RNA–Protein interactions for RNA: ENST00000573710.7

CACNA1A-202, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,569 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-202ENST00000573710 PKP1Q13835 747 aa16.44■□□□□ 0.22
CACNA1A-202ENST00000573710 MTFR1Q15390 333 aa16.44■□□□□ 0.22
CACNA1A-202ENST00000573710 FAM171BQ6P995 826 aa16.44■□□□□ 0.22
CACNA1A-202ENST00000573710 C10orf88Q9H8K7 445 aa16.44■□□□□ 0.22
CACNA1A-202ENST00000573710 VWA5AO00534 786 aa16.44■□□□□ 0.22
CACNA1A-202ENST00000573710 MSH4O15457 936 aa16.44■□□□□ 0.22
CACNA1A-202ENST00000573710 ZNF862O60290 1169 aa16.44■□□□□ 0.22
CACNA1A-202ENST00000573710 NMT2O60551 498 aa16.44■□□□□ 0.22
CACNA1A-202ENST00000573710 MMP1P03956 469 aa16.44■□□□□ 0.22
CACNA1A-202ENST00000573710 CYP2D6P10635 497 aa16.44■□□□□ 0.22
CACNA1A-202ENST00000573710 THPOP40225 353 aa16.44■□□□□ 0.22
CACNA1A-202ENST00000573710 PTPN12Q05209 780 aaKnown RBP16.44■□□□□ 0.22
CACNA1A-202ENST00000573710 MICALL2Q8IY33 904 aa16.44■□□□□ 0.22
CACNA1A-202ENST00000573710 XPO6Q96QU8 1125 aaKnown RBP16.44■□□□□ 0.22
CACNA1A-202ENST00000573710 THAP9Q9H5L6 903 aa16.44■□□□□ 0.22
CACNA1A-202ENST00000573710 PRKAG3Q9UGI9 489 aa16.44■□□□□ 0.22
CACNA1A-202ENST00000573710 TRMT6Q9UJA5 497 aaKnown RBP16.44■□□□□ 0.22
CACNA1A-202ENST00000573710 SAC3D1A6NKF1 404 aa16.44■□□□□ 0.22
CACNA1A-202ENST00000573710 BBOX1O75936 387 aa16.44■□□□□ 0.22
CACNA1A-202ENST00000573710 ALOX12P18054 663 aa16.44■□□□□ 0.22
CACNA1A-202ENST00000573710 TMEM179Q6ZVK1 233 aa16.44■□□□□ 0.22
CACNA1A-202ENST00000573710 PRRG4Q9BZD6 226 aa16.44■□□□□ 0.22
CACNA1A-202ENST00000573710 VIPAS39Q9H9C1 493 aa16.44■□□□□ 0.22
CACNA1A-202ENST00000573710 ZFYVE28Q9HCC9 887 aa16.44■□□□□ 0.22
CACNA1A-202ENST00000573710 EMSYQ7Z589 1322 aa16.43■□□□□ 0.22
CACNA1A-202ENST00000573710 IL12RB1P42701 662 aa16.43■□□□□ 0.22
CACNA1A-202ENST00000573710 GLB1LQ6UWU2 654 aa16.43■□□□□ 0.22
CACNA1A-202ENST00000573710 RELTQ969Z4 430 aa16.43■□□□□ 0.22
CACNA1A-202ENST00000573710 DHRS1Q96LJ7 313 aa16.43■□□□□ 0.22
CACNA1A-202ENST00000573710 KLHL32Q96NJ5 620 aa16.43■□□□□ 0.22
CACNA1A-202ENST00000573710 SOHLH2Q9NX45 425 aa16.43■□□□□ 0.22
CACNA1A-202ENST00000573710 ZMYM3Q14202 1370 aa16.43■□□□□ 0.22
CACNA1A-202ENST00000573710 EGFRP00533 1210 aa16.43■□□□□ 0.22
CACNA1A-202ENST00000573710 GRK4P32298 578 aa16.43■□□□□ 0.22
CACNA1A-202ENST00000573710 ATG16L2Q8NAA4 619 aa16.43■□□□□ 0.22
CACNA1A-202ENST00000573710 MS4A14Q96JA4 679 aa16.43■□□□□ 0.22
CACNA1A-202ENST00000573710 UNKQ9C0B0 810 aaKnown RBP16.43■□□□□ 0.22
CACNA1A-202ENST00000573710 ANTXR1Q9H6X2 564 aa16.43■□□□□ 0.22
CACNA1A-202ENST00000573710 MBD2Q9UBB5 411 aa16.43■□□□□ 0.22
CACNA1A-202ENST00000573710 ZNF222Q9UK12 451 aa16.43■□□□□ 0.22
CACNA1A-202ENST00000573710 GMNCA6NCL1 334 aa16.43■□□□□ 0.22
CACNA1A-202ENST00000573710 SERPINA3P01011 423 aa16.43■□□□□ 0.22
CACNA1A-202ENST00000573710 CYP24A1Q07973 514 aa16.43■□□□□ 0.22
CACNA1A-202ENST00000573710 PACS1Q6VY07 963 aa16.43■□□□□ 0.22
CACNA1A-202ENST00000573710 TRMT11Q7Z4G4 463 aaKnown RBP16.43■□□□□ 0.22
CACNA1A-202ENST00000573710 DAW1Q8N136 415 aa16.43■□□□□ 0.22
CACNA1A-202ENST00000573710 TNIP2Q8NFZ5 429 aa16.43■□□□□ 0.22
CACNA1A-202ENST00000573710 RAPGEF6Q8TEU7 1601 aa16.43■□□□□ 0.22
CACNA1A-202ENST00000573710 KPNA5O15131 536 aa16.43■□□□□ 0.22
CACNA1A-202ENST00000573710 MAP3K6O95382 1288 aa16.43■□□□□ 0.22
CACNA1A-202ENST00000573710 MYL4P12829 197 aa16.43■□□□□ 0.22
CACNA1A-202ENST00000573710 TPP2P29144 1249 aaPredicted RBP16.43■□□□□ 0.22
CACNA1A-202ENST00000573710 MAGEA10P43363 369 aaPredicted RBP16.43■□□□□ 0.22
CACNA1A-202ENST00000573710 TRADDQ15628 312 aa16.43■□□□□ 0.22
CACNA1A-202ENST00000573710 EDRF1Q3B7T1 1238 aa16.43■□□□□ 0.22
CACNA1A-202ENST00000573710 RASGRP2Q7LDG7 609 aa16.43■□□□□ 0.22
CACNA1A-202ENST00000573710 TMC4Q7Z404 712 aa16.43■□□□□ 0.22
CACNA1A-202ENST00000573710 RPRD1AQ96P16 312 aaPredicted RBP16.43■□□□□ 0.22
CACNA1A-202ENST00000573710 DNAJC5BQ9UF47 199 aa16.43■□□□□ 0.22
CACNA1A-202ENST00000573710 MORC2Q9Y6X9 1032 aaPredicted RBP16.43■□□□□ 0.22
CACNA1A-202ENST00000573710 CENPXA8MT69 81 aa16.43■□□□□ 0.22
CACNA1A-202ENST00000573710 CYP26A1O43174 497 aa16.43■□□□□ 0.22
CACNA1A-202ENST00000573710 RTN3O95197 1032 aaPredicted RBP16.43■□□□□ 0.22
CACNA1A-202ENST00000573710 CKMP06732 381 aa16.43■□□□□ 0.22
CACNA1A-202ENST00000573710 P3H1Q32P28 736 aa16.43■□□□□ 0.22
CACNA1A-202ENST00000573710 RGS18Q9NS28 235 aa16.43■□□□□ 0.22
CACNA1A-202ENST00000573710 ADAM30Q9UKF2 790 aa16.43■□□□□ 0.22
CACNA1A-202ENST00000573710 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.43■□□□□ 0.22
CACNA1A-202ENST00000573710 CHUKO15111 745 aa16.43■□□□□ 0.22
CACNA1A-202ENST00000573710 MAFKO60675 156 aa16.43■□□□□ 0.22
CACNA1A-202ENST00000573710 ABATP80404 500 aa16.43■□□□□ 0.22
CACNA1A-202ENST00000573710 ZNF177Q13360 481 aaPredicted RBP16.43■□□□□ 0.22
CACNA1A-202ENST00000573710 ARL10Q8N8L6 244 aa16.43■□□□□ 0.22
CACNA1A-202ENST00000573710 MRPL48Q96GC5 212 aaKnown RBP16.43■□□□□ 0.22
CACNA1A-202ENST00000573710 HERC5Q9UII4 1024 aaKnown RBP16.43■□□□□ 0.22
CACNA1A-202ENST00000573710 URB2Q14146 1524 aaKnown RBP16.43■□□□□ 0.22
CACNA1A-202ENST00000573710 SMIM22K7EJ46 135 aa16.42■□□□□ 0.22
CACNA1A-202ENST00000573710 MSANTD1Q6ZTZ1 278 aa16.42■□□□□ 0.22
CACNA1A-202ENST00000573710 PRKCBP05771 671 aa16.42■□□□□ 0.22
CACNA1A-202ENST00000573710 TRIP10Q15642 601 aa16.42■□□□□ 0.22
CACNA1A-202ENST00000573710 C16orf89Q6UX73 402 aa16.42■□□□□ 0.22
CACNA1A-202ENST00000573710 NECAB2Q7Z6G3 386 aa16.42■□□□□ 0.22
CACNA1A-202ENST00000573710 BRSK2Q8IWQ3 736 aa16.42■□□□□ 0.22
CACNA1A-202ENST00000573710 EAF2Q96CJ1 260 aaPredicted RBP16.42■□□□□ 0.22
CACNA1A-202ENST00000573710 RNF26Q9BY78 433 aaPredicted RBP16.42■□□□□ 0.22
CACNA1A-202ENST00000573710 CYP4F12Q9HCS2 524 aa16.42■□□□□ 0.22
CACNA1A-202ENST00000573710 DYRK1BQ9Y463 629 aa16.42■□□□□ 0.22
CACNA1A-202ENST00000573710 SCAIQ8N9R8 606 aa16.42■□□□□ 0.22
CACNA1A-202ENST00000573710 NOL6Q9H6R4 1146 aaKnown RBP16.42■□□□□ 0.22
CACNA1A-202ENST00000573710 LNPEPQ9UIQ6 1025 aa16.42■□□□□ 0.22
CACNA1A-202ENST00000573710 KYNUQ16719 465 aa16.42■□□□□ 0.22
CACNA1A-202ENST00000573710 ZYG11AQ6WRX3 759 aa16.42■□□□□ 0.22
CACNA1A-202ENST00000573710 QKIQ96PU8 341 aaKnown RBP eCLIP16.42■□□□□ 0.22
CACNA1A-202ENST00000573710 DDX47Q9H0S4 455 aaKnown RBP16.42■□□□□ 0.22
CACNA1A-202ENST00000573710 SH3BP4Q9P0V3 963 aa16.42■□□□□ 0.22
CACNA1A-202ENST00000573710 RUVBL2Q9Y230 463 aaKnown RBP16.42■□□□□ 0.22
CACNA1A-202ENST00000573710 CNPP09543 421 aaKnown RBP16.42■□□□□ 0.22
CACNA1A-202ENST00000573710 GNASQ5JWF2 1037 aa16.42■□□□□ 0.22
CACNA1A-202ENST00000573710 METTL21CQ5VZV1 264 aa16.42■□□□□ 0.22
CACNA1A-202ENST00000573710 KIF2BQ8N4N8 673 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms