RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 FKBP1CQ5VVH2 108 aa17.74■□□□□ 0.43
TRAPPC11-201ENST00000334690 MSL3Q8N5Y2 521 aaKnown RBP17.74■□□□□ 0.43
TRAPPC11-201ENST00000334690 CERKQ8TCT0 537 aa17.74■□□□□ 0.43
TRAPPC11-201ENST00000334690 DCLK3Q9C098 648 aa17.74■□□□□ 0.43
TRAPPC11-201ENST00000334690 ZBTB22O15209 634 aa17.74■□□□□ 0.43
TRAPPC11-201ENST00000334690 CSPG5O95196 566 aa17.74■□□□□ 0.43
TRAPPC11-201ENST00000334690 ESRRBO95718 433 aa17.74■□□□□ 0.43
TRAPPC11-201ENST00000334690 TFRCP02786 760 aaKnown RBP17.74■□□□□ 0.43
TRAPPC11-201ENST00000334690 ACCSLQ4AC99 568 aa17.74■□□□□ 0.43
TRAPPC11-201ENST00000334690 C6orf10Q5SRN2 563 aa17.74■□□□□ 0.43
TRAPPC11-201ENST00000334690 CEP19Q96LK0 163 aa17.74■□□□□ 0.43
TRAPPC11-201ENST00000334690 RMDN2Q96LZ7 410 aa17.74■□□□□ 0.43
TRAPPC11-201ENST00000334690 SLC4A9Q96Q91 983 aa17.74■□□□□ 0.43
TRAPPC11-201ENST00000334690 TM9SF1O15321 606 aa17.74■□□□□ 0.43
TRAPPC11-201ENST00000334690 VEGFAP15692 232 aaPredicted RBP17.74■□□□□ 0.43
TRAPPC11-201ENST00000334690 HNRNPH3P31942 346 aaKnown RBP17.74■□□□□ 0.43
TRAPPC11-201ENST00000334690 EFL1Q7Z2Z2 1120 aaKnown RBP17.74■□□□□ 0.43
TRAPPC11-201ENST00000334690 MAP4K3Q8IVH8 894 aa17.74■□□□□ 0.43
TRAPPC11-201ENST00000334690 LBHD1Q9BQE6 289 aaPredicted RBP17.74■□□□□ 0.43
TRAPPC11-201ENST00000334690 MMTAG2Q9BU76 263 aaKnown RBP17.74■□□□□ 0.43
TRAPPC11-201ENST00000334690 LRRC40Q9H9A6 602 aa17.74■□□□□ 0.43
TRAPPC11-201ENST00000334690 FAM153BP0C7A2 387 aa17.73■□□□□ 0.43
TRAPPC11-201ENST00000334690 RARAP10276 462 aa17.73■□□□□ 0.43
TRAPPC11-201ENST00000334690 SLC2A3P11169 496 aa17.73■□□□□ 0.43
TRAPPC11-201ENST00000334690 FAM153CQ494X1 144 aa17.73■□□□□ 0.43
TRAPPC11-201ENST00000334690 WDR59Q6PJI9 974 aa17.73■□□□□ 0.43
TRAPPC11-201ENST00000334690 ARHGEF19Q8IW93 802 aa17.73■□□□□ 0.43
TRAPPC11-201ENST00000334690 RXFP2Q8WXD0 754 aa17.73■□□□□ 0.43
TRAPPC11-201ENST00000334690 DNAJC19Q96DA6 116 aa17.73■□□□□ 0.43
TRAPPC11-201ENST00000334690 MRIQ9BWK5 157 aa17.73■□□□□ 0.43
TRAPPC11-201ENST00000334690 FAM153AQ9UHL3 310 aa17.73■□□□□ 0.43
TRAPPC11-201ENST00000334690 CPA2P48052 419 aa17.73■□□□□ 0.43
TRAPPC11-201ENST00000334690 OAZ1P54368 228 aa17.73■□□□□ 0.43
TRAPPC11-201ENST00000334690 HDAC4P56524 1084 aa17.73■□□□□ 0.43
TRAPPC11-201ENST00000334690 SKOR1P84550 965 aa17.73■□□□□ 0.43
TRAPPC11-201ENST00000334690 PCSK7Q16549 785 aa17.73■□□□□ 0.43
TRAPPC11-201ENST00000334690 DACT2Q5SW24 774 aa17.73■□□□□ 0.43
TRAPPC11-201ENST00000334690 C1orf186Q6ZWK4 172 aa17.73■□□□□ 0.43
TRAPPC11-201ENST00000334690 TBCBQ99426 244 aa17.73■□□□□ 0.43
TRAPPC11-201ENST00000334690 WDCPQ9H6R7 721 aa17.73■□□□□ 0.43
TRAPPC11-201ENST00000334690 SLC4A7Q9Y6M7 1214 aa17.73■□□□□ 0.43
TRAPPC11-201ENST00000334690 TRPC5OSA6NMA1 111 aa17.73■□□□□ 0.43
TRAPPC11-201ENST00000334690 ACADSP16219 412 aa17.73■□□□□ 0.43
TRAPPC11-201ENST00000334690 CYP2B6P20813 491 aa17.73■□□□□ 0.43
TRAPPC11-201ENST00000334690 CPT1AP50416 773 aa17.73■□□□□ 0.43
TRAPPC11-201ENST00000334690 STX5Q13190 355 aa17.73■□□□□ 0.43
TRAPPC11-201ENST00000334690 SNX17Q15036 470 aa17.73■□□□□ 0.43
TRAPPC11-201ENST00000334690 SLC30A10Q6XR72 485 aa17.73■□□□□ 0.43
TRAPPC11-201ENST00000334690 EMC1Q8N766 993 aa17.73■□□□□ 0.43
TRAPPC11-201ENST00000334690 HAS1Q92839 578 aa17.73■□□□□ 0.43
TRAPPC11-201ENST00000334690 ATRNO75882 1429 aa17.73■□□□□ 0.43
TRAPPC11-201ENST00000334690 HIST1H2AGP0C0S8 130 aaPredicted RBP17.72■□□□□ 0.43
TRAPPC11-201ENST00000334690 HIST1H2ADP20671 130 aa17.72■□□□□ 0.43
TRAPPC11-201ENST00000334690 ACO1P21399 889 aaKnown RBP17.72■□□□□ 0.43
TRAPPC11-201ENST00000334690 RPL21P46778 160 aaKnown RBP17.72■□□□□ 0.43
TRAPPC11-201ENST00000334690 CYTH1Q15438 398 aa17.72■□□□□ 0.43
TRAPPC11-201ENST00000334690 MIIPQ5JXC2 388 aa17.72■□□□□ 0.43
TRAPPC11-201ENST00000334690 HIST1H2AHQ96KK5 128 aa17.72■□□□□ 0.43
TRAPPC11-201ENST00000334690 HIST1H2AJQ99878 128 aa17.72■□□□□ 0.43
TRAPPC11-201ENST00000334690 H2AFJQ9BTM1 129 aa17.72■□□□□ 0.43
TRAPPC11-201ENST00000334690 CXorf56Q9H5V9 222 aa17.72■□□□□ 0.43
TRAPPC11-201ENST00000334690 RUBCNLQ9H714 662 aa17.72■□□□□ 0.43
TRAPPC11-201ENST00000334690 GPBP1L1Q9HC44 474 aaPredicted RBP17.72■□□□□ 0.43
TRAPPC11-201ENST00000334690 PKD2L2Q9NZM6 624 aa17.72■□□□□ 0.43
TRAPPC11-201ENST00000334690 ZC3H4Q9UPT8 1303 aaKnown RBP17.72■□□□□ 0.43
TRAPPC11-201ENST00000334690 GHRP10912 638 aa17.72■□□□□ 0.43
TRAPPC11-201ENST00000334690 GID8Q9NWU2 228 aa17.72■□□□□ 0.43
TRAPPC11-201ENST00000334690 CYP3A7-CYP3A51PA0A087WV96 503 aa17.72■□□□□ 0.43
TRAPPC11-201ENST00000334690 DNALI1O14645 258 aaPredicted RBP17.72■□□□□ 0.43
TRAPPC11-201ENST00000334690 CYP3A7P24462 503 aa17.72■□□□□ 0.43
TRAPPC11-201ENST00000334690 GRK2P25098 689 aa17.72■□□□□ 0.43
TRAPPC11-201ENST00000334690 ZNF268Q14587 947 aaPredicted RBP17.72■□□□□ 0.43
TRAPPC11-201ENST00000334690 GNASQ5JWF2 1037 aa17.72■□□□□ 0.43
TRAPPC11-201ENST00000334690 GLRA4Q5JXX5 417 aa17.72■□□□□ 0.43
TRAPPC11-201ENST00000334690 IL31Q6EBC2 164 aa17.72■□□□□ 0.43
TRAPPC11-201ENST00000334690 GRAMD4Q6IC98 578 aa17.72■□□□□ 0.43
TRAPPC11-201ENST00000334690 SRP72O76094 671 aaKnown RBP17.72■□□□□ 0.43
TRAPPC11-201ENST00000334690 ORC1Q13415 861 aa17.72■□□□□ 0.43
TRAPPC11-201ENST00000334690 CBWD6Q4V339 395 aa17.72■□□□□ 0.43
TRAPPC11-201ENST00000334690 CBWD3Q5JTY5 395 aa17.72■□□□□ 0.43
TRAPPC11-201ENST00000334690 CBWD5Q5RIA9 395 aa17.72■□□□□ 0.43
TRAPPC11-201ENST00000334690 SLFN11Q7Z7L1 901 aa17.72■□□□□ 0.43
TRAPPC11-201ENST00000334690 ZNF512Q96ME7 567 aaPredicted RBP17.72■□□□□ 0.43
TRAPPC11-201ENST00000334690 HAO1Q9UJM8 370 aa17.72■□□□□ 0.43
TRAPPC11-201ENST00000334690 AP4E1Q9UPM8 1137 aa17.72■□□□□ 0.43
TRAPPC11-201ENST00000334690 AAR2Q9Y312 384 aaKnown RBP17.72■□□□□ 0.43
TRAPPC11-201ENST00000334690 PDE2AO00408 941 aaPredicted RBP17.71■□□□□ 0.43
TRAPPC11-201ENST00000334690 AKAP10O43572 662 aa17.71■□□□□ 0.43
TRAPPC11-201ENST00000334690 AP1G2O75843 785 aa17.71■□□□□ 0.43
TRAPPC11-201ENST00000334690 UBOX5O94941 541 aa17.71■□□□□ 0.43
TRAPPC11-201ENST00000334690 RGS4P49798 205 aa17.71■□□□□ 0.43
TRAPPC11-201ENST00000334690 GEMP55040 296 aa17.71■□□□□ 0.43
TRAPPC11-201ENST00000334690 SLITRK1Q96PX8 696 aa17.71■□□□□ 0.43
TRAPPC11-201ENST00000334690 DCLRE1BQ9H816 532 aa17.71■□□□□ 0.43
TRAPPC11-201ENST00000334690 RXFP1Q9HBX9 757 aa17.71■□□□□ 0.43
TRAPPC11-201ENST00000334690 CASS4Q9NQ75 786 aa17.71■□□□□ 0.43
TRAPPC11-201ENST00000334690 LATS2Q9NRM7 1088 aa17.71■□□□□ 0.43
TRAPPC11-201ENST00000334690 AFF4Q9UHB7 1163 aaKnown RBP17.71■□□□□ 0.43
TRAPPC11-201ENST00000334690 MAP3K6O95382 1288 aa17.71■□□□□ 0.43
TRAPPC11-201ENST00000334690 DSG3P32926 999 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms