RNA–Protein interactions for RNA: ENST00000571212.1

KARSP3-201, Transcript of lysyl-tRNA synthetase pseudogene 3, humanhuman

BASIC

Gene KARSP3, Length 1,504 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARSP3-201ENST00000571212 HOMER1Q86YM7 354 aa5.66□□□□□ -1.5
KARSP3-201ENST00000571212 FOXP4Q8IVH2 680 aaPredicted RBP5.66□□□□□ -1.5
KARSP3-201ENST00000571212 ZZZ3Q8IYH5 903 aa5.66□□□□□ -1.5
KARSP3-201ENST00000571212 EFHBQ8N7U6 833 aa5.66□□□□□ -1.5
KARSP3-201ENST00000571212 APPBP2Q92624 585 aa5.66□□□□□ -1.5
KARSP3-201ENST00000571212 NINJ1Q92982 152 aa5.66□□□□□ -1.5
KARSP3-201ENST00000571212 NEUROD6Q96NK8 337 aa5.66□□□□□ -1.5
KARSP3-201ENST00000571212 NRDE2Q9H7Z3 1164 aa5.66□□□□□ -1.5
KARSP3-201ENST00000571212 TXNRD2Q9NNW7 524 aa5.66□□□□□ -1.5
KARSP3-201ENST00000571212 ECHDC1Q9NTX5 307 aa5.66□□□□□ -1.5
KARSP3-201ENST00000571212 RAI14Q9P0K7 980 aa5.66□□□□□ -1.5
KARSP3-201ENST00000571212 RLFQ13129 1914 aa5.65□□□□□ -1.5
KARSP3-201ENST00000571212 MFAP3LO75121 409 aa5.65□□□□□ -1.5
KARSP3-201ENST00000571212 CDC45O75419 566 aa5.65□□□□□ -1.5
KARSP3-201ENST00000571212 FSBPO95073 299 aa5.65□□□□□ -1.5
KARSP3-201ENST00000571212 IFIT2P09913 472 aaKnown RBP5.65□□□□□ -1.5
KARSP3-201ENST00000571212 POU3F2P20265 443 aaPredicted RBP5.65□□□□□ -1.5
KARSP3-201ENST00000571212 MX1P20591 662 aa5.65□□□□□ -1.5
KARSP3-201ENST00000571212 CASRP41180 1078 aa5.65□□□□□ -1.5
KARSP3-201ENST00000571212 KPNA1P52294 538 aaPredicted RBP5.65□□□□□ -1.5
KARSP3-201ENST00000571212 INHBCP55103 352 aa5.65□□□□□ -1.5
KARSP3-201ENST00000571212 LRRC32Q14392 662 aa5.65□□□□□ -1.5
KARSP3-201ENST00000571212 LRRC26Q2I0M4 334 aa5.65□□□□□ -1.5
KARSP3-201ENST00000571212 CCDC158Q5M9N0 1113 aa5.65□□□□□ -1.5
KARSP3-201ENST00000571212 NAA16Q6N069 864 aaPredicted RBP5.65□□□□□ -1.5
KARSP3-201ENST00000571212 C16orf86Q6ZW13 317 aa5.65□□□□□ -1.5
KARSP3-201ENST00000571212 GPR142Q7Z601 462 aa5.65□□□□□ -1.5
KARSP3-201ENST00000571212 KIF18BQ86Y91 864 aa5.65□□□□□ -1.5
KARSP3-201ENST00000571212 CCAR1Q8IX12 1150 aaKnown RBP5.65□□□□□ -1.5
KARSP3-201ENST00000571212 MDGA1Q8NFP4 955 aa5.65□□□□□ -1.5
KARSP3-201ENST00000571212 PPP1R14CQ8TAE6 165 aa5.65□□□□□ -1.5
KARSP3-201ENST00000571212 HIST1H2AHQ96KK5 128 aa5.65□□□□□ -1.5
KARSP3-201ENST00000571212 HIST1H2AJQ99878 128 aa5.65□□□□□ -1.5
KARSP3-201ENST00000571212 TARS2Q9BW92 718 aaKnown RBP5.65□□□□□ -1.5
KARSP3-201ENST00000571212 RABGAP1Q9Y3P9 1069 aa5.65□□□□□ -1.5
KARSP3-201ENST00000571212 LTBP2Q14767 1821 aa5.65□□□□□ -1.51
KARSP3-201ENST00000571212 ALDH1A2O94788 518 aa5.64□□□□□ -1.51
KARSP3-201ENST00000571212 GSPT1P15170 499 aaKnown RBP5.64□□□□□ -1.51
KARSP3-201ENST00000571212 NR4A1P22736 598 aa5.64□□□□□ -1.51
KARSP3-201ENST00000571212 CCND3P30281 292 aaPredicted RBP5.64□□□□□ -1.51
KARSP3-201ENST00000571212 CCNA1P78396 465 aa5.64□□□□□ -1.51
KARSP3-201ENST00000571212 OS9Q13438 667 aaPredicted RBP5.64□□□□□ -1.51
KARSP3-201ENST00000571212 CCL14Q16627 93 aa5.64□□□□□ -1.51
KARSP3-201ENST00000571212 RABL3Q5HYI8 236 aa5.64□□□□□ -1.51
KARSP3-201ENST00000571212 MFSD14CQ5VZR4 134 aa5.64□□□□□ -1.51
KARSP3-201ENST00000571212 ZNF662Q6ZS27 426 aa5.64□□□□□ -1.51
KARSP3-201ENST00000571212 SYNPOQ8N3V7 929 aa5.64□□□□□ -1.51
KARSP3-201ENST00000571212 TGFBRAP1Q8WUH2 860 aa5.64□□□□□ -1.51
KARSP3-201ENST00000571212 ST8SIA2Q92186 375 aa5.64□□□□□ -1.51
KARSP3-201ENST00000571212 EDC3Q96F86 508 aaKnown RBP5.64□□□□□ -1.51
KARSP3-201ENST00000571212 C12orf42Q96LP6 360 aa5.64□□□□□ -1.51
KARSP3-201ENST00000571212 LBHD1Q9BQE6 289 aaPredicted RBP5.64□□□□□ -1.51
KARSP3-201ENST00000571212 FDXACB1Q9BRP7 624 aaPredicted RBP5.64□□□□□ -1.51
KARSP3-201ENST00000571212 PORCNQ9H237 461 aa5.64□□□□□ -1.51
KARSP3-201ENST00000571212 DNAJC18Q9H819 358 aa5.64□□□□□ -1.51
KARSP3-201ENST00000571212 AATFQ9NY61 560 aaKnown RBP eCLIP5.64□□□□□ -1.51
KARSP3-201ENST00000571212 ZBTB21Q9ULJ3 1066 aa5.64□□□□□ -1.51
KARSP3-201ENST00000571212 PCDHB6Q9Y5E3 794 aa5.64□□□□□ -1.51
KARSP3-201ENST00000571212 ZNFX1Q9P2E3 1918 aaKnown RBP5.64□□□□□ -1.51
KARSP3-201ENST00000571212 FLT1P17948 1338 aa5.64□□□□□ -1.51
KARSP3-201ENST00000571212 SMCHD1A6NHR9 2005 aa5.64□□□□□ -1.51
KARSP3-201ENST00000571212 PRSS38A1L453 326 aa5.64□□□□□ -1.51
KARSP3-201ENST00000571212 SLC15A5A6NIM6 579 aa5.64□□□□□ -1.51
KARSP3-201ENST00000571212 GRXCR1A8MXD5 290 aa5.64□□□□□ -1.51
KARSP3-201ENST00000571212 ERC2O15083 957 aa5.64□□□□□ -1.51
KARSP3-201ENST00000571212 HOXA3O43365 443 aaPredicted RBP5.64□□□□□ -1.51
KARSP3-201ENST00000571212 LY86O95711 162 aa5.64□□□□□ -1.51
KARSP3-201ENST00000571212 HLA-DOAP06340 250 aa5.64□□□□□ -1.51
KARSP3-201ENST00000571212 HOXC6P09630 235 aa5.64□□□□□ -1.51
KARSP3-201ENST00000571212 SHROOM1Q2M3G4 852 aaPredicted RBP5.64□□□□□ -1.51
KARSP3-201ENST00000571212 SDE2Q6IQ49 451 aa5.64□□□□□ -1.51
KARSP3-201ENST00000571212 MFSD5Q6N075 450 aa5.64□□□□□ -1.51
KARSP3-201ENST00000571212 ESPNLQ6ZVH7 1005 aa5.64□□□□□ -1.51
KARSP3-201ENST00000571212 PASD1Q8IV76 773 aa5.64□□□□□ -1.51
KARSP3-201ENST00000571212 MAPKAPK5Q8IW41 473 aa5.64□□□□□ -1.51
KARSP3-201ENST00000571212 RPUSD2Q8IZ73 545 aaKnown RBP5.64□□□□□ -1.51
KARSP3-201ENST00000571212 MSL3Q8N5Y2 521 aaKnown RBP5.64□□□□□ -1.51
KARSP3-201ENST00000571212 KBTBD3Q8NAB2 608 aa5.64□□□□□ -1.51
KARSP3-201ENST00000571212 LPAR1Q92633 364 aa5.64□□□□□ -1.51
KARSP3-201ENST00000571212 FERMT2Q96AC1 680 aa5.64□□□□□ -1.51
KARSP3-201ENST00000571212 GUCD1Q96NT3 240 aa5.64□□□□□ -1.51
KARSP3-201ENST00000571212 AGAP2Q99490 1192 aa5.64□□□□□ -1.51
KARSP3-201ENST00000571212 PAGR1Q9BTK6 254 aa5.64□□□□□ -1.51
KARSP3-201ENST00000571212 TTPALQ9BTX7 342 aa5.64□□□□□ -1.51
KARSP3-201ENST00000571212 ANO3Q9BYT9 981 aa5.64□□□□□ -1.51
KARSP3-201ENST00000571212 SENP6Q9GZR1 1112 aaPredicted RBP5.64□□□□□ -1.51
KARSP3-201ENST00000571212 ENKD1Q9H0I2 346 aa5.64□□□□□ -1.51
KARSP3-201ENST00000571212 TRPS1Q9UHF7 1281 aa5.64□□□□□ -1.51
KARSP3-201ENST00000571212 DDX20Q9UHI6 824 aaKnown RBP5.64□□□□□ -1.51
KARSP3-201ENST00000571212 ZNF236Q9UL36 1845 aa5.63□□□□□ -1.51
KARSP3-201ENST00000571212 DNM1LO00429 736 aa5.63□□□□□ -1.51
KARSP3-201ENST00000571212 MAFGO15525 162 aa5.63□□□□□ -1.51
KARSP3-201ENST00000571212 MTSS1O43312 755 aa5.63□□□□□ -1.51
KARSP3-201ENST00000571212 CNMDO75829 334 aa5.63□□□□□ -1.51
KARSP3-201ENST00000571212 PEX11BO96011 259 aa5.63□□□□□ -1.51
KARSP3-201ENST00000571212 GH2P01242 217 aa5.63□□□□□ -1.51
KARSP3-201ENST00000571212 PFKMP08237 780 aa5.63□□□□□ -1.51
KARSP3-201ENST00000571212 GNAT2P19087 354 aa5.63□□□□□ -1.51
KARSP3-201ENST00000571212 USP14P54578 494 aa5.63□□□□□ -1.51
KARSP3-201ENST00000571212 GRB14Q14449 540 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms