RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 A0A1W2PPM1 405 aa16.59■□□□□ 0.25
CLSTN1-201ENST00000361311 KBTBD13C9JR72 458 aa16.59■□□□□ 0.25
CLSTN1-201ENST00000361311 H0YGN5 161 aa16.59■□□□□ 0.25
CLSTN1-201ENST00000361311 SH3BP5O60239 455 aa16.59■□□□□ 0.25
CLSTN1-201ENST00000361311 SLC5A9Q2M3M2 681 aa16.59■□□□□ 0.25
CLSTN1-201ENST00000361311 ZNF568Q3ZCX4 644 aa16.59■□□□□ 0.25
CLSTN1-201ENST00000361311 AGAP3Q96P47 875 aa16.59■□□□□ 0.25
CLSTN1-201ENST00000361311 NRDE2Q9H7Z3 1164 aa16.59■□□□□ 0.25
CLSTN1-201ENST00000361311 TMCO1Q9UM00 188 aa16.59■□□□□ 0.25
CLSTN1-201ENST00000361311 ATP11BQ9Y2G3 1177 aa16.59■□□□□ 0.25
CLSTN1-201ENST00000361311 NFS1Q9Y697 457 aa16.59■□□□□ 0.25
CLSTN1-201ENST00000361311 MAP3K6O95382 1288 aa16.59■□□□□ 0.25
CLSTN1-201ENST00000361311 RALBP11234 206 aa16.59■□□□□ 0.25
CLSTN1-201ENST00000361311 GRK2P25098 689 aa16.59■□□□□ 0.25
CLSTN1-201ENST00000361311 TRPC1P48995 793 aa16.59■□□□□ 0.25
CLSTN1-201ENST00000361311 NEK2P51955 445 aa16.59■□□□□ 0.25
CLSTN1-201ENST00000361311 NCKAP1LP55160 1127 aa16.59■□□□□ 0.25
CLSTN1-201ENST00000361311 PPATQ06203 517 aa16.59■□□□□ 0.25
CLSTN1-201ENST00000361311 CIAPIN1Q6FI81 312 aa16.59■□□□□ 0.25
CLSTN1-201ENST00000361311 ZCCHC23Q6ZST2 131 aa16.59■□□□□ 0.25
CLSTN1-201ENST00000361311 SMIM5Q71RC9 77 aa16.59■□□□□ 0.25
CLSTN1-201ENST00000361311 ELMO3Q96BJ8 720 aa16.59■□□□□ 0.25
CLSTN1-201ENST00000361311 CNDP1Q96KN2 507 aa16.59■□□□□ 0.25
CLSTN1-201ENST00000361311 EIF2AQ9BY44 585 aaKnown RBP16.59■□□□□ 0.25
CLSTN1-201ENST00000361311 GRHL1Q9NZI5 618 aa16.59■□□□□ 0.25
CLSTN1-201ENST00000361311 SEPT3Q9UH03 358 aa16.59■□□□□ 0.25
CLSTN1-201ENST00000361311 TCRBV7S2A1N4TA0A589 114 aa16.59■□□□□ 0.25
CLSTN1-201ENST00000361311 CHEK2O96017 543 aa16.59■□□□□ 0.25
CLSTN1-201ENST00000361311 HABP4Q5JVS0 413 aaKnown RBP16.59■□□□□ 0.25
CLSTN1-201ENST00000361311 TSHZ1Q6ZSZ6 1077 aa16.59■□□□□ 0.25
CLSTN1-201ENST00000361311 SLFN11Q7Z7L1 901 aa16.59■□□□□ 0.25
CLSTN1-201ENST00000361311 NIM1KQ8IY84 436 aa16.59■□□□□ 0.25
CLSTN1-201ENST00000361311 OR6B3Q8NGW1 331 aa16.59■□□□□ 0.25
CLSTN1-201ENST00000361311 ZNF341Q9BYN7 854 aa16.59■□□□□ 0.25
CLSTN1-201ENST00000361311 FEM1BQ9UK73 627 aa16.59■□□□□ 0.25
CLSTN1-201ENST00000361311 ANO7Q6IWH7 933 aa16.58■□□□□ 0.25
CLSTN1-201ENST00000361311 ULK2Q8IYT8 1036 aa16.58■□□□□ 0.25
CLSTN1-201ENST00000361311 CYP2W1Q8TAV3 490 aa16.58■□□□□ 0.25
CLSTN1-201ENST00000361311 UCMAQ8WVF2 138 aa16.58■□□□□ 0.25
CLSTN1-201ENST00000361311 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.58■□□□□ 0.25
CLSTN1-201ENST00000361311 DDX28Q9NUL7 540 aaKnown RBP16.58■□□□□ 0.25
CLSTN1-201ENST00000361311 TMEM59LQ9UK28 342 aa16.58■□□□□ 0.25
CLSTN1-201ENST00000361311 MYH8P13535 1937 aa16.58■□□□□ 0.25
CLSTN1-201ENST00000361311 NID2Q14112 1375 aa16.58■□□□□ 0.25
CLSTN1-201ENST00000361311 EME2A4GXA9 379 aaPredicted RBP16.58■□□□□ 0.25
CLSTN1-201ENST00000361311 ZC3H11AO75152 810 aaKnown RBP eCLIP16.58■□□□□ 0.25
CLSTN1-201ENST00000361311 ETS1P14921 441 aa16.58■□□□□ 0.25
CLSTN1-201ENST00000361311 YWHAHQ04917 246 aaPredicted RBP16.58■□□□□ 0.25
CLSTN1-201ENST00000361311 PPP3CAQ08209 521 aa16.58■□□□□ 0.25
CLSTN1-201ENST00000361311 NFIXQ14938 502 aa16.58■□□□□ 0.25
CLSTN1-201ENST00000361311 RBM44Q6ZP01 1051 aaKnown RBP16.58■□□□□ 0.25
CLSTN1-201ENST00000361311 C10orf88Q9H8K7 445 aa16.58■□□□□ 0.25
CLSTN1-201ENST00000361311 GRAP2O75791 330 aa16.58■□□□□ 0.24
CLSTN1-201ENST00000361311 SERPINB10P48595 397 aa16.58■□□□□ 0.24
CLSTN1-201ENST00000361311 PRKG1Q13976 671 aa16.58■□□□□ 0.24
CLSTN1-201ENST00000361311 ECM1Q16610 540 aa16.58■□□□□ 0.24
CLSTN1-201ENST00000361311 SIX6OS1Q8N1H7 587 aa16.58■□□□□ 0.24
CLSTN1-201ENST00000361311 KLHL23Q8NBE8 558 aa16.58■□□□□ 0.24
CLSTN1-201ENST00000361311 FAXDC2Q96IV6 333 aa16.58■□□□□ 0.24
CLSTN1-201ENST00000361311 CEP19Q96LK0 163 aa16.58■□□□□ 0.24
CLSTN1-201ENST00000361311 MXRA8Q9BRK3 442 aa16.58■□□□□ 0.24
CLSTN1-201ENST00000361311 TMEM79Q9BSE2 394 aa16.58■□□□□ 0.24
CLSTN1-201ENST00000361311 ZDHHC18Q9NUE0 388 aa16.58■□□□□ 0.24
CLSTN1-201ENST00000361311 DCDC2Q9UHG0 476 aa16.58■□□□□ 0.24
CLSTN1-201ENST00000361311 PLEKHA7Q6IQ23 1121 aa16.58■□□□□ 0.24
CLSTN1-201ENST00000361311 LRP10Q7Z4F1 713 aa16.58■□□□□ 0.24
CLSTN1-201ENST00000361311 KYQ8NBH2 561 aa16.58■□□□□ 0.24
CLSTN1-201ENST00000361311 ZNF408Q9H9D4 720 aa16.58■□□□□ 0.24
CLSTN1-201ENST00000361311 C1orf167Q5SNV9 1468 aa16.58■□□□□ 0.24
CLSTN1-201ENST00000361311 IGSF9BQ9UPX0 1349 aa16.57■□□□□ 0.24
CLSTN1-201ENST00000361311 ANGPT2O15123 496 aa16.57■□□□□ 0.24
CLSTN1-201ENST00000361311 CYP1A2P05177 515 aa16.57■□□□□ 0.24
CLSTN1-201ENST00000361311 SLC1A5Q15758 541 aa16.57■□□□□ 0.24
CLSTN1-201ENST00000361311 ZDHHC24Q6UX98 284 aa16.57■□□□□ 0.24
CLSTN1-201ENST00000361311 RNF148Q8N7C7 305 aa16.57■□□□□ 0.24
CLSTN1-201ENST00000361311 GJD4Q96KN9 370 aaPredicted RBP16.57■□□□□ 0.24
CLSTN1-201ENST00000361311 C16orf96A6NNT2 1141 aa16.57■□□□□ 0.24
CLSTN1-201ENST00000361311 EXTL3O43909 919 aa16.57■□□□□ 0.24
CLSTN1-201ENST00000361311 PEX11AO75192 247 aa16.57■□□□□ 0.24
CLSTN1-201ENST00000361311 SRP72O76094 671 aaKnown RBP16.57■□□□□ 0.24
CLSTN1-201ENST00000361311 USP10Q14694 798 aaKnown RBP16.57■□□□□ 0.24
CLSTN1-201ENST00000361311 EMC10Q5UCC4 262 aa16.57■□□□□ 0.24
CLSTN1-201ENST00000361311 ZBTB49Q6ZSB9 765 aa16.57■□□□□ 0.24
CLSTN1-201ENST00000361311 CLVS1Q8IUQ0 354 aaPredicted RBP16.57■□□□□ 0.24
CLSTN1-201ENST00000361311 TMC2Q8TDI7 906 aa16.57■□□□□ 0.24
CLSTN1-201ENST00000361311 CASP10Q92851 521 aa16.57■□□□□ 0.24
CLSTN1-201ENST00000361311 DGCR14Q96DF8 476 aaKnown RBP16.57■□□□□ 0.24
CLSTN1-201ENST00000361311 CCDC28BQ9BUN5 200 aa16.57■□□□□ 0.24
CLSTN1-201ENST00000361311 KCNH7Q9NS40 1196 aa16.57■□□□□ 0.24
CLSTN1-201ENST00000361311 ANKRD63C9JTQ0 380 aa16.57■□□□□ 0.24
CLSTN1-201ENST00000361311 DAB1O75553 588 aa16.57■□□□□ 0.24
CLSTN1-201ENST00000361311 USP1O94782 785 aa16.57■□□□□ 0.24
CLSTN1-201ENST00000361311 PAMP19021 973 aa16.57■□□□□ 0.24
CLSTN1-201ENST00000361311 SGSM1Q2NKQ1 1148 aa16.57■□□□□ 0.24
CLSTN1-201ENST00000361311 KBTBD12Q3ZCT8 623 aa16.57■□□□□ 0.24
CLSTN1-201ENST00000361311 MYLK4Q86YV6 388 aaPredicted RBP16.57■□□□□ 0.24
CLSTN1-201ENST00000361311 KATNAL2Q8IYT4 538 aa16.57■□□□□ 0.24
CLSTN1-201ENST00000361311 PCYOX1LQ8NBM8 494 aa16.57■□□□□ 0.24
CLSTN1-201ENST00000361311 RFWD2Q8NHY2 731 aa16.57■□□□□ 0.24
CLSTN1-201ENST00000361311 UMODL1Q5DID0 1318 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms