RNA–Protein interactions for RNA: ENST00000360093.7

SCN3A-202, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN3A, Length 9,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-202ENST00000360093 CELF3Q5SZQ8 465 aaKnown RBP5.05□□□□□ -1.6
SCN3A-202ENST00000360093 ACOT1Q86TX2 421 aa5.05□□□□□ -1.6
SCN3A-202ENST00000360093 ST13P4Q8IZP2 240 aaPredicted RBP5.05□□□□□ -1.6
SCN3A-202ENST00000360093 MTMR9Q96QG7 549 aa5.05□□□□□ -1.6
SCN3A-202ENST00000360093 P2RX7Q99572 595 aaKnown RBP5.05□□□□□ -1.6
SCN3A-202ENST00000360093 ENTPD7Q9NQZ7 604 aa5.05□□□□□ -1.6
SCN3A-202ENST00000360093 TRIM66O15016 1216 aa5.05□□□□□ -1.6
SCN3A-202ENST00000360093 ANGPT2O15123 496 aa5.05□□□□□ -1.6
SCN3A-202ENST00000360093 RAD51CO43502 376 aa5.05□□□□□ -1.6
SCN3A-202ENST00000360093 PROSCO94903 275 aa5.05□□□□□ -1.6
SCN3A-202ENST00000360093 CRTAMO95727 393 aa5.05□□□□□ -1.6
SCN3A-202ENST00000360093 CD44P16070 742 aaKnown RBP5.05□□□□□ -1.6
SCN3A-202ENST00000360093 ACO1P21399 889 aaKnown RBP5.05□□□□□ -1.6
SCN3A-202ENST00000360093 EIF4BP23588 611 aaKnown RBP5.05□□□□□ -1.6
SCN3A-202ENST00000360093 WASHC5Q12768 1159 aa5.05□□□□□ -1.6
SCN3A-202ENST00000360093 CCNG2Q16589 344 aa5.05□□□□□ -1.6
SCN3A-202ENST00000360093 PAPD7Q5XG87 772 aaKnown RBP5.05□□□□□ -1.6
SCN3A-202ENST00000360093 ANKMY2Q8IV38 441 aa5.05□□□□□ -1.6
SCN3A-202ENST00000360093 BRSK2Q8IWQ3 736 aa5.05□□□□□ -1.6
SCN3A-202ENST00000360093 ABRAQ8N0Z2 381 aa5.05□□□□□ -1.6
SCN3A-202ENST00000360093 ELMO2Q96JJ3 720 aa5.05□□□□□ -1.6
SCN3A-202ENST00000360093 SLC7A5P2Q9GIP4 190 aa5.05□□□□□ -1.6
SCN3A-202ENST00000360093 RIC8BQ9NVN3 520 aa5.05□□□□□ -1.6
SCN3A-202ENST00000360093 PSD3Q9NYI0 1048 aa5.05□□□□□ -1.6
SCN3A-202ENST00000360093 VIRMAQ69YN4 1812 aaKnown RBP5.05□□□□□ -1.6
SCN3A-202ENST00000360093 A0A087X0T9 212 aa5.05□□□□□ -1.6
SCN3A-202ENST00000360093 GRAP2O75791 330 aa5.05□□□□□ -1.6
SCN3A-202ENST00000360093 PPP1R37O75864 691 aa5.05□□□□□ -1.6
SCN3A-202ENST00000360093 SGPL1O95470 568 aa5.05□□□□□ -1.6
SCN3A-202ENST00000360093 ASMTLO95671 621 aa5.05□□□□□ -1.6
SCN3A-202ENST00000360093 FAM228BP0C875 321 aa5.05□□□□□ -1.6
SCN3A-202ENST00000360093 TUFMP49411 452 aaKnown RBP5.05□□□□□ -1.6
SCN3A-202ENST00000360093 ITGA8P53708 1063 aa5.05□□□□□ -1.6
SCN3A-202ENST00000360093 RTP1P59025 263 aa5.05□□□□□ -1.6
SCN3A-202ENST00000360093 VSNL1P62760 191 aa5.05□□□□□ -1.6
SCN3A-202ENST00000360093 C1orf146Q5VVC0 180 aa5.05□□□□□ -1.6
SCN3A-202ENST00000360093 POTEAQ6S8J7 498 aa5.05□□□□□ -1.6
SCN3A-202ENST00000360093 NLRP9Q7RTR0 991 aa5.05□□□□□ -1.6
SCN3A-202ENST00000360093 SPATA21Q7Z572 469 aa5.05□□□□□ -1.6
SCN3A-202ENST00000360093 MRPL1Q9BYD6 325 aaKnown RBP5.05□□□□□ -1.6
SCN3A-202ENST00000360093 TASP1Q9H6P5 420 aa5.05□□□□□ -1.6
SCN3A-202ENST00000360093 AVENQ9NQS1 362 aaPredicted RBP5.05□□□□□ -1.6
SCN3A-202ENST00000360093 KLHL11Q9NVR0 708 aa5.05□□□□□ -1.6
SCN3A-202ENST00000360093 KLK14Q9P0G3 267 aa5.05□□□□□ -1.6
SCN3A-202ENST00000360093 FAM198AQ9UFP1 575 aa5.05□□□□□ -1.6
SCN3A-202ENST00000360093 COL1A2P08123 1366 aa5.05□□□□□ -1.6
SCN3A-202ENST00000360093 SDR42E2A6NKP2 422 aa5.05□□□□□ -1.6
SCN3A-202ENST00000360093 HNRNPRO43390 633 aaKnown RBP5.05□□□□□ -1.6
SCN3A-202ENST00000360093 SOAT2O75908 522 aa5.05□□□□□ -1.6
SCN3A-202ENST00000360093 EEF1B2P24534 225 aaKnown RBP5.05□□□□□ -1.6
SCN3A-202ENST00000360093 MRPS25P82663 173 aaKnown RBP5.05□□□□□ -1.6
SCN3A-202ENST00000360093 AASDHQ4L235 1098 aaPredicted RBP5.05□□□□□ -1.6
SCN3A-202ENST00000360093 C16orf89Q6UX73 402 aa5.05□□□□□ -1.6
SCN3A-202ENST00000360093 ANO5Q75V66 913 aa5.05□□□□□ -1.6
SCN3A-202ENST00000360093 VPS37AQ8NEZ2 397 aa5.05□□□□□ -1.6
SCN3A-202ENST00000360093 PIP4K2CQ8TBX8 421 aa5.05□□□□□ -1.6
SCN3A-202ENST00000360093 INTS13Q9NVM9 706 aa5.05□□□□□ -1.6
SCN3A-202ENST00000360093 CYP39A1Q9NYL5 469 aa5.05□□□□□ -1.6
SCN3A-202ENST00000360093 DISP2A7MBM2 1401 aa5.05□□□□□ -1.6
SCN3A-202ENST00000360093 ZNF286BP0CG31 522 aa5.05□□□□□ -1.6
SCN3A-202ENST00000360093 VCLP18206 1134 aa5.05□□□□□ -1.6
SCN3A-202ENST00000360093 CCR1P32246 355 aa5.05□□□□□ -1.6
SCN3A-202ENST00000360093 CASP4P49662 377 aa5.05□□□□□ -1.6
SCN3A-202ENST00000360093 RARS2Q5T160 578 aaKnown RBP5.05□□□□□ -1.6
SCN3A-202ENST00000360093 NYAP1Q6ZVC0 841 aa5.05□□□□□ -1.6
SCN3A-202ENST00000360093 SUGP1Q8IWZ8 645 aaKnown RBP5.05□□□□□ -1.6
SCN3A-202ENST00000360093 STAMBPL1Q96FJ0 436 aa5.05□□□□□ -1.6
SCN3A-202ENST00000360093 CPB2Q96IY4 423 aa5.05□□□□□ -1.6
SCN3A-202ENST00000360093 LATS2Q9NRM7 1088 aa5.05□□□□□ -1.6
SCN3A-202ENST00000360093 SETD4Q9NVD3 440 aa5.05□□□□□ -1.6
SCN3A-202ENST00000360093 TBC1D13Q9NVG8 400 aa5.05□□□□□ -1.6
SCN3A-202ENST00000360093 SCAF8Q9UPN6 1271 aaKnown RBP5.05□□□□□ -1.6
SCN3A-202ENST00000360093 PRPF4O43172 522 aaKnown RBP eCLIP5.04□□□□□ -1.6
SCN3A-202ENST00000360093 CLASP2O75122 1294 aaKnown RBP5.04□□□□□ -1.6
SCN3A-202ENST00000360093 HMBSP08397 361 aa5.04□□□□□ -1.6
SCN3A-202ENST00000360093 MED21Q13503 144 aa5.04□□□□□ -1.6
SCN3A-202ENST00000360093 HIC1Q14526 733 aa5.04□□□□□ -1.6
SCN3A-202ENST00000360093 TATDN1Q6P1N9 297 aa5.04□□□□□ -1.6
SCN3A-202ENST00000360093 LRRC6Q86X45 466 aa5.04□□□□□ -1.6
SCN3A-202ENST00000360093 KIAA0895Q8NCT3 520 aa5.04□□□□□ -1.6
SCN3A-202ENST00000360093 SRPK1Q96SB4 655 aaKnown RBP5.04□□□□□ -1.6
SCN3A-202ENST00000360093 TINF2Q9BSI4 451 aa5.04□□□□□ -1.6
SCN3A-202ENST00000360093 PABPC3Q9H361 631 aaKnown RBP5.04□□□□□ -1.6
SCN3A-202ENST00000360093 LRRC40Q9H9A6 602 aa5.04□□□□□ -1.6
SCN3A-202ENST00000360093 A1CFQ9NQ94 594 aaKnown RBP5.04□□□□□ -1.6
SCN3A-202ENST00000360093 ADA2Q9NZK5 511 aa5.04□□□□□ -1.6
SCN3A-202ENST00000360093 PRG3Q9Y2Y8 225 aaPredicted RBP5.04□□□□□ -1.6
SCN3A-202ENST00000360093 PCDHB5Q9Y5E4 795 aa5.04□□□□□ -1.6
SCN3A-202ENST00000360093 IRF1P10914 325 aa5.04□□□□□ -1.6
SCN3A-202ENST00000360093 KCNA2P16389 499 aa5.04□□□□□ -1.6
SCN3A-202ENST00000360093 CYP2C18P33260 490 aa5.04□□□□□ -1.6
SCN3A-202ENST00000360093 CTCFP49711 727 aaPredicted RBP5.04□□□□□ -1.6
SCN3A-202ENST00000360093 ITGA9Q13797 1035 aa5.04□□□□□ -1.6
SCN3A-202ENST00000360093 PTGISQ16647 500 aa5.04□□□□□ -1.6
SCN3A-202ENST00000360093 SMTNL2Q2TAL5 461 aa5.04□□□□□ -1.6
SCN3A-202ENST00000360093 GRAMD1BQ3KR37 738 aa5.04□□□□□ -1.6
SCN3A-202ENST00000360093 HABP4Q5JVS0 413 aaKnown RBP5.04□□□□□ -1.6
SCN3A-202ENST00000360093 ANKRD23Q86SG2 305 aa5.04□□□□□ -1.6
SCN3A-202ENST00000360093 IPMKQ8NFU5 416 aa5.04□□□□□ -1.6
SCN3A-202ENST00000360093 TAS1R2Q8TE23 839 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms