RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 OVOS2A0A0G2JMS6 1433 aa12.5□□□□□ -0.41
PCF11-201ENST00000298281 OVOS2A0A0J9YW53 1432 aa12.5□□□□□ -0.41
PCF11-201ENST00000298281 OVOS2Q6IE36 1432 aa12.5□□□□□ -0.41
PCF11-201ENST00000298281 C19orf81C9J6K1 198 aa12.5□□□□□ -0.41
PCF11-201ENST00000298281 LARGE1O95461 756 aa12.5□□□□□ -0.41
PCF11-201ENST00000298281 APRTP07741 180 aa12.5□□□□□ -0.41
PCF11-201ENST00000298281 NPEPPSP55786 919 aa12.5□□□□□ -0.41
PCF11-201ENST00000298281 CLEC16AQ2KHT3 1053 aa12.5□□□□□ -0.41
PCF11-201ENST00000298281 LRRC8DQ7L1W4 858 aa12.5□□□□□ -0.41
PCF11-201ENST00000298281 DSG4Q86SJ6 1040 aa12.5□□□□□ -0.41
PCF11-201ENST00000298281 SLC25A41Q8N5S1 370 aa12.5□□□□□ -0.41
PCF11-201ENST00000298281 TEX13BQ9BXU2 312 aa12.5□□□□□ -0.41
PCF11-201ENST00000298281 SLITRK2Q9H156 845 aa12.5□□□□□ -0.41
PCF11-201ENST00000298281 LIMA1Q9UHB6 759 aaKnown RBP12.5□□□□□ -0.41
PCF11-201ENST00000298281 CDYLQ9Y232 598 aa12.5□□□□□ -0.41
PCF11-201ENST00000298281 PNPLA7Q6ZV29 1317 aa12.49□□□□□ -0.41
PCF11-201ENST00000298281 MPOP05164 745 aa12.49□□□□□ -0.41
PCF11-201ENST00000298281 LBPP18428 481 aa12.49□□□□□ -0.41
PCF11-201ENST00000298281 SPRP35270 261 aaPredicted RBP12.49□□□□□ -0.41
PCF11-201ENST00000298281 RAD23BP54727 409 aa12.49□□□□□ -0.41
PCF11-201ENST00000298281 WDR72Q3MJ13 1102 aa12.49□□□□□ -0.41
PCF11-201ENST00000298281 ZNF746Q6NUN9 644 aaPredicted RBP12.49□□□□□ -0.41
PCF11-201ENST00000298281 CYFIP1Q7L576 1253 aa12.49□□□□□ -0.41
PCF11-201ENST00000298281 SYNE4Q8N205 404 aa12.49□□□□□ -0.41
PCF11-201ENST00000298281 SPATA4Q8NEY3 305 aa12.49□□□□□ -0.41
PCF11-201ENST00000298281 CHMP2BQ9UQN3 213 aa12.49□□□□□ -0.41
PCF11-201ENST00000298281 HEATR9A2RTY3 570 aa12.49□□□□□ -0.41
PCF11-201ENST00000298281 PCDH8O95206 1070 aa12.49□□□□□ -0.41
PCF11-201ENST00000298281 CCT8P50990 548 aa12.49□□□□□ -0.41
PCF11-201ENST00000298281 HNRNPH2P55795 449 aaKnown RBP12.49□□□□□ -0.41
PCF11-201ENST00000298281 SP8Q8IXZ3 490 aa12.49□□□□□ -0.41
PCF11-201ENST00000298281 USP33Q8TEY7 942 aa12.49□□□□□ -0.41
PCF11-201ENST00000298281 OSCP1Q8WVF1 389 aa12.49□□□□□ -0.41
PCF11-201ENST00000298281 APEX2Q9UBZ4 518 aa12.49□□□□□ -0.41
PCF11-201ENST00000298281 DBR1Q9UK59 544 aaKnown RBP12.49□□□□□ -0.41
PCF11-201ENST00000298281 PIN4Q9Y237 131 aaKnown RBP12.49□□□□□ -0.41
PCF11-201ENST00000298281 DYNC1LI2O43237 492 aaPredicted RBP12.49□□□□□ -0.41
PCF11-201ENST00000298281 ALBP02768 609 aa12.49□□□□□ -0.41
PCF11-201ENST00000298281 PLA2G4AP47712 749 aa12.49□□□□□ -0.41
PCF11-201ENST00000298281 CCR4P51679 360 aa12.49□□□□□ -0.41
PCF11-201ENST00000298281 IL2P60568 153 aa12.49□□□□□ -0.41
PCF11-201ENST00000298281 TMEM132DQ14C87 1099 aa12.49□□□□□ -0.41
PCF11-201ENST00000298281 POLD3Q15054 466 aaPredicted RBP12.49□□□□□ -0.41
PCF11-201ENST00000298281 RUVBL2Q9Y230 463 aaKnown RBP12.49□□□□□ -0.41
PCF11-201ENST00000298281 SLC9A8Q9Y2E8 581 aa12.49□□□□□ -0.41
PCF11-201ENST00000298281 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.49□□□□□ -0.41
PCF11-201ENST00000298281 ACADLP28330 430 aa12.49□□□□□ -0.41
PCF11-201ENST00000298281 STIP1P31948 543 aaKnown RBP12.49□□□□□ -0.41
PCF11-201ENST00000298281 NLRP11P59045 1033 aaKnown RBP12.49□□□□□ -0.41
PCF11-201ENST00000298281 BTN3A2P78410 334 aa12.49□□□□□ -0.41
PCF11-201ENST00000298281 PDK1Q15118 436 aa12.49□□□□□ -0.41
PCF11-201ENST00000298281 WNK4Q96J92 1243 aa12.49□□□□□ -0.41
PCF11-201ENST00000298281 CHAMP1Q96JM3 812 aa12.49□□□□□ -0.41
PCF11-201ENST00000298281 CCDC134Q9H6E4 229 aa12.49□□□□□ -0.41
PCF11-201ENST00000298281 PAK5Q9P286 719 aa12.49□□□□□ -0.41
PCF11-201ENST00000298281 ZNF624Q9P2J8 865 aaPredicted RBP12.49□□□□□ -0.41
PCF11-201ENST00000298281 PITPNM2Q9BZ72 1349 aa12.49□□□□□ -0.41
PCF11-201ENST00000298281 BMP10O95393 424 aa12.49□□□□□ -0.41
PCF11-201ENST00000298281 UBA1P22314 1058 aaKnown RBP12.49□□□□□ -0.41
PCF11-201ENST00000298281 CACNB3P54284 484 aa12.49□□□□□ -0.41
PCF11-201ENST00000298281 POU4F1Q01851 419 aa12.49□□□□□ -0.41
PCF11-201ENST00000298281 SLC18A3Q16572 532 aa12.49□□□□□ -0.41
PCF11-201ENST00000298281 RNF44Q7L0R7 432 aa12.49□□□□□ -0.41
PCF11-201ENST00000298281 RD3Q7Z3Z2 195 aa12.49□□□□□ -0.41
PCF11-201ENST00000298281 SPATA21Q7Z572 469 aa12.49□□□□□ -0.41
PCF11-201ENST00000298281 PARP9Q8IXQ6 854 aa12.49□□□□□ -0.41
PCF11-201ENST00000298281 MB21D2Q8IYB1 491 aaPredicted RBP12.49□□□□□ -0.41
PCF11-201ENST00000298281 RGL4Q8IZJ4 473 aa12.49□□□□□ -0.41
PCF11-201ENST00000298281 RIC8BQ9NVN3 520 aa12.49□□□□□ -0.41
PCF11-201ENST00000298281 CPDO75976 1380 aa12.49□□□□□ -0.41
PCF11-201ENST00000298281 RFC5P40937 340 aa12.49□□□□□ -0.41
PCF11-201ENST00000298281 SRSF11Q05519 484 aaKnown RBP12.49□□□□□ -0.41
PCF11-201ENST00000298281 ALG11Q2TAA5 492 aa12.49□□□□□ -0.41
PCF11-201ENST00000298281 TBC1D25Q3MII6 688 aa12.49□□□□□ -0.41
PCF11-201ENST00000298281 UGT3A1Q6NUS8 523 aa12.49□□□□□ -0.41
PCF11-201ENST00000298281 AGGF1Q8N302 714 aaeCLIP12.49□□□□□ -0.41
PCF11-201ENST00000298281 MED8Q96G25 268 aa12.49□□□□□ -0.41
PCF11-201ENST00000298281 NLNQ9BYT8 704 aa12.49□□□□□ -0.41
PCF11-201ENST00000298281 RAD21L1Q9H4I0 556 aa12.49□□□□□ -0.41
PCF11-201ENST00000298281 ALG13Q9NP73 1137 aaKnown RBP12.49□□□□□ -0.41
PCF11-201ENST00000298281 WWOXQ9NZC7 414 aa12.49□□□□□ -0.41
PCF11-201ENST00000298281 PSMC3IPQ9P2W1 217 aaPredicted RBP12.49□□□□□ -0.41
PCF11-201ENST00000298281 LNPEPQ9UIQ6 1025 aa12.49□□□□□ -0.41
PCF11-201ENST00000298281 HIST1H2ABP04908 130 aa12.48□□□□□ -0.41
PCF11-201ENST00000298281 TXNP10599 105 aaKnown RBP12.48□□□□□ -0.41
PCF11-201ENST00000298281 CYP2D6P10635 497 aa12.48□□□□□ -0.41
PCF11-201ENST00000298281 MYL2P10916 166 aa12.48□□□□□ -0.41
PCF11-201ENST00000298281 SESN2P58004 480 aaPredicted RBP12.48□□□□□ -0.41
PCF11-201ENST00000298281 TGM3Q08188 693 aa12.48□□□□□ -0.41
PCF11-201ENST00000298281 PTK6Q13882 451 aa12.48□□□□□ -0.41
PCF11-201ENST00000298281 C1DQ13901 141 aaKnown RBP12.48□□□□□ -0.41
PCF11-201ENST00000298281 HIST3H2AQ7L7L0 130 aa12.48□□□□□ -0.41
PCF11-201ENST00000298281 SLC13A5Q86YT5 568 aaPredicted RBP12.48□□□□□ -0.41
PCF11-201ENST00000298281 CAMK1DQ8IU85 385 aa12.48□□□□□ -0.41
PCF11-201ENST00000298281 ELOA2Q8IYF1 753 aaPredicted RBP12.48□□□□□ -0.41
PCF11-201ENST00000298281 HIST1H2ACQ93077 130 aa12.48□□□□□ -0.41
PCF11-201ENST00000298281 CNDP1Q96KN2 507 aa12.48□□□□□ -0.41
PCF11-201ENST00000298281 THUMPD3Q9BV44 507 aaKnown RBP12.48□□□□□ -0.41
PCF11-201ENST00000298281 VPS33BQ9H267 617 aa12.48□□□□□ -0.41
PCF11-201ENST00000298281 BTBD3Q9Y2F9 522 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms