13B-204ENST00000441350 VSTM1Q6UX27 236 aa22.25■■□□□ 1.15
VPS13B-204ENST00000441350 TMC7Q7Z402 723 aa22.25■■□□□ 1.15
VPS13B-204ENST00000441350 SPPL2BQ8TCT7 592 aa22.25■■□□□ 1.15
VPS13B-204ENST00000441350 KCTD13Q8WZ19 329 aa22.25■■□□□ 1.15
VPS13B-204ENST00000441350 ZNF653Q96CK0 615 aa22.25■■□□□ 1.15
VPS13B-204ENST00000441350 C18orf8Q96DM3 657 aa22.25■■□□□ 1.15
VPS13B-204ENST00000441350 TCF25Q9BQ70 676 aa22.25■■□□□ 1.15
VPS13B-204ENST00000441350 DMAP1Q9NPF5 467 aaPredicted RBP22.25■■□□□ 1.15
VPS13B-204ENST00000441350 LZTFL1Q9NQ48 299 aa22.25■■□□□ 1.15
VPS13B-204ENST00000441350 AVENQ9NQS1 362 aaPredicted RBP22.25■■□□□ 1.15
VPS13B-204ENST00000441350 NCANO14594 1321 aa22.25■■□□□ 1.15
VPS13B-204ENST00000441350 A0A0A6YYK5 440 aaPredicted RBP22.24■■□□□ 1.15
VPS13B-204ENST00000441350 HHLA1C9JL84 531 aa22.24■■□□□ 1.15
VPS13B-204ENST00000441350 H3BNC9 293 aa22.24■■□□□ 1.15
VPS13B-204ENST00000441350 TEX28O15482 410 aa22.24■■□□□ 1.15
VPS13B-204ENST00000441350 KRT86O43790 486 aa22.24■■□□□ 1.15
VPS13B-204ENST00000441350 RRM1P23921 792 aa22.24■■□□□ 1.15
VPS13B-204ENST00000441350 CAMK1Q14012 370 aa22.24■■□□□ 1.15
VPS13B-204ENST00000441350 TCEAL1Q15170 157 aa22.24■■□□□ 1.15
VPS13B-204ENST00000441350 ARHGAP29Q52LW3 1261 aa22.24■■□□□ 1.15
VPS13B-204ENST00000441350 TPGS2Q68CL5 300 aa22.24■■□□□ 1.15
VPS13B-204ENST00000441350 CHRDL2Q6WN34 429 aa22.24■■□□□ 1.15
VPS13B-204ENST00000441350 ZNF461Q8TAF7 563 aa22.24■■□□□ 1.15
VPS13B-204ENST00000441350 TLR9Q9NR96 1032 aa22.24■■□□□ 1.15
VPS13B-204ENST00000441350 ST7Q9NRC1 585 aa22.24■■□□□ 1.15
VPS13B-204ENST00000441350 CNOT8Q9UFF9 292 aaKnown RBP22.24■■□□□ 1.15
VPS13B-204ENST00000441350 SALL4Q9UJQ4 1053 aa22.24■■□□□ 1.15
VPS13B-204ENST00000441350 ESPNB1AK53 854 aa22.24■■□□□ 1.15
VPS13B-204ENST00000441350 E5RJQ4 531 aa22.24■■□□□ 1.15
VPS13B-204ENST00000441350 FSCN2O14926 492 aa22.24■■□□□ 1.15
VPS13B-204ENST00000441350 ATMINO43313 823 aaPredicted RBP22.24■■□□□ 1.15
VPS13B-204ENST00000441350 CNPP09543 421 aaKnown RBP22.24■■□□□ 1.15
VPS13B-204ENST00000441350 NDUFV1P49821 464 aa22.24■■□□□ 1.15
VPS13B-204ENST00000441350 GSCP56915 257 aaPredicted RBP22.24■■□□□ 1.15
VPS13B-204ENST00000441350 CYP4A22Q5TCH4 519 aa22.24■■□□□ 1.15
VPS13B-204ENST00000441350 LIN9Q5TKA1 542 aa22.24■■□□□ 1.15
VPS13B-204ENST00000441350 PPP2R2DQ66LE6 453 aa22.24■■□□□ 1.15
VPS13B-204ENST00000441350 MRPL43Q8N983 215 aaKnown RBP22.24■■□□□ 1.15
VPS13B-204ENST00000441350 IPO4Q8TEX9 1081 aaKnown RBP22.24■■□□□ 1.15
VPS13B-204ENST00000441350 RFFLQ8WZ73 363 aa22.24■■□□□ 1.15
VPS13B-204ENST00000441350 CRISPLD1Q9H336 500 aa22.24■■□□□ 1.15
VPS13B-204ENST00000441350 PNPLA8Q9NP80 782 aa22.24■■□□□ 1.15
VPS13B-204ENST00000441350 AFF4Q9UHB7 1163 aaKnown RBP22.24■■□□□ 1.15
VPS13B-204ENST00000441350 STRIP2Q9ULQ0 834 aa22.24■■□□□ 1.15
VPS13B-204ENST00000441350 PATJQ8NI35 1801 aa22.23■■□□□ 1.15
VPS13B-204ENST00000441350 TCRBV5S1A1TA0A578 114 aa22.23■■□□□ 1.15
VPS13B-204ENST00000441350 F8VP50 259 aa22.23■■□□□ 1.15
VPS13B-204ENST00000441350 ACADSBP45954 432 aa22.23■■□□□ 1.15
VPS13B-204ENST00000441350 SMAD3P84022 425 aaKnown RBP22.23■■□□□ 1.15
VPS13B-204ENST00000441350 MLLT1Q03111 559 aaPredicted RBP22.23■■□□□ 1.15
VPS13B-204ENST00000441350 GPM6BQ13491 265 aa22.23■■□□□ 1.15
VPS13B-204ENST00000441350 SMC1AQ14683 1233 aaKnown RBP22.23■■□□□ 1.15
VPS13B-204ENST00000441350 PLEKHA7Q6IQ23 1121 aa22.23■■□□□ 1.15
VPS13B-204ENST00000441350 XYLT1Q86Y38 959 aa22.23■■□□□ 1.15
VPS13B-204ENST00000441350 TTC9BQ8N6N2 239 aa22.23■■□□□ 1.15
VPS13B-204ENST00000441350 MIS12Q9H081 205 aa22.23■■□□□ 1.15
VPS13B-204ENST00000441350 SYNCQ9H7C4 482 aa22.23■■□□□ 1.15
VPS13B-204ENST00000441350 NGRNQ9NPE2 291 aaKnown RBP22.23■■□□□ 1.15
VPS13B-204ENST00000441350 ENTPD7Q9NQZ7 604 aa22.23■■□□□ 1.15
VPS13B-204ENST00000441350 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP22.22■■□□□ 1.15
VPS13B-204ENST00000441350 C2orf71A6NGG8 1288 aa22.22■■□□□ 1.15
VPS13B-204ENST00000441350 HAPLN1P10915 354 aaPredicted RBP22.22■■□□□ 1.15
VPS13B-204ENST00000441350 ATF2P15336 505 aa22.22■■□□□ 1.15
VPS13B-204ENST00000441350 GRIK1P39086 918 aa22.22■■□□□ 1.15
VPS13B-204ENST00000441350 SNX16P57768 344 aa22.22■■□□□ 1.15
VPS13B-204ENST00000441350 ADCY1Q08828 1119 aa22.22■■□□□ 1.15
VPS13B-204ENST00000441350 DUSP4Q13115 394 aa22.22■■□□□ 1.15
VPS13B-204ENST00000441350 ZNF268Q14587 947 aaPredicted RBP22.22■■□□□ 1.15
VPS13B-204ENST00000441350 RAB41Q5JT25 222 aa22.22■■□□□ 1.15
VPS13B-204ENST00000441350 LLGL2Q6P1M3 1020 aa22.22■■□□□ 1.15
VPS13B-204ENST00000441350 SLC35G2Q8TBE7 412 aa22.22■■□□□ 1.15
VPS13B-204ENST00000441350 MCRS1Q96EZ8 462 aa22.22■■□□□ 1.15
VPS13B-204ENST00000441350 C8orf48Q96LL4 319 aa22.22■■□□□ 1.15
VPS13B-204ENST00000441350 SLC28A3Q9HAS3 691 aa22.22■■□□□ 1.15
VPS13B-204ENST00000441350 WDR35Q9P2L0 1181 aa22.22■■□□□ 1.15
VPS13B-204ENST00000441350 MYO1AQ9UBC5 1043 aa22.22■■□□□ 1.15
VPS13B-204ENST00000441350 HSFX1Q9UBD0 423 aa22.22■■□□□ 1.15
VPS13B-204ENST00000441350 GUCA1BQ9UMX6 200 aa22.22■■□□□ 1.15
VPS13B-204ENST00000441350 MAMLD1Q13495 774 aa22.21■■□□□ 1.15
VPS13B-204ENST00000441350 PHLDB2Q86SQ0 1253 aa22.21■■□□□ 1.15
VPS13B-204ENST00000441350 RHOT2Q8IXI1 618 aa22.21■■□□□ 1.15
VPS13B-204ENST00000441350 RNF10Q8N5U6 811 aaKnown RBP22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms