RNA–Protein interactions for RNA: ENST00000580540.1

SREBF1-219, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-219ENST00000580540 TRPC7Q9HCX4 862 aa17.72■□□□□ 0.43
SREBF1-219ENST00000580540 NCANO14594 1321 aa17.72■□□□□ 0.43
SREBF1-219ENST00000580540 KANSL1LA0AUZ9 987 aa17.71■□□□□ 0.43
SREBF1-219ENST00000580540 F8VP50 259 aa17.71■□□□□ 0.43
SREBF1-219ENST00000580540 PSMA7O14818 248 aa17.71■□□□□ 0.43
SREBF1-219ENST00000580540 TRIM66O15016 1216 aa17.71■□□□□ 0.43
SREBF1-219ENST00000580540 LRRN2O75325 713 aa17.71■□□□□ 0.43
SREBF1-219ENST00000580540 PRAMEF12O95522 483 aa17.71■□□□□ 0.43
SREBF1-219ENST00000580540 ASS1P00966 412 aaKnown RBP17.71■□□□□ 0.43
SREBF1-219ENST00000580540 AVPR1AP37288 418 aa17.71■□□□□ 0.43
SREBF1-219ENST00000580540 PMS1P54277 932 aaKnown RBP17.71■□□□□ 0.43
SREBF1-219ENST00000580540 FKBP3Q00688 224 aaKnown RBP17.71■□□□□ 0.43
SREBF1-219ENST00000580540 COBLL1Q53SF7 1204 aa17.71■□□□□ 0.43
SREBF1-219ENST00000580540 ACOT1Q86TX2 421 aa17.71■□□□□ 0.43
SREBF1-219ENST00000580540 ELOA2Q8IYF1 753 aaPredicted RBP17.71■□□□□ 0.43
SREBF1-219ENST00000580540 CMTM8Q8IZV2 173 aa17.71■□□□□ 0.43
SREBF1-219ENST00000580540 DTWD2Q8NBA8 298 aa17.71■□□□□ 0.43
SREBF1-219ENST00000580540 TTC16Q8NEE8 873 aa17.71■□□□□ 0.43
SREBF1-219ENST00000580540 CSGALNACT1Q8TDX6 532 aa17.71■□□□□ 0.43
SREBF1-219ENST00000580540 DNASE1L2Q92874 299 aa17.71■□□□□ 0.43
SREBF1-219ENST00000580540 TNIP3Q96KP6 325 aa17.71■□□□□ 0.43
SREBF1-219ENST00000580540 TMEM8AQ9HCN3 771 aa17.71■□□□□ 0.43
SREBF1-219ENST00000580540 FAM86C1Q9NVL1 165 aa17.71■□□□□ 0.43
SREBF1-219ENST00000580540 FAM170BA6NMN3 283 aa17.7■□□□□ 0.42
SREBF1-219ENST00000580540 STX10O60499 249 aa17.7■□□□□ 0.42
SREBF1-219ENST00000580540 DDX6P26196 483 aaKnown RBP eCLIP17.7■□□□□ 0.421e-7■■■■■ 60
SREBF1-219ENST00000580540 NOP14P78316 857 aaKnown RBP17.7■□□□□ 0.42
SREBF1-219ENST00000580540 IFRD2Q12894 506 aaPredicted RBP17.7■□□□□ 0.42
SREBF1-219ENST00000580540 DCAF17Q5H9S7 520 aaPredicted RBP17.7■□□□□ 0.42
SREBF1-219ENST00000580540 KRT39Q6A163 491 aa17.7■□□□□ 0.42
SREBF1-219ENST00000580540 DENND5BQ6ZUT9 1274 aa17.7■□□□□ 0.42
SREBF1-219ENST00000580540 MON1AQ86VX9 555 aa17.7■□□□□ 0.42
SREBF1-219ENST00000580540 CCDC105Q8IYK2 499 aa17.7■□□□□ 0.42
SREBF1-219ENST00000580540 PJA1Q8NG27 643 aa17.7■□□□□ 0.42
SREBF1-219ENST00000580540 TTC8Q8TAM2 541 aa17.7■□□□□ 0.42
SREBF1-219ENST00000580540 TRMT2BQ96GJ1 504 aaKnown RBP17.7■□□□□ 0.42
SREBF1-219ENST00000580540 ZFYVE19Q96K21 471 aa17.7■□□□□ 0.42
SREBF1-219ENST00000580540 SPATA17Q96L03 361 aa17.7■□□□□ 0.42
SREBF1-219ENST00000580540 LRRC3BQ96PB8 259 aa17.7■□□□□ 0.42
SREBF1-219ENST00000580540 ELOVL4Q9GZR5 314 aa17.7■□□□□ 0.42
SREBF1-219ENST00000580540 ZMYM5Q9UJ78 669 aa17.7■□□□□ 0.42
SREBF1-219ENST00000580540 MTF2Q9Y483 593 aaPredicted RBP17.7■□□□□ 0.42
SREBF1-219ENST00000580540 COL4A3Q01955 1670 aa17.7■□□□□ 0.42
SREBF1-219ENST00000580540 ATP8B3O60423 1300 aa17.7■□□□□ 0.42
SREBF1-219ENST00000580540 WDFY4Q6ZS81 3184 aa17.69■□□□□ 0.42
SREBF1-219ENST00000580540 CHADO15335 359 aa17.69■□□□□ 0.42
SREBF1-219ENST00000580540 ABL1P00519 1130 aa17.69■□□□□ 0.42
SREBF1-219ENST00000580540 CD44P16070 742 aaKnown RBP17.69■□□□□ 0.42
SREBF1-219ENST00000580540 CD58P19256 250 aa17.69■□□□□ 0.42
SREBF1-219ENST00000580540 CCNE1P24864 410 aa17.69■□□□□ 0.42
SREBF1-219ENST00000580540 GTF2H1P32780 548 aa17.69■□□□□ 0.42
SREBF1-219ENST00000580540 ASPAP45381 313 aa17.69■□□□□ 0.42
SREBF1-219ENST00000580540 MXI1P50539 228 aa17.69■□□□□ 0.42
SREBF1-219ENST00000580540 KPNA1P52294 538 aaPredicted RBP17.69■□□□□ 0.42
SREBF1-219ENST00000580540 NDST1P52848 882 aa17.69■□□□□ 0.42
SREBF1-219ENST00000580540 CACNA2D1P54289 1103 aa17.69■□□□□ 0.42
SREBF1-219ENST00000580540 USP46P62068 366 aa17.69■□□□□ 0.42
SREBF1-219ENST00000580540 UBE2HP62256 183 aa17.69■□□□□ 0.42
SREBF1-219ENST00000580540 LRRC63Q05C16 580 aa17.69■□□□□ 0.42
SREBF1-219ENST00000580540 ENPEPQ07075 957 aa17.69■□□□□ 0.42
SREBF1-219ENST00000580540 CAMK4Q16566 473 aa17.69■□□□□ 0.42
SREBF1-219ENST00000580540 ZNF852Q6ZMS4 543 aa17.69■□□□□ 0.42
SREBF1-219ENST00000580540 CELF5Q8N6W0 485 aaKnown RBP17.69■□□□□ 0.42
SREBF1-219ENST00000580540 BPIFB1Q8TDL5 484 aa17.69■□□□□ 0.42
SREBF1-219ENST00000580540 DHTKD1Q96HY7 919 aaPredicted RBP17.69■□□□□ 0.42
SREBF1-219ENST00000580540 MYRFLQ96LU7 910 aa17.69■□□□□ 0.42
SREBF1-219ENST00000580540 IRF2BPLQ9H1B7 796 aa17.69■□□□□ 0.42
SREBF1-219ENST00000580540 APOBEC3GQ9HC16 384 aaKnown RBP17.69■□□□□ 0.42
SREBF1-219ENST00000580540 LTB4R2Q9NPC1 389 aa17.69■□□□□ 0.42
SREBF1-219ENST00000580540 NDRG2Q9UN36 371 aaKnown RBP17.69■□□□□ 0.42
SREBF1-219ENST00000580540 PIAS3Q9Y6X2 628 aa17.69■□□□□ 0.42
SREBF1-219ENST00000580540 TADA3O75528 432 aa17.68■□□□□ 0.42
SREBF1-219ENST00000580540 FCHO2Q0JRZ9 810 aa17.68■□□□□ 0.42
SREBF1-219ENST00000580540 ARHGAP29Q52LW3 1261 aa17.68■□□□□ 0.42
SREBF1-219ENST00000580540 NELFBQ8WX92 580 aa17.68■□□□□ 0.42
SREBF1-219ENST00000580540 C8orf48Q96LL4 319 aa17.68■□□□□ 0.42
SREBF1-219ENST00000580540 CYP2S1Q96SQ9 504 aa17.68■□□□□ 0.42
SREBF1-219ENST00000580540 DDX23Q9BUQ8 820 aaKnown RBP17.68■□□□□ 0.42
SREBF1-219ENST00000580540 THG1LQ9NWX6 298 aaKnown RBP17.68■□□□□ 0.42
SREBF1-219ENST00000580540 OBP2AQ9NY56 170 aa17.68■□□□□ 0.42
SREBF1-219ENST00000580540 TRPM5Q9NZQ8 1165 aa17.68■□□□□ 0.42
SREBF1-219ENST00000580540 HMGXB4Q9UGU5 601 aa17.68■□□□□ 0.42
SREBF1-219ENST00000580540 ARMCX3Q9UH62 379 aaPredicted RBP17.68■□□□□ 0.42
SREBF1-219ENST00000580540 CTNND2Q9UQB3 1225 aa17.68■□□□□ 0.42
SREBF1-219ENST00000580540 CCL26Q9Y258 94 aa17.68■□□□□ 0.42
SREBF1-219ENST00000580540 MRPS17Q9Y2R5 130 aaKnown RBP17.68■□□□□ 0.42
SREBF1-219ENST00000580540 TRAV19A0A0A6YYK7 116 aa17.67■□□□□ 0.42
SREBF1-219ENST00000580540 MAN2B1O00754 1011 aa17.67■□□□□ 0.42
SREBF1-219ENST00000580540 SLC16A3O15427 465 aaKnown RBP17.67■□□□□ 0.42
SREBF1-219ENST00000580540 CKMP06732 381 aa17.67■□□□□ 0.42
SREBF1-219ENST00000580540 CCDC130P13994 396 aa17.67■□□□□ 0.42
SREBF1-219ENST00000580540 TRIM21P19474 475 aaKnown RBP17.67■□□□□ 0.42
SREBF1-219ENST00000580540 TARSP26639 723 aaKnown RBP17.67■□□□□ 0.42
SREBF1-219ENST00000580540 WEE1P30291 646 aa17.67■□□□□ 0.42
SREBF1-219ENST00000580540 PPP1R2P41236 205 aa17.67■□□□□ 0.42
SREBF1-219ENST00000580540 MORC3Q14149 939 aa17.67■□□□□ 0.42
SREBF1-219ENST00000580540 CCDC40Q4G0X9 1142 aa17.67■□□□□ 0.42
SREBF1-219ENST00000580540 FAM35AQ86V20 835 aa17.67■□□□□ 0.42
SREBF1-219ENST00000580540 UNC93AQ86WB7 457 aa17.67■□□□□ 0.42
SREBF1-219ENST00000580540 SEMA4DQ92854 862 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms