RNA–Protein interactions for RNA: ENST00000359052.8

SMARCAD1-202, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best)

Gene SMARCAD1, Length 5,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-202ENST00000359052 RB1P06400 928 aa2.1□□□□□ -2.07
SMARCAD1-202ENST00000359052 BMP8BP34820 402 aa2.1□□□□□ -2.07
SMARCAD1-202ENST00000359052 MLH1P40692 756 aa2.1□□□□□ -2.07
SMARCAD1-202ENST00000359052 KHDRBS1Q07666 443 aaKnown RBP eCLIP2.1□□□□□ -2.07
SMARCAD1-202ENST00000359052 ARID5BQ14865 1188 aa2.1□□□□□ -2.07
SMARCAD1-202ENST00000359052 CRY2Q49AN0 593 aa2.1□□□□□ -2.07
SMARCAD1-202ENST00000359052 WIPI1Q5MNZ9 446 aaPredicted RBP2.1□□□□□ -2.07
SMARCAD1-202ENST00000359052 BORAQ6PGQ7 559 aa2.1□□□□□ -2.07
SMARCAD1-202ENST00000359052 ISL2Q96A47 359 aa2.1□□□□□ -2.07
SMARCAD1-202ENST00000359052 ZNF837Q96EG3 531 aaPredicted RBP2.1□□□□□ -2.07
SMARCAD1-202ENST00000359052 MED15Q96RN5 788 aa2.1□□□□□ -2.07
SMARCAD1-202ENST00000359052 ERVMER34-1Q9H9K5 563 aa2.1□□□□□ -2.07
SMARCAD1-202ENST00000359052 TLK1Q9UKI8 766 aa2.1□□□□□ -2.07
SMARCAD1-202ENST00000359052 MTUS2Q5JR59 1369 aa2.1□□□□□ -2.07
SMARCAD1-202ENST00000359052 WDR81Q562E7 1941 aa2.1□□□□□ -2.07
SMARCAD1-202ENST00000359052 OR2A25A4D2G3 310 aa2.1□□□□□ -2.07
SMARCAD1-202ENST00000359052 CAPN8A6NHC0 703 aa2.1□□□□□ -2.07
SMARCAD1-202ENST00000359052 AKR1B10O60218 316 aa2.1□□□□□ -2.07
SMARCAD1-202ENST00000359052 B4GALT4O60513 344 aa2.1□□□□□ -2.07
SMARCAD1-202ENST00000359052 TNFRSF6BO95407 300 aa2.1□□□□□ -2.07
SMARCAD1-202ENST00000359052 BAG2O95816 211 aa2.1□□□□□ -2.07
SMARCAD1-202ENST00000359052 SLC4A1P02730 911 aa2.1□□□□□ -2.07
SMARCAD1-202ENST00000359052 EEF2P13639 858 aaKnown RBP2.1□□□□□ -2.07
SMARCAD1-202ENST00000359052 RFC4P35249 363 aa2.1□□□□□ -2.07
SMARCAD1-202ENST00000359052 SCNN1BP51168 640 aa2.1□□□□□ -2.07
SMARCAD1-202ENST00000359052 CCNA1P78396 465 aa2.1□□□□□ -2.07
SMARCAD1-202ENST00000359052 PCOLCEQ15113 449 aa2.1□□□□□ -2.07
SMARCAD1-202ENST00000359052 LLGL1Q15334 1064 aa2.1□□□□□ -2.07
SMARCAD1-202ENST00000359052 CFAP100Q494V2 611 aa2.1□□□□□ -2.07
SMARCAD1-202ENST00000359052 PLEKHS1Q5SXH7 462 aa2.1□□□□□ -2.07
SMARCAD1-202ENST00000359052 SHEQ5VZ18 495 aa2.1□□□□□ -2.07
SMARCAD1-202ENST00000359052 ANO7Q6IWH7 933 aa2.1□□□□□ -2.07
SMARCAD1-202ENST00000359052 GAREM2Q75VX8 874 aa2.1□□□□□ -2.07
SMARCAD1-202ENST00000359052 USP38Q8NB14 1042 aa2.1□□□□□ -2.07
SMARCAD1-202ENST00000359052 DTWD2Q8NBA8 298 aa2.1□□□□□ -2.07
SMARCAD1-202ENST00000359052 WHAMMQ8TF30 809 aa2.1□□□□□ -2.07
SMARCAD1-202ENST00000359052 SLC22A18Q96BI1 424 aa2.1□□□□□ -2.07
SMARCAD1-202ENST00000359052 FAM46AQ96IP4 442 aaKnown RBP2.1□□□□□ -2.07
SMARCAD1-202ENST00000359052 FAM227BQ96M60 508 aa2.1□□□□□ -2.07
SMARCAD1-202ENST00000359052 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP2.1□□□□□ -2.07
SMARCAD1-202ENST00000359052 ERVK-5Q9HDB9 667 aa2.1□□□□□ -2.07
SMARCAD1-202ENST00000359052 IFT80Q9P2H3 777 aaPredicted RBP2.1□□□□□ -2.07
SMARCAD1-202ENST00000359052 BTBD3Q9Y2F9 522 aa2.1□□□□□ -2.07
SMARCAD1-202ENST00000359052 ZBTB32Q9Y2Y4 487 aaPredicted RBP2.1□□□□□ -2.07
SMARCAD1-202ENST00000359052 CFAP20Q9Y6A4 193 aaKnown RBP2.1□□□□□ -2.07
SMARCAD1-202ENST00000359052 SCN4AP35499 1836 aa2.1□□□□□ -2.07
SMARCAD1-202ENST00000359052 PTPRCP08575 1304 aa2.1□□□□□ -2.07
SMARCAD1-202ENST00000359052 CEP350Q5VT06 3117 aa2.1□□□□□ -2.07
SMARCAD1-202ENST00000359052 TARM1B6A8C7 271 aa2.1□□□□□ -2.07
SMARCAD1-202ENST00000359052 DNM1LO00429 736 aa2.1□□□□□ -2.07
SMARCAD1-202ENST00000359052 IFIT2P09913 472 aaKnown RBP2.1□□□□□ -2.07
SMARCAD1-202ENST00000359052 CYP2A6P11509 494 aaPredicted RBP2.1□□□□□ -2.07
SMARCAD1-202ENST00000359052 MLLT6P55198 1093 aaPredicted RBP2.1□□□□□ -2.07
SMARCAD1-202ENST00000359052 SLC26A5P58743 744 aa2.1□□□□□ -2.07
SMARCAD1-202ENST00000359052 ZFP36L1Q07352 338 aaKnown RBP2.1□□□□□ -2.07
SMARCAD1-202ENST00000359052 ERMARDQ5T6L9 678 aa2.1□□□□□ -2.07
SMARCAD1-202ENST00000359052 ZNF765Q7L2R6 523 aa2.1□□□□□ -2.07
SMARCAD1-202ENST00000359052 TMC3Q7Z5M5 1100 aa2.1□□□□□ -2.07
SMARCAD1-202ENST00000359052 ABRAQ8N0Z2 381 aa2.1□□□□□ -2.07
SMARCAD1-202ENST00000359052 FBXO15Q8NCQ5 510 aaPredicted RBP2.1□□□□□ -2.07
SMARCAD1-202ENST00000359052 BEND2Q8NDZ0 799 aa2.1□□□□□ -2.07
SMARCAD1-202ENST00000359052 VPS37AQ8NEZ2 397 aa2.1□□□□□ -2.07
SMARCAD1-202ENST00000359052 PHOSPHO1Q8TCT1 267 aa2.1□□□□□ -2.07
SMARCAD1-202ENST00000359052 ASIC4Q96FT7 647 aa2.1□□□□□ -2.07
SMARCAD1-202ENST00000359052 MASTLQ96GX5 879 aa2.1□□□□□ -2.07
SMARCAD1-202ENST00000359052 HHIPL1Q96JK4 782 aa2.1□□□□□ -2.07
SMARCAD1-202ENST00000359052 EGLN2Q96KS0 407 aa2.1□□□□□ -2.07
SMARCAD1-202ENST00000359052 FOXB1Q99853 325 aa2.1□□□□□ -2.07
SMARCAD1-202ENST00000359052 TRIM7Q9C029 511 aa2.1□□□□□ -2.07
SMARCAD1-202ENST00000359052 GJB4Q9NTQ9 266 aa2.1□□□□□ -2.07
SMARCAD1-202ENST00000359052 MRPS18AQ9NVS2 196 aaKnown RBP2.1□□□□□ -2.07
SMARCAD1-202ENST00000359052 NIPSNAP3AQ9UFN0 247 aaPredicted RBP2.1□□□□□ -2.07
SMARCAD1-202ENST00000359052 SEC63Q9UGP8 760 aaKnown RBP2.1□□□□□ -2.07
SMARCAD1-202ENST00000359052 TRPS1Q9UHF7 1281 aa2.1□□□□□ -2.07
SMARCAD1-202ENST00000359052 SLC6A14Q9UN76 642 aa2.1□□□□□ -2.07
SMARCAD1-202ENST00000359052 XIRP2A4UGR9 3374 aa2.1□□□□□ -2.07
SMARCAD1-202ENST00000359052 TRANK1O15050 2925 aa2.1□□□□□ -2.07
SMARCAD1-202ENST00000359052 PNPLA6Q8IY17 1366 aa2.1□□□□□ -2.07
SMARCAD1-202ENST00000359052 A0A1B0GWJ7 208 aa2.1□□□□□ -2.07
SMARCAD1-202ENST00000359052 INO80B-WBP1J3KQ70 363 aa2.1□□□□□ -2.07
SMARCAD1-202ENST00000359052 AQP7O14520 342 aa2.1□□□□□ -2.07
SMARCAD1-202ENST00000359052 NPHS1O60500 1241 aa2.1□□□□□ -2.07
SMARCAD1-202ENST00000359052 PIAS2O75928 621 aa2.1□□□□□ -2.07
SMARCAD1-202ENST00000359052 PRAMEF1O95521 474 aa2.1□□□□□ -2.07
SMARCAD1-202ENST00000359052 MYBL2P10244 700 aa2.1□□□□□ -2.07
SMARCAD1-202ENST00000359052 VAV1P15498 845 aa2.1□□□□□ -2.07
SMARCAD1-202ENST00000359052 IL15P40933 162 aaPredicted RBP2.1□□□□□ -2.07
SMARCAD1-202ENST00000359052 WNT5AP41221 380 aa2.1□□□□□ -2.07
SMARCAD1-202ENST00000359052 METAP1P53582 386 aa2.1□□□□□ -2.07
SMARCAD1-202ENST00000359052 PTTG1IPP53801 180 aa2.1□□□□□ -2.07
SMARCAD1-202ENST00000359052 OAZ1P54368 228 aa2.1□□□□□ -2.07
SMARCAD1-202ENST00000359052 CASP6P55212 293 aa2.1□□□□□ -2.07
SMARCAD1-202ENST00000359052 RBP5P82980 135 aa2.1□□□□□ -2.07
SMARCAD1-202ENST00000359052 CREB5Q02930 508 aa2.1□□□□□ -2.07
SMARCAD1-202ENST00000359052 PPA1Q15181 289 aa2.1□□□□□ -2.07
SMARCAD1-202ENST00000359052 HYAL4Q2M3T9 481 aa2.1□□□□□ -2.07
SMARCAD1-202ENST00000359052 CCDC178Q5BJE1 867 aa2.1□□□□□ -2.07
SMARCAD1-202ENST00000359052 EXOSC6Q5RKV6 272 aaKnown RBP2.1□□□□□ -2.07
SMARCAD1-202ENST00000359052 CENPPQ6IPU0 288 aa2.1□□□□□ -2.07
SMARCAD1-202ENST00000359052 MTFR2Q6P444 385 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms