RNA–Protein interactions for RNA: ENSMUST00000170033.1

Lig4-202, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 3,105 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-202ENSMUST00000170033 PhbP67778 272 aaKnown RBP6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 Taf1bP97358 586 aa6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 Neurl1bQ0MW30 546 aa6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 Ankrd33bQ3U0L2 486 aa6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 Nat8lQ3UGX3 299 aa6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 R3hdm4Q4VBF2 262 aa6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 Cd53Q61451 219 aa6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 Rab34Q64008 259 aa6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 Gcfc2Q8BKT3 769 aa6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 Ston2Q8BZ60 895 aa6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 Sh2d5Q8JZW5 429 aa6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 Pde6cQ91ZQ1 861 aa6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 Nek8Q91ZR4 698 aa6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 Nsmce3Q9CPR8 279 aa6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 Emc2Q9CRD2 297 aa6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 Golga1Q9CW79 758 aa6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 Pard6bQ9JK83 371 aa6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 Txnrd2Q9JLT4 524 aa6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 CtsfQ9R013 462 aa6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 Rasgrp1Q9Z1S3 795 aa6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 Itga9B8JK39 1036 aa6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 D830030K20RikE9PYQ5 218 aa6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 Slc9a3G3X939 829 aa6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 Zbtb11G5E8B9 1050 aaKnown RBP6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 Gm3043K7N693 218 aa6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 Gm16440K7N6G6 218 aa6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 Gm2244L7N2A3 218 aa6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 Gm3278L7N2D2 218 aa6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 Gm8271L7N2E2 218 aa6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 Eftud2O08810 971 aaKnown RBP6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 DesP31001 469 aaKnown RBP6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 Fmr1P35922 614 aaKnown RBP6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 Actr2P61161 394 aa6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 Smyd1P97443 490 aa6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 Ccndbp1Q3TVC7 356 aa6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 Slc27a5Q4LDG0 689 aa6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 Atp4aQ64436 1033 aa6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 Klhdc10Q6PAR0 439 aa6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 Carns1Q6ZPS2 827 aa6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 Ccdc25Q78PG9 208 aa6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 Zswim6Q80TB7 1207 aa6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 Enoph1Q8BGB7 257 aa6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 Creb3l2Q8BH52 521 aa6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 B3glctQ8BHT6 489 aa6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 Fbxo28Q8BIG4 368 aa6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 Aste1Q8BIR2 672 aa6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 Azin2Q8BVM4 459 aa6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 Tmem120aQ8C1E7 343 aa6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 Serpinb13Q8CDC0 389 aa6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 Vps50Q8CI71 964 aa6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 Upb1Q8VC97 393 aa6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 YarsQ91WQ3 528 aaKnown RBP6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 Tbrg4Q91YM4 630 aaKnown RBP6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 Polr3fQ921X6 316 aa6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 Gimap4Q99JY3 219 aa6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 NwcQ9CQI4 244 aa6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 MtrexQ9CZU3 1040 aaKnown RBP6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 Tmco5aQ9D9D5 303 aa6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 MesdQ9ERE7 224 aa6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 Ddx24Q9ESV0 857 aaKnown RBP6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 Pias4Q9JM05 507 aa6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 Znf354bQ9QXT9 601 aa6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 Speer3W4VSP1 261 aa6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 Gm5926E9PWJ8 236 aa6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 Zfp94E9Q6Y4 486 aa6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 Clk2O35491 499 aa6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 ChkbO55229 394 aa6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 CidebO70303 219 aa6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 Krt13P08730 437 aa6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 PrkceP16054 737 aa6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 PtpraP18052 829 aa6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 Cap1P40124 474 aa6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 Eps15P42567 897 aa6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 Hcls1P49710 486 aaKnown RBP6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 MafP54843 370 aa6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 Lzts1P60853 599 aa6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 Casp7P97864 303 aa6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 Tex35Q14BK3 207 aa6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 Palb2Q3U0P1 1104 aa6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 Ccdc61Q3UJV1 511 aa6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 Gm1587Q3UT80 123 aa6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 Fam81aQ3UXZ6 364 aa6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 Ccdc110Q3V125 848 aa6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 Pabpn1lQ5XFR0 273 aa6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 Tnfaip3Q60769 775 aa6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 PrkciQ62074 595 aaKnown RBP6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 Trim21Q62191 470 aa6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 HpseQ6YGZ1 535 aa6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 Kcnt1Q6ZPR4 1224 aa6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 Sox11Q7M6Y2 395 aa6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 C2cd5Q7TPS5 1016 aaKnown RBP6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 Znf12Q7TSI0 686 aa6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 Tcp10aQ80W76 438 aa6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 Camta2Q80Y50 1208 aa6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 Tmem39bQ810L4 492 aa6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 HhatQ8BMT9 499 aa6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 Ppm1kQ8BXN7 372 aa6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 Socs4Q91ZA6 436 aa6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 Ugp2Q91ZJ5 508 aa6.54□□□□□ -1.36
Lig4-202ENSMUST00000170033 Q9CQC3 228 aa6.54□□□□□ -1.36
Retrieved 100 of 22,080 RNA–protein pairs in 48.7 ms