RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 SF3B3Q15393 1217 aaKnown RBP13.73□□□□□ -0.21
COL1A1-201ENST00000225964 C4orf22Q6V702 233 aa13.73□□□□□ -0.21
COL1A1-201ENST00000225964 ARMC2Q8NEN0 867 aa13.73□□□□□ -0.21
COL1A1-201ENST00000225964 ADARB2Q9NS39 739 aaKnown RBP13.73□□□□□ -0.21
COL1A1-201ENST00000225964 KRT84Q9NSB2 600 aa13.73□□□□□ -0.21
COL1A1-201ENST00000225964 TRPM5Q9NZQ8 1165 aa13.73□□□□□ -0.21
COL1A1-201ENST00000225964 RNF103O00237 685 aa13.72□□□□□ -0.21
COL1A1-201ENST00000225964 CPSF4O95639 269 aaKnown RBP13.72□□□□□ -0.21
COL1A1-201ENST00000225964 ICAM1P05362 532 aa13.72□□□□□ -0.21
COL1A1-201ENST00000225964 CEP78Q5JTW2 689 aa13.72□□□□□ -0.21
COL1A1-201ENST00000225964 RD3Q7Z3Z2 195 aa13.72□□□□□ -0.21
COL1A1-201ENST00000225964 CENPLQ8N0S6 344 aaPredicted RBP13.72□□□□□ -0.21
COL1A1-201ENST00000225964 MYO1HQ8N1T3 1032 aa13.72□□□□□ -0.21
COL1A1-201ENST00000225964 SLC12A8A0AV02 714 aa13.72□□□□□ -0.21
COL1A1-201ENST00000225964 TBKBP1A7MCY6 615 aa13.72□□□□□ -0.21
COL1A1-201ENST00000225964 AGAP9Q5VTM2 703 aa13.72□□□□□ -0.21
COL1A1-201ENST00000225964 IGDCC4Q8TDY8 1250 aa13.72□□□□□ -0.21
COL1A1-201ENST00000225964 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.72□□□□□ -0.212e-12■■■■■ 101.6
COL1A1-201ENST00000225964 THUMPD3Q9BV44 507 aaKnown RBP13.72□□□□□ -0.21
COL1A1-201ENST00000225964 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.72□□□□□ -0.21
COL1A1-201ENST00000225964 TNNI3P19429 210 aa13.72□□□□□ -0.21
COL1A1-201ENST00000225964 ARHGAP17Q68EM7 881 aa13.72□□□□□ -0.21
COL1A1-201ENST00000225964 DDX42Q86XP3 938 aaKnown RBP eCLIP13.72□□□□□ -0.21
COL1A1-201ENST00000225964 PCSK9Q8NBP7 692 aaKnown RBP13.72□□□□□ -0.21
COL1A1-201ENST00000225964 CLCN3P51790 818 aa13.72□□□□□ -0.21
COL1A1-201ENST00000225964 FMR1Q06787 632 aaKnown RBP eCLIP13.72□□□□□ -0.21
COL1A1-201ENST00000225964 MMGT1Q8N4V1 131 aa13.72□□□□□ -0.21
COL1A1-201ENST00000225964 DPF2Q92785 391 aa13.72□□□□□ -0.21
COL1A1-201ENST00000225964 CYFIP2Q96F07 1278 aa13.72□□□□□ -0.21
COL1A1-201ENST00000225964 BLOC1S6Q9UL45 172 aa13.72□□□□□ -0.21
COL1A1-201ENST00000225964 PADI4Q9UM07 663 aa13.72□□□□□ -0.21
COL1A1-201ENST00000225964 ZNF609O15014 1411 aa13.72□□□□□ -0.21
COL1A1-201ENST00000225964 RHOBTB3O94955 611 aa13.72□□□□□ -0.21
COL1A1-201ENST00000225964 KLRC2P26717 231 aa13.72□□□□□ -0.21
COL1A1-201ENST00000225964 CENPCQ03188 943 aa13.72□□□□□ -0.21
COL1A1-201ENST00000225964 CYP51A1Q16850 503 aa13.72□□□□□ -0.21
COL1A1-201ENST00000225964 P3H2Q8IVL5 708 aa13.72□□□□□ -0.21
COL1A1-201ENST00000225964 AGBL3Q8NEM8 1001 aa13.72□□□□□ -0.21
COL1A1-201ENST00000225964 RUBCNQ92622 972 aa13.72□□□□□ -0.21
COL1A1-201ENST00000225964 KCNK16Q96T55 309 aa13.72□□□□□ -0.21
COL1A1-201ENST00000225964 CLTCL1P53675 1640 aa13.72□□□□□ -0.21
COL1A1-201ENST00000225964 PQBP1O60828 265 aaKnown RBP13.72□□□□□ -0.21
COL1A1-201ENST00000225964 TOMM70O94826 608 aa13.72□□□□□ -0.21
COL1A1-201ENST00000225964 CTCFP49711 727 aaPredicted RBP13.72□□□□□ -0.21
COL1A1-201ENST00000225964 MRNIPQ6NTE8 343 aa13.72□□□□□ -0.21
COL1A1-201ENST00000225964 ZNF34Q8IZ26 560 aa13.72□□□□□ -0.21
COL1A1-201ENST00000225964 ADSSL1Q8N142 457 aa13.72□□□□□ -0.21
COL1A1-201ENST00000225964 THAP11Q96EK4 314 aa13.72□□□□□ -0.21
COL1A1-201ENST00000225964 SMARCAL1Q9NZC9 954 aa13.72□□□□□ -0.21
COL1A1-201ENST00000225964 PLA2G4CQ9UP65 541 aa13.72□□□□□ -0.21
COL1A1-201ENST00000225964 TRPC5OSA6NMA1 111 aa13.71□□□□□ -0.21
COL1A1-201ENST00000225964 GAS2O43903 313 aaKnown RBP13.71□□□□□ -0.21
COL1A1-201ENST00000225964 SPAG6O75602 509 aa13.71□□□□□ -0.21
COL1A1-201ENST00000225964 RHOAP61586 193 aa13.71□□□□□ -0.21
COL1A1-201ENST00000225964 RPL10AP62906 217 aaKnown RBP13.71□□□□□ -0.21
COL1A1-201ENST00000225964 ACAD10Q6JQN1 1059 aa13.71□□□□□ -0.21
COL1A1-201ENST00000225964 XRRA1Q6P2D8 792 aa13.71□□□□□ -0.21
COL1A1-201ENST00000225964 ITIH5Q86UX2 942 aa13.71□□□□□ -0.21
COL1A1-201ENST00000225964 STAMBPL1Q96FJ0 436 aa13.71□□□□□ -0.21
COL1A1-201ENST00000225964 CNDP1Q96KN2 507 aa13.71□□□□□ -0.21
COL1A1-201ENST00000225964 LNPEPQ9UIQ6 1025 aa13.71□□□□□ -0.21
COL1A1-201ENST00000225964 DSEQ9UL01 958 aa13.71□□□□□ -0.21
COL1A1-201ENST00000225964 AAR2Q9Y312 384 aaKnown RBP13.71□□□□□ -0.21
COL1A1-201ENST00000225964 FGFR1P11362 822 aa13.71□□□□□ -0.21
COL1A1-201ENST00000225964 NME5P56597 212 aa13.71□□□□□ -0.21
COL1A1-201ENST00000225964 STARD3Q14849 445 aa13.71□□□□□ -0.21
COL1A1-201ENST00000225964 MED8Q96G25 268 aa13.71□□□□□ -0.21
COL1A1-201ENST00000225964 AHCYL2Q96HN2 611 aaKnown RBP13.71□□□□□ -0.21
COL1A1-201ENST00000225964 RMND5AQ9H871 391 aa13.71□□□□□ -0.21
COL1A1-201ENST00000225964 MANSC1Q9H8J5 431 aa13.71□□□□□ -0.21
COL1A1-201ENST00000225964 PSMD12O00232 456 aaPredicted RBP13.71□□□□□ -0.21
COL1A1-201ENST00000225964 MAP3K6O95382 1288 aa13.71□□□□□ -0.21
COL1A1-201ENST00000225964 THP07101 528 aa13.71□□□□□ -0.21
COL1A1-201ENST00000225964 POTEAQ6S8J7 498 aa13.71□□□□□ -0.21
COL1A1-201ENST00000225964 TMC7Q7Z402 723 aa13.71□□□□□ -0.21
COL1A1-201ENST00000225964 ALDH8A1Q9H2A2 487 aaPredicted RBP13.71□□□□□ -0.21
COL1A1-201ENST00000225964 IARS2Q9NSE4 1012 aaKnown RBP13.71□□□□□ -0.21
COL1A1-201ENST00000225964 PLA2R1Q13018 1463 aa13.71□□□□□ -0.21
COL1A1-201ENST00000225964 SPATA31E1Q6ZUB1 1445 aa13.71□□□□□ -0.22
COL1A1-201ENST00000225964 STAU1O95793 577 aaKnown RBP13.71□□□□□ -0.22
COL1A1-201ENST00000225964 MTSS1LQ765P7 747 aa13.71□□□□□ -0.22
COL1A1-201ENST00000225964 THG1LQ9NWX6 298 aaKnown RBP13.71□□□□□ -0.22
COL1A1-201ENST00000225964 CDY2AQ9Y6F7 541 aa13.71□□□□□ -0.22
COL1A1-201ENST00000225964 CDY1Q9Y6F8 540 aa13.71□□□□□ -0.22
COL1A1-201ENST00000225964 GTF2E2P29084 291 aaKnown RBP13.71□□□□□ -0.22
COL1A1-201ENST00000225964 MPZL3Q6UWV2 235 aa13.71□□□□□ -0.22
COL1A1-201ENST00000225964 RRM2P31350 389 aa13.7□□□□□ -0.22
COL1A1-201ENST00000225964 SLFN11Q7Z7L1 901 aa13.7□□□□□ -0.22
COL1A1-201ENST00000225964 RDM1Q8NG50 284 aa13.7□□□□□ -0.22
COL1A1-201ENST00000225964 UBXN6Q9BZV1 441 aa13.7□□□□□ -0.22
COL1A1-201ENST00000225964 TMEM39AQ9NV64 488 aa13.7□□□□□ -0.22
COL1A1-201ENST00000225964 CNTNAP2Q9UHC6 1331 aa13.7□□□□□ -0.22
COL1A1-201ENST00000225964 RGL2O15211 777 aa13.7□□□□□ -0.22
COL1A1-201ENST00000225964 CYP2C8P10632 490 aa13.7□□□□□ -0.22
COL1A1-201ENST00000225964 DYNC1I2Q13409 638 aaKnown RBP13.7□□□□□ -0.22
COL1A1-201ENST00000225964 USP39Q53GS9 565 aaKnown RBP13.7□□□□□ -0.22
COL1A1-201ENST00000225964 OR2W6PQ8NHA6 318 aa13.7□□□□□ -0.22
COL1A1-201ENST00000225964 CLPBQ9H078 707 aa13.7□□□□□ -0.22
COL1A1-201ENST00000225964 IMPAD1Q9NX62 359 aa13.7□□□□□ -0.22
COL1A1-201ENST00000225964 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms