RNA–Protein interactions for RNA: ENST00000429762.7

VSX1-205, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,977 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-205ENST00000429762 UPP2O95045 317 aa23.23■■□□□ 1.31
VSX1-205ENST00000429762 PBX3P40426 434 aa23.23■■□□□ 1.31
VSX1-205ENST00000429762 SLC6A3Q01959 620 aa23.23■■□□□ 1.31
VSX1-205ENST00000429762 C15orf59Q2T9L4 293 aaPredicted RBP23.23■■□□□ 1.31
VSX1-205ENST00000429762 ZFYVE27Q5T4F4 411 aa23.23■■□□□ 1.31
VSX1-205ENST00000429762 OVOS1Q6IE37 1185 aa23.23■■□□□ 1.31
VSX1-205ENST00000429762 CLEC20AQ6ZU45 233 aa23.23■■□□□ 1.31
VSX1-205ENST00000429762 FAM35AQ86V20 835 aa23.23■■□□□ 1.31
VSX1-205ENST00000429762 SLC13A5Q86YT5 568 aaPredicted RBP23.23■■□□□ 1.31
VSX1-205ENST00000429762 CCDC50Q8IVM0 306 aa23.23■■□□□ 1.31
VSX1-205ENST00000429762 GSPT2Q8IYD1 628 aaKnown RBP23.23■■□□□ 1.31
VSX1-205ENST00000429762 RXFP2Q8WXD0 754 aa23.23■■□□□ 1.31
VSX1-205ENST00000429762 MYLPFQ96A32 169 aa23.23■■□□□ 1.31
VSX1-205ENST00000429762 TMEM30AQ9NV96 361 aa23.23■■□□□ 1.31
VSX1-205ENST00000429762 TMLHEQ9NVH6 421 aa23.23■■□□□ 1.31
VSX1-205ENST00000429762 KANSL3Q9P2N6 904 aa23.23■■□□□ 1.31
VSX1-205ENST00000429762 MICAL3Q7RTP6 2002 aa23.23■■□□□ 1.31
VSX1-205ENST00000429762 ZSCAN5CA6NGD5 496 aaPredicted RBP23.22■■□□□ 1.31
VSX1-205ENST00000429762 TBKBP1A7MCY6 615 aa23.22■■□□□ 1.31
VSX1-205ENST00000429762 XPO1O14980 1071 aaKnown RBP23.22■■□□□ 1.31
VSX1-205ENST00000429762 RAD51CO43502 376 aa23.22■■□□□ 1.31
VSX1-205ENST00000429762 CYP11A1P05108 521 aa23.22■■□□□ 1.31
VSX1-205ENST00000429762 CLTBP09497 229 aa23.22■■□□□ 1.31
VSX1-205ENST00000429762 HSPA1AP0DMV8 641 aaKnown RBP23.22■■□□□ 1.31
VSX1-205ENST00000429762 HSPA1BP0DMV9 641 aaKnown RBP23.22■■□□□ 1.31
VSX1-205ENST00000429762 NPR3P17342 541 aa23.22■■□□□ 1.31
VSX1-205ENST00000429762 NIPA2Q8N8Q9 360 aa23.22■■□□□ 1.31
VSX1-205ENST00000429762 STK32AQ8WU08 396 aa23.22■■□□□ 1.31
VSX1-205ENST00000429762 KHSRPQ92945 711 aaKnown RBP eCLIP23.22■■□□□ 1.31
VSX1-205ENST00000429762 RNF25Q96BH1 459 aaPredicted RBP23.22■■□□□ 1.31
VSX1-205ENST00000429762 VWCEQ96DN2 955 aa23.22■■□□□ 1.31
VSX1-205ENST00000429762 ZWILCHQ9H900 591 aa23.22■■□□□ 1.31
VSX1-205ENST00000429762 RAB21Q9UL25 225 aa23.22■■□□□ 1.31
VSX1-205ENST00000429762 SBDSQ9Y3A5 250 aaKnown RBP eCLIP23.22■■□□□ 1.31
VSX1-205ENST00000429762 LRCH4O75427 683 aa23.21■■□□□ 1.31
VSX1-205ENST00000429762 AP1G2O75843 785 aa23.21■■□□□ 1.31
VSX1-205ENST00000429762 FAM200BP0CF97 657 aa23.21■■□□□ 1.31
VSX1-205ENST00000429762 GPD1P21695 349 aa23.21■■□□□ 1.31
VSX1-205ENST00000429762 PCSK1P29120 753 aa23.21■■□□□ 1.31
VSX1-205ENST00000429762 PLA2G4AP47712 749 aa23.21■■□□□ 1.31
VSX1-205ENST00000429762 ADIGQ0VDE8 80 aa23.21■■□□□ 1.31
VSX1-205ENST00000429762 CDO1Q16878 200 aa23.21■■□□□ 1.31
VSX1-205ENST00000429762 SMTNL2Q2TAL5 461 aa23.21■■□□□ 1.31
VSX1-205ENST00000429762 C1orf53Q5VUE5 145 aa23.21■■□□□ 1.31
VSX1-205ENST00000429762 CFAP57Q96MR6 1250 aa23.21■■□□□ 1.31
VSX1-205ENST00000429762 HEMGNQ9BXL5 484 aa23.21■■□□□ 1.31
VSX1-205ENST00000429762 PRDM5Q9NQX1 630 aaPredicted RBP23.21■■□□□ 1.31
VSX1-205ENST00000429762 PCDHB8Q9UN66 801 aa23.21■■□□□ 1.31
VSX1-205ENST00000429762 KIAA0100Q14667 2235 aaKnown RBP23.21■■□□□ 1.31
VSX1-205ENST00000429762 C2CD4BA6NLJ0 364 aa23.21■■□□□ 1.31
VSX1-205ENST00000429762 KRT1P04264 644 aa23.21■■□□□ 1.31
VSX1-205ENST00000429762 PDGFRAP16234 1089 aa23.21■■□□□ 1.31
VSX1-205ENST00000429762 ITGB8P26012 769 aa23.21■■□□□ 1.31
VSX1-205ENST00000429762 IL1R2P27930 398 aa23.21■■□□□ 1.31
VSX1-205ENST00000429762 INTS6LQ5JSJ4 861 aaKnown RBP23.21■■□□□ 1.31
VSX1-205ENST00000429762 CCDC70Q6NSX1 233 aa23.21■■□□□ 1.31
VSX1-205ENST00000429762 LRRTM3Q86VH5 581 aa23.21■■□□□ 1.31
VSX1-205ENST00000429762 NPAS4Q8IUM7 802 aa23.21■■□□□ 1.31
VSX1-205ENST00000429762 KATNAL2Q8IYT4 538 aa23.21■■□□□ 1.31
VSX1-205ENST00000429762 CRIPAKQ8N1N5 446 aa23.21■■□□□ 1.31
VSX1-205ENST00000429762 MYCBPAPQ8TBZ2 947 aa23.21■■□□□ 1.31
VSX1-205ENST00000429762 KCNK16Q96T55 309 aa23.21■■□□□ 1.31
VSX1-205ENST00000429762 SMOQ99835 787 aa23.21■■□□□ 1.31
VSX1-205ENST00000429762 PCSK1NQ9UHG2 260 aa23.21■■□□□ 1.31
VSX1-205ENST00000429762 OR4Q2P0C623 313 aa23.2■■□□□ 1.3
VSX1-205ENST00000429762 NDUFV1P49821 464 aa23.2■■□□□ 1.3
VSX1-205ENST00000429762 PLCB3Q01970 1234 aa23.2■■□□□ 1.3
VSX1-205ENST00000429762 FNIP1Q8TF40 1166 aa23.2■■□□□ 1.3
VSX1-205ENST00000429762 B3GALT6Q96L58 329 aa23.2■■□□□ 1.3
VSX1-205ENST00000429762 DSEQ9UL01 958 aa23.2■■□□□ 1.3
VSX1-205ENST00000429762 TARSL2A2RTX5 802 aaKnown RBP23.2■■□□□ 1.3
VSX1-205ENST00000429762 NT5C1B-RDH14C9J2C7 533 aa23.2■■□□□ 1.3
VSX1-205ENST00000429762 NRP1O14786 923 aa23.2■■□□□ 1.3
VSX1-205ENST00000429762 SART1O43290 800 aaKnown RBP23.2■■□□□ 1.3
VSX1-205ENST00000429762 TADA2AO75478 443 aa23.2■■□□□ 1.3
VSX1-205ENST00000429762 GLI1P08151 1106 aa23.2■■□□□ 1.3
VSX1-205ENST00000429762 RARAP10276 462 aa23.2■■□□□ 1.3
VSX1-205ENST00000429762 SLC11A1P49279 550 aa23.2■■□□□ 1.3
VSX1-205ENST00000429762 ATP11AP98196 1134 aa23.2■■□□□ 1.3
VSX1-205ENST00000429762 SLC25A11Q02978 314 aaKnown RBP23.2■■□□□ 1.3
VSX1-205ENST00000429762 KCNT1Q5JUK3 1230 aa23.2■■□□□ 1.3
VSX1-205ENST00000429762 GPRIN1Q7Z2K8 1008 aa23.2■■□□□ 1.3
VSX1-205ENST00000429762 TMCO2Q7Z6W1 182 aaPredicted RBP23.2■■□□□ 1.3
VSX1-205ENST00000429762 ZMIZ2Q8NF64 920 aa23.2■■□□□ 1.3
VSX1-205ENST00000429762 NAP1L3Q99457 506 aaPredicted RBP23.2■■□□□ 1.3
VSX1-205ENST00000429762 ACBD6Q9BR61 282 aa23.2■■□□□ 1.3
VSX1-205ENST00000429762 ARGLU1Q9NWB6 273 aaPredicted RBP23.2■■□□□ 1.3
VSX1-205ENST00000429762 ZNF446Q9NWS9 450 aa23.2■■□□□ 1.3
VSX1-205ENST00000429762 AMACRQ9UHK6 382 aa23.2■■□□□ 1.3
VSX1-205ENST00000429762 FNDC1Q4ZHG4 1894 aaPredicted RBP23.19■■□□□ 1.3
VSX1-205ENST00000429762 ESYT3A0FGR9 886 aa23.19■■□□□ 1.3
VSX1-205ENST00000429762 CCDC188H7C350 402 aa23.19■■□□□ 1.3
VSX1-205ENST00000429762 RALAP11233 206 aa23.19■■□□□ 1.3
VSX1-205ENST00000429762 TFE3P19532 575 aaPredicted RBP23.19■■□□□ 1.3
VSX1-205ENST00000429762 RPL34P49207 117 aaKnown RBP23.19■■□□□ 1.3
VSX1-205ENST00000429762 ZNF143P52747 638 aaPredicted RBP23.19■■□□□ 1.3
VSX1-205ENST00000429762 SIX1Q15475 284 aaPredicted RBP23.19■■□□□ 1.3
VSX1-205ENST00000429762 PKN2Q16513 984 aaKnown RBP23.19■■□□□ 1.3
VSX1-205ENST00000429762 CCDC14Q49A88 953 aa23.19■■□□□ 1.3
VSX1-205ENST00000429762 PRELID2Q8N945 189 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms