RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 PTPN1P18031 435 aaKnown RBP12.72□□□□□ -0.37
USF1-203ENST00000368021 TYMPP19971 482 aa12.72□□□□□ -0.37
USF1-203ENST00000368021 PCSK1P29120 753 aa12.72□□□□□ -0.37
USF1-203ENST00000368021 SNX16P57768 344 aa12.72□□□□□ -0.37
USF1-203ENST00000368021 RNASELQ05823 741 aaKnown RBP12.72□□□□□ -0.37
USF1-203ENST00000368021 ITIH3Q06033 890 aa12.72□□□□□ -0.37
USF1-203ENST00000368021 BST2Q10589 180 aaKnown RBP12.72□□□□□ -0.37
USF1-203ENST00000368021 DNAJC24Q6P3W2 148 aa12.72□□□□□ -0.37
USF1-203ENST00000368021 SPRED2Q7Z698 418 aa12.72□□□□□ -0.37
USF1-203ENST00000368021 ZNF280BQ86YH2 543 aa12.72□□□□□ -0.37
USF1-203ENST00000368021 SLC35F5Q8WV83 523 aa12.72□□□□□ -0.37
USF1-203ENST00000368021 CD101Q93033 1021 aa12.72□□□□□ -0.37
USF1-203ENST00000368021 CASD1Q96PB1 797 aa12.72□□□□□ -0.37
USF1-203ENST00000368021 FAM193BQ96PV7 902 aaPredicted RBP12.72□□□□□ -0.37
USF1-203ENST00000368021 RAD9AQ99638 391 aa12.72□□□□□ -0.37
USF1-203ENST00000368021 HNRNPABQ99729 332 aaKnown RBP12.72□□□□□ -0.37
USF1-203ENST00000368021 MRPL9Q9BYD2 267 aaKnown RBP12.72□□□□□ -0.37
USF1-203ENST00000368021 TTYH1Q9H313 450 aaPredicted RBP12.72□□□□□ -0.37
USF1-203ENST00000368021 CXorf56Q9H5V9 222 aa12.72□□□□□ -0.37
USF1-203ENST00000368021 SYNCQ9H7C4 482 aa12.72□□□□□ -0.37
USF1-203ENST00000368021 CYLDQ9NQC7 956 aa12.72□□□□□ -0.37
USF1-203ENST00000368021 DDX43Q9NXZ2 648 aaKnown RBP12.72□□□□□ -0.37
USF1-203ENST00000368021 MTUS1Q9ULD2 1270 aa12.72□□□□□ -0.37
USF1-203ENST00000368021 TSC2P49815 1807 aa12.71□□□□□ -0.37
USF1-203ENST00000368021 VCANP13611 3396 aa12.71□□□□□ -0.37
USF1-203ENST00000368021 SPTBN5Q9NRC6 3674 aaKnown RBP12.71□□□□□ -0.37
USF1-203ENST00000368021 CTAGE15A4D2H0 777 aa12.71□□□□□ -0.38
USF1-203ENST00000368021 TMEM191CA6NGB0 347 aa12.71□□□□□ -0.38
USF1-203ENST00000368021 SIGLEC16A6NMB1 481 aa12.71□□□□□ -0.38
USF1-203ENST00000368021 HCRTO43612 131 aa12.71□□□□□ -0.38
USF1-203ENST00000368021 B4GALT3O60512 393 aa12.71□□□□□ -0.38
USF1-203ENST00000368021 PROSCO94903 275 aa12.71□□□□□ -0.38
USF1-203ENST00000368021 CTAGE8P0CG41 777 aa12.71□□□□□ -0.38
USF1-203ENST00000368021 COMTP21964 271 aa12.71□□□□□ -0.38
USF1-203ENST00000368021 CXCR5P32302 372 aa12.71□□□□□ -0.38
USF1-203ENST00000368021 MAN1A1P33908 653 aa12.71□□□□□ -0.38
USF1-203ENST00000368021 RPL34P49207 117 aaKnown RBP12.71□□□□□ -0.38
USF1-203ENST00000368021 GATMP50440 423 aa12.71□□□□□ -0.38
USF1-203ENST00000368021 RAB30Q15771 203 aa12.71□□□□□ -0.38
USF1-203ENST00000368021 CFAP221Q4G0U5 840 aa12.71□□□□□ -0.38
USF1-203ENST00000368021 ZNF697Q5TEC3 545 aa12.71□□□□□ -0.38
USF1-203ENST00000368021 PPP2R2DQ66LE6 453 aa12.71□□□□□ -0.38
USF1-203ENST00000368021 LLGL2Q6P1M3 1020 aa12.71□□□□□ -0.38
USF1-203ENST00000368021 TMCO3Q6UWJ1 677 aa12.71□□□□□ -0.38
USF1-203ENST00000368021 CTAGE6Q86UF2 777 aa12.71□□□□□ -0.38
USF1-203ENST00000368021 METTL23Q86XA0 190 aa12.71□□□□□ -0.38
USF1-203ENST00000368021 XYLT1Q86Y38 959 aa12.71□□□□□ -0.38
USF1-203ENST00000368021 CTAGE4Q8IX94 777 aa12.71□□□□□ -0.38
USF1-203ENST00000368021 UBL4BQ8N7F7 174 aa12.71□□□□□ -0.38
USF1-203ENST00000368021 UBA3Q8TBC4 463 aa12.71□□□□□ -0.38
USF1-203ENST00000368021 RABGGTAQ92696 567 aa12.71□□□□□ -0.38
USF1-203ENST00000368021 MCRS1Q96EZ8 462 aa12.71□□□□□ -0.38
USF1-203ENST00000368021 PSMB7Q99436 277 aa12.71□□□□□ -0.38
USF1-203ENST00000368021 SLC4A5Q9BY07 1137 aa12.71□□□□□ -0.38
USF1-203ENST00000368021 CARD9Q9H257 536 aa12.71□□□□□ -0.38
USF1-203ENST00000368021 ZNF576Q9H609 170 aa12.71□□□□□ -0.38
USF1-203ENST00000368021 CDH9Q9ULB4 789 aa12.71□□□□□ -0.38
USF1-203ENST00000368021 PCDHA11Q9Y5I1 949 aa12.71□□□□□ -0.38
USF1-203ENST00000368021 PTPRSQ13332 1948 aa12.7□□□□□ -0.38
USF1-203ENST00000368021 DDX3YO15523 660 aaKnown RBP12.7□□□□□ -0.38
USF1-203ENST00000368021 SPOPO43791 374 aa12.7□□□□□ -0.38
USF1-203ENST00000368021 ERBB2P04626 1255 aa12.7□□□□□ -0.38
USF1-203ENST00000368021 CCDC130P13994 396 aa12.7□□□□□ -0.38
USF1-203ENST00000368021 CTNNA1P35221 906 aaKnown RBP12.7□□□□□ -0.38
USF1-203ENST00000368021 PAFAH1B1P43034 410 aa12.7□□□□□ -0.38
USF1-203ENST00000368021 PSMC1P62191 440 aaKnown RBP12.7□□□□□ -0.38
USF1-203ENST00000368021 PLCB3Q01970 1234 aa12.7□□□□□ -0.38
USF1-203ENST00000368021 ZKSCAN8Q15776 578 aaPredicted RBP12.7□□□□□ -0.38
USF1-203ENST00000368021 CYP4A22Q5TCH4 519 aa12.7□□□□□ -0.38
USF1-203ENST00000368021 CCDC181Q5TID7 509 aa12.7□□□□□ -0.38
USF1-203ENST00000368021 RSRC2Q7L4I2 434 aaKnown RBP12.7□□□□□ -0.38
USF1-203ENST00000368021 TMEM110Q86TL2 294 aa12.7□□□□□ -0.38
USF1-203ENST00000368021 LRRN4CLQ8ND94 238 aa12.7□□□□□ -0.38
USF1-203ENST00000368021 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.7□□□□□ -0.38
USF1-203ENST00000368021 SLC2A14Q8TDB8 520 aa12.7□□□□□ -0.38
USF1-203ENST00000368021 FNIP1Q8TF40 1166 aa12.7□□□□□ -0.38
USF1-203ENST00000368021 BTBD6Q96KE9 485 aa12.7□□□□□ -0.38
USF1-203ENST00000368021 CAPZA3Q96KX2 299 aa12.7□□□□□ -0.38
USF1-203ENST00000368021 SYT15Q9BQS2 421 aa12.7□□□□□ -0.38
USF1-203ENST00000368021 ACBD6Q9BR61 282 aa12.7□□□□□ -0.38
USF1-203ENST00000368021 SELENOOQ9BVL4 669 aa12.7□□□□□ -0.38
USF1-203ENST00000368021 TRIM7Q9C029 511 aa12.7□□□□□ -0.38
USF1-203ENST00000368021 IP6K2Q9UHH9 426 aa12.7□□□□□ -0.38
USF1-203ENST00000368021 RRP15Q9Y3B9 282 aaKnown RBP12.7□□□□□ -0.38
USF1-203ENST00000368021 INSL6Q9Y581 213 aa12.7□□□□□ -0.38
USF1-203ENST00000368021 GBF1Q92538 1859 aa12.7□□□□□ -0.38
USF1-203ENST00000368021 TMEM110-MUSTN1A8MSY1 372 aa12.69□□□□□ -0.38
USF1-203ENST00000368021 TRAPPC3O43617 180 aa12.69□□□□□ -0.38
USF1-203ENST00000368021 ITGB1P05556 798 aa12.69□□□□□ -0.38
USF1-203ENST00000368021 KRT3P12035 628 aa12.69□□□□□ -0.38
USF1-203ENST00000368021 CTNNA2P26232 953 aa12.69□□□□□ -0.38
USF1-203ENST00000368021 BRCC3P46736 316 aa12.69□□□□□ -0.38
USF1-203ENST00000368021 PLA2G4AP47712 749 aa12.69□□□□□ -0.38
USF1-203ENST00000368021 SLC8A3P57103 927 aa12.69□□□□□ -0.38
USF1-203ENST00000368021 RPL7AP62424 266 aaKnown RBP12.69□□□□□ -0.38
USF1-203ENST00000368021 PAN2Q504Q3 1202 aaKnown RBP12.69□□□□□ -0.38
USF1-203ENST00000368021 PMF1Q6P1K2 205 aa12.69□□□□□ -0.38
USF1-203ENST00000368021 DCUN1D2Q6PH85 259 aa12.69□□□□□ -0.38
USF1-203ENST00000368021 PHLDB2Q86SQ0 1253 aa12.69□□□□□ -0.38
USF1-203ENST00000368021 ZDHHC17Q8IUH5 632 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms