RNA–Protein interactions for RNA: ENST00000563911.5

HERPUD1-208, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 844 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-208ENST00000563911 TRPV1Q8NER1 839 aa6.98□□□□□ -1.29
HERPUD1-208ENST00000563911 MAFAQ8NHW3 353 aaPredicted RBP6.98□□□□□ -1.29
HERPUD1-208ENST00000563911 SMCR8Q8TEV9 937 aaPredicted RBP6.98□□□□□ -1.29
HERPUD1-208ENST00000563911 HOXB13Q92826 284 aaPredicted RBP6.98□□□□□ -1.29
HERPUD1-208ENST00000563911 MBD6Q96DN6 1003 aa6.98□□□□□ -1.29
HERPUD1-208ENST00000563911 RPL10LQ96L21 214 aaKnown RBP6.98□□□□□ -1.29
HERPUD1-208ENST00000563911 FAM193BQ96PV7 902 aaPredicted RBP6.98□□□□□ -1.29
HERPUD1-208ENST00000563911 P2RX7Q99572 595 aaKnown RBP6.98□□□□□ -1.29
HERPUD1-208ENST00000563911 IDI2Q9BXS1 227 aa6.98□□□□□ -1.29
HERPUD1-208ENST00000563911 PORCNQ9H237 461 aa6.98□□□□□ -1.29
HERPUD1-208ENST00000563911 SLC6A15Q9H2J7 730 aa6.98□□□□□ -1.29
HERPUD1-208ENST00000563911 MANSC1Q9H8J5 431 aa6.98□□□□□ -1.29
HERPUD1-208ENST00000563911 TDP1Q9NUW8 608 aa6.98□□□□□ -1.29
HERPUD1-208ENST00000563911 NR2E1Q9Y466 385 aa6.98□□□□□ -1.29
HERPUD1-208ENST00000563911 ARHGAP6O43182 974 aa6.97□□□□□ -1.29
HERPUD1-208ENST00000563911 FRAT2O75474 233 aaPredicted RBP6.97□□□□□ -1.29
HERPUD1-208ENST00000563911 JUNP05412 331 aaKnown RBP6.97□□□□□ -1.29
HERPUD1-208ENST00000563911 VSIG10L2P0DP72 767 aa6.97□□□□□ -1.29
HERPUD1-208ENST00000563911 ADORA1P30542 326 aa6.97□□□□□ -1.29
HERPUD1-208ENST00000563911 PHKA1P46020 1223 aa6.97□□□□□ -1.29
HERPUD1-208ENST00000563911 KCNC1P48547 511 aa6.97□□□□□ -1.29
HERPUD1-208ENST00000563911 ADCY7P51828 1080 aa6.97□□□□□ -1.29
HERPUD1-208ENST00000563911 HMGCS2P54868 508 aa6.97□□□□□ -1.29
HERPUD1-208ENST00000563911 RHBDL3P58872 404 aa6.97□□□□□ -1.29
HERPUD1-208ENST00000563911 DUSP2Q05923 314 aa6.97□□□□□ -1.29
HERPUD1-208ENST00000563911 CCDC157Q569K6 752 aa6.97□□□□□ -1.29
HERPUD1-208ENST00000563911 CAVIN4Q5BKX8 364 aa6.97□□□□□ -1.29
HERPUD1-208ENST00000563911 PPP4R4Q6NUP7 873 aa6.97□□□□□ -1.29
HERPUD1-208ENST00000563911 RSPH3Q86UC2 560 aa6.97□□□□□ -1.29
HERPUD1-208ENST00000563911 PPP1R35Q8TAP8 253 aa6.97□□□□□ -1.29
HERPUD1-208ENST00000563911 CCHCR1Q8TD31 782 aa6.97□□□□□ -1.29
HERPUD1-208ENST00000563911 RAB24Q969Q5 203 aa6.97□□□□□ -1.29
HERPUD1-208ENST00000563911 BCO1Q9HAY6 547 aa6.97□□□□□ -1.29
HERPUD1-208ENST00000563911 ARNT2Q9HBZ2 717 aa6.97□□□□□ -1.29
HERPUD1-208ENST00000563911 KMT5AQ9NQR1 393 aa6.97□□□□□ -1.29
HERPUD1-208ENST00000563911 MAN1C1Q9NR34 630 aa6.97□□□□□ -1.29
HERPUD1-208ENST00000563911 C9orf78Q9NZ63 289 aaPredicted RBP6.97□□□□□ -1.29
HERPUD1-208ENST00000563911 NCDNQ9UBB6 729 aa6.97□□□□□ -1.29
HERPUD1-208ENST00000563911 MORF4L1Q9UBU8 362 aa6.97□□□□□ -1.29
HERPUD1-208ENST00000563911 PCDHB1Q9Y5F3 818 aa6.97□□□□□ -1.29
HERPUD1-208ENST00000563911 GAKO14976 1311 aa6.97□□□□□ -1.29
HERPUD1-208ENST00000563911 REV3LO60673 3130 aa6.96□□□□□ -1.3
HERPUD1-208ENST00000563911 H3BML4 177 aa6.96□□□□□ -1.3
HERPUD1-208ENST00000563911 ENTPD3O75355 529 aa6.96□□□□□ -1.3
HERPUD1-208ENST00000563911 ITGA10O75578 1167 aa6.96□□□□□ -1.3
HERPUD1-208ENST00000563911 CNMDO75829 334 aa6.96□□□□□ -1.3
HERPUD1-208ENST00000563911 GASTP01350 101 aa6.96□□□□□ -1.3
HERPUD1-208ENST00000563911 ALDH2P05091 517 aa6.96□□□□□ -1.3
HERPUD1-208ENST00000563911 GYPEP15421 78 aa6.96□□□□□ -1.3
HERPUD1-208ENST00000563911 CAPN2P17655 700 aa6.96□□□□□ -1.3
HERPUD1-208ENST00000563911 SLC6A9P48067 706 aa6.96□□□□□ -1.3
HERPUD1-208ENST00000563911 GJA9P57773 515 aa6.96□□□□□ -1.3
HERPUD1-208ENST00000563911 DSC2Q02487 901 aa6.96□□□□□ -1.3
HERPUD1-208ENST00000563911 LLGL1Q15334 1064 aa6.96□□□□□ -1.3
HERPUD1-208ENST00000563911 RNF151Q2KHN1 245 aa6.96□□□□□ -1.3
HERPUD1-208ENST00000563911 THEMIS2Q5TEJ8 643 aa6.96□□□□□ -1.3
HERPUD1-208ENST00000563911 BORAQ6PGQ7 559 aa6.96□□□□□ -1.3
HERPUD1-208ENST00000563911 OR7D4Q8NG98 312 aa6.96□□□□□ -1.3
HERPUD1-208ENST00000563911 CLPTM1LQ96KA5 538 aa6.96□□□□□ -1.3
HERPUD1-208ENST00000563911 PDCD2LQ9BRP1 358 aa6.96□□□□□ -1.3
HERPUD1-208ENST00000563911 SENP6Q9GZR1 1112 aaPredicted RBP6.96□□□□□ -1.3
HERPUD1-208ENST00000563911 USP44Q9H0E7 712 aa6.96□□□□□ -1.3
HERPUD1-208ENST00000563911 FAM204AQ9H8W3 233 aa6.96□□□□□ -1.3
HERPUD1-208ENST00000563911 JADE2Q9NQC1 790 aa6.96□□□□□ -1.3
HERPUD1-208ENST00000563911 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.96□□□□□ -1.3
HERPUD1-208ENST00000563911 TRPS1Q9UHF7 1281 aa6.96□□□□□ -1.3
HERPUD1-208ENST00000563911 SIK3Q9Y2K2 1263 aa6.96□□□□□ -1.3
HERPUD1-208ENST00000563911 TTC28Q96AY4 2481 aa6.96□□□□□ -1.3
HERPUD1-208ENST00000563911 XIRP2A4UGR9 3374 aa6.96□□□□□ -1.3
HERPUD1-208ENST00000563911 LTBP2Q14767 1821 aa6.95□□□□□ -1.3
HERPUD1-208ENST00000563911 TRIM43BA6NCK2 446 aa6.95□□□□□ -1.3
HERPUD1-208ENST00000563911 SGTAO43765 313 aa6.95□□□□□ -1.3
HERPUD1-208ENST00000563911 UBXN7O94888 489 aa6.95□□□□□ -1.3
HERPUD1-208ENST00000563911 FTLP02792 175 aaPredicted RBP6.95□□□□□ -1.3
HERPUD1-208ENST00000563911 CRHR1P34998 444 aa6.95□□□□□ -1.3
HERPUD1-208ENST00000563911 PTPN7P35236 360 aa6.95□□□□□ -1.3
HERPUD1-208ENST00000563911 SREBF1P36956 1147 aa6.95□□□□□ -1.3
HERPUD1-208ENST00000563911 CDC42EP1Q00587 391 aa6.95□□□□□ -1.3
HERPUD1-208ENST00000563911 HGFACQ04756 655 aa6.95□□□□□ -1.3
HERPUD1-208ENST00000563911 PICALMQ13492 652 aa6.95□□□□□ -1.3
HERPUD1-208ENST00000563911 PUM3Q15397 648 aaKnown RBP6.95□□□□□ -1.3
HERPUD1-208ENST00000563911 GAGE13Q4V321 117 aa6.95□□□□□ -1.3
HERPUD1-208ENST00000563911 OVCH2Q7RTZ1 564 aa6.95□□□□□ -1.3
HERPUD1-208ENST00000563911 OR5M3Q8NGP4 307 aa6.95□□□□□ -1.3
HERPUD1-208ENST00000563911 RGMAQ96B86 450 aa6.95□□□□□ -1.3
HERPUD1-208ENST00000563911 TRIM43Q96BQ3 446 aaPredicted RBP6.95□□□□□ -1.3
HERPUD1-208ENST00000563911 CYFIP2Q96F07 1278 aa6.95□□□□□ -1.3
HERPUD1-208ENST00000563911 CGRRF1Q99675 332 aa6.95□□□□□ -1.3
HERPUD1-208ENST00000563911 CHMP4AQ9BY43 222 aa6.95□□□□□ -1.3
HERPUD1-208ENST00000563911 C12orf65Q9H3J6 166 aaKnown RBP6.95□□□□□ -1.3
HERPUD1-208ENST00000563911 LDAHQ9H6V9 325 aa6.95□□□□□ -1.3
HERPUD1-208ENST00000563911 DNAJC18Q9H819 358 aa6.95□□□□□ -1.3
HERPUD1-208ENST00000563911 PUF60Q9UHX1 559 aaKnown RBP6.95□□□□□ -1.3
HERPUD1-208ENST00000563911 LRRFIP2Q9Y608 721 aaKnown RBP6.95□□□□□ -1.3
HERPUD1-208ENST00000563911 AK9Q5TCS8 1911 aa6.95□□□□□ -1.3
HERPUD1-208ENST00000563911 MAST3O60307 1309 aa6.95□□□□□ -1.3
HERPUD1-208ENST00000563911 IL16Q14005 1332 aa6.95□□□□□ -1.3
HERPUD1-208ENST00000563911 KIF16BQ96L93 1317 aa6.95□□□□□ -1.3
HERPUD1-208ENST00000563911 LOC285556D6RIA3 1793 aa6.95□□□□□ -1.3
HERPUD1-208ENST00000563911 DOCK2Q92608 1830 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms