RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 FAM228AQ86W67 206 aa10.93□□□□□ -0.66
VPS25-203ENST00000589520 DDX42Q86XP3 938 aaKnown RBP eCLIP10.93□□□□□ -0.66
VPS25-203ENST00000589520 TMEM86AQ8N2M4 240 aa10.93□□□□□ -0.66
VPS25-203ENST00000589520 SMG8Q8ND04 991 aaKnown RBP10.93□□□□□ -0.66
VPS25-203ENST00000589520 KLHDC9Q8NEP7 349 aa10.93□□□□□ -0.66
VPS25-203ENST00000589520 CMASQ8NFW8 434 aaPredicted RBP10.93□□□□□ -0.66
VPS25-203ENST00000589520 SLC35F5Q8WV83 523 aa10.93□□□□□ -0.66
VPS25-203ENST00000589520 TMEM40Q8WWA1 233 aa10.93□□□□□ -0.66
VPS25-203ENST00000589520 PIK3R5Q8WYR1 880 aa10.93□□□□□ -0.66
VPS25-203ENST00000589520 TRIB2Q92519 343 aa10.93□□□□□ -0.66
VPS25-203ENST00000589520 SNF8Q96H20 258 aa10.93□□□□□ -0.66
VPS25-203ENST00000589520 TBCBQ99426 244 aa10.93□□□□□ -0.66
VPS25-203ENST00000589520 MRPL45Q9BRJ2 306 aaKnown RBP10.93□□□□□ -0.66
VPS25-203ENST00000589520 MCOLN1Q9GZU1 580 aa10.93□□□□□ -0.66
VPS25-203ENST00000589520 PABPC3Q9H361 631 aaKnown RBP10.93□□□□□ -0.66
VPS25-203ENST00000589520 FAM204AQ9H8W3 233 aa10.93□□□□□ -0.66
VPS25-203ENST00000589520 RSAD1Q9HA92 442 aa10.93□□□□□ -0.66
VPS25-203ENST00000589520 PRDM16Q9HAZ2 1276 aa10.93□□□□□ -0.66
VPS25-203ENST00000589520 TMBIM4Q9HC24 238 aa10.93□□□□□ -0.66
VPS25-203ENST00000589520 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.93□□□□□ -0.66
VPS25-203ENST00000589520 CYTH4Q9UIA0 394 aa10.93□□□□□ -0.66
VPS25-203ENST00000589520 PLAAQ9Y263 795 aa10.93□□□□□ -0.66
VPS25-203ENST00000589520 CDY2AQ9Y6F7 541 aa10.93□□□□□ -0.66
VPS25-203ENST00000589520 ANK1P16157 1881 aa10.93□□□□□ -0.66
VPS25-203ENST00000589520 hCG_1818297A0A087WSY0 165 aa10.92□□□□□ -0.66
VPS25-203ENST00000589520 TCRBV7S2A1N4TA0A589 114 aa10.92□□□□□ -0.66
VPS25-203ENST00000589520 FAM170AA1A519 330 aa10.92□□□□□ -0.66
VPS25-203ENST00000589520 ARHGEF37A1IGU5 675 aa10.92□□□□□ -0.66
VPS25-203ENST00000589520 C2CD4BA6NLJ0 364 aa10.92□□□□□ -0.66
VPS25-203ENST00000589520 ZNF487B1APH4 448 aa10.92□□□□□ -0.66
VPS25-203ENST00000589520 GOLGA8SH3BPF8 625 aa10.92□□□□□ -0.66
VPS25-203ENST00000589520 ADAMTS4O75173 837 aa10.92□□□□□ -0.66
VPS25-203ENST00000589520 ATF2P15336 505 aa10.92□□□□□ -0.66
VPS25-203ENST00000589520 AKAP5P24588 427 aa10.92□□□□□ -0.66
VPS25-203ENST00000589520 CTGFP29279 349 aa10.92□□□□□ -0.66
VPS25-203ENST00000589520 SSTR3P32745 418 aaPredicted RBP10.92□□□□□ -0.66
VPS25-203ENST00000589520 CDKN2BP42772 138 aa10.92□□□□□ -0.66
VPS25-203ENST00000589520 RPL21P46778 160 aaKnown RBP10.92□□□□□ -0.66
VPS25-203ENST00000589520 LHX1P48742 406 aa10.92□□□□□ -0.66
VPS25-203ENST00000589520 CDR1P51861 262 aa10.92□□□□□ -0.66
VPS25-203ENST00000589520 OGDHQ02218 1023 aa10.92□□□□□ -0.66
VPS25-203ENST00000589520 SLC25A11Q02978 314 aaKnown RBP10.92□□□□□ -0.66
VPS25-203ENST00000589520 KRT17Q04695 432 aa10.92□□□□□ -0.66
VPS25-203ENST00000589520 ZNF252P-AS1Q0IIN9 211 aa10.92□□□□□ -0.66
VPS25-203ENST00000589520 BST2Q10589 180 aaKnown RBP10.92□□□□□ -0.66
VPS25-203ENST00000589520 PTK7Q13308 1070 aa10.92□□□□□ -0.66
VPS25-203ENST00000589520 BYSLQ13895 437 aaKnown RBP10.92□□□□□ -0.66
VPS25-203ENST00000589520 TFDP2Q14188 446 aa10.92□□□□□ -0.66
VPS25-203ENST00000589520 PDK2Q15119 407 aa10.92□□□□□ -0.66
VPS25-203ENST00000589520 SOWAHAQ2M3V2 549 aa10.92□□□□□ -0.66
VPS25-203ENST00000589520 GOLGA7BQ2TAP0 167 aa10.92□□□□□ -0.66
VPS25-203ENST00000589520 FAM102AQ5T9C2 384 aaPredicted RBP10.92□□□□□ -0.66
VPS25-203ENST00000589520 LLGL2Q6P1M3 1020 aa10.92□□□□□ -0.66
VPS25-203ENST00000589520 ZDHHC24Q6UX98 284 aa10.92□□□□□ -0.66
VPS25-203ENST00000589520 ZNF771Q7L3S4 317 aaPredicted RBP10.92□□□□□ -0.66
VPS25-203ENST00000589520 PCGF5Q86SE9 256 aa10.92□□□□□ -0.66
VPS25-203ENST00000589520 CPNE8Q86YQ8 564 aa10.92□□□□□ -0.66
VPS25-203ENST00000589520 RELL1Q8IUW5 271 aa10.92□□□□□ -0.66
VPS25-203ENST00000589520 UBLCP1Q8WVY7 318 aaPredicted RBP10.92□□□□□ -0.66
VPS25-203ENST00000589520 TEKT4Q8WW24 435 aa10.92□□□□□ -0.66
VPS25-203ENST00000589520 C1orf54Q8WWF1 131 aa10.92□□□□□ -0.66
VPS25-203ENST00000589520 NKD2Q969F2 451 aaPredicted RBP10.92□□□□□ -0.66
VPS25-203ENST00000589520 RNF25Q96BH1 459 aaPredicted RBP10.92□□□□□ -0.66
VPS25-203ENST00000589520 LENG1Q96BZ8 264 aaPredicted RBP10.92□□□□□ -0.66
VPS25-203ENST00000589520 PGBD4Q96DM1 585 aa10.92□□□□□ -0.66
VPS25-203ENST00000589520 ATP6V1G3Q96LB4 118 aa10.92□□□□□ -0.66
VPS25-203ENST00000589520 TMEM109Q9BVC6 243 aa10.92□□□□□ -0.66
VPS25-203ENST00000589520 ROPN1BQ9BZX4 212 aaPredicted RBP10.92□□□□□ -0.66
VPS25-203ENST00000589520 TRIM31Q9BZY9 425 aa10.92□□□□□ -0.66
VPS25-203ENST00000589520 SENP6Q9GZR1 1112 aaPredicted RBP10.92□□□□□ -0.66
VPS25-203ENST00000589520 STMN4Q9H169 189 aaPredicted RBP10.92□□□□□ -0.66
VPS25-203ENST00000589520 NEUROG2Q9H2A3 272 aa10.92□□□□□ -0.66
VPS25-203ENST00000589520 PLEKHA4Q9H4M7 779 aa10.92□□□□□ -0.66
VPS25-203ENST00000589520 ROPN1Q9HAT0 212 aaPredicted RBP10.92□□□□□ -0.66
VPS25-203ENST00000589520 XPNPEP3Q9NQH7 507 aa10.92□□□□□ -0.66
VPS25-203ENST00000589520 ST7Q9NRC1 585 aa10.92□□□□□ -0.66
VPS25-203ENST00000589520 METTL5Q9NRN9 209 aaKnown RBP10.92□□□□□ -0.66
VPS25-203ENST00000589520 CHST7Q9NS84 486 aa10.92□□□□□ -0.66
VPS25-203ENST00000589520 FAM105AQ9NUU6 356 aa10.92□□□□□ -0.66
VPS25-203ENST00000589520 GRHL1Q9NZI5 618 aa10.92□□□□□ -0.66
VPS25-203ENST00000589520 TUBGCP4Q9UGJ1 667 aa10.92□□□□□ -0.66
VPS25-203ENST00000589520 HMGXB4Q9UGU5 601 aa10.92□□□□□ -0.66
VPS25-203ENST00000589520 ST3GAL5Q9UNP4 418 aa10.92□□□□□ -0.66
VPS25-203ENST00000589520 THSD7BQ9C0I4 1608 aa10.91□□□□□ -0.66
VPS25-203ENST00000589520 CUL9Q8IWT3 2517 aa10.91□□□□□ -0.66
VPS25-203ENST00000589520 LRRD1A4D1F6 860 aa10.91□□□□□ -0.66
VPS25-203ENST00000589520 H0YGN5 161 aa10.91□□□□□ -0.66
VPS25-203ENST00000589520 LIASO43766 372 aa10.91□□□□□ -0.66
VPS25-203ENST00000589520 LRCH4O75427 683 aa10.91□□□□□ -0.66
VPS25-203ENST00000589520 TRUB2O95900 331 aaKnown RBP10.91□□□□□ -0.66
VPS25-203ENST00000589520 ITGAVP06756 1048 aa10.91□□□□□ -0.66
VPS25-203ENST00000589520 THP07101 528 aa10.91□□□□□ -0.66
VPS25-203ENST00000589520 PDGFRAP16234 1089 aa10.91□□□□□ -0.66
VPS25-203ENST00000589520 KDELR1P24390 212 aa10.91□□□□□ -0.66
VPS25-203ENST00000589520 SDC4P31431 198 aa10.91□□□□□ -0.66
VPS25-203ENST00000589520 ADCY8P40145 1251 aa10.91□□□□□ -0.66
VPS25-203ENST00000589520 PTPN9P43378 593 aa10.91□□□□□ -0.66
VPS25-203ENST00000589520 KCNJ1P48048 391 aa10.91□□□□□ -0.66
VPS25-203ENST00000589520 LILRA4P59901 499 aa10.91□□□□□ -0.66
VPS25-203ENST00000589520 SKOR1P84550 965 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms