RNA–Protein interactions for RNA: ENST00000560051.1

HMGB3P26-201, Transcript of high mobility group box 3 pseudogene 26, humanhuman

BASIC

Gene HMGB3P26, Length 582 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P26-201ENST00000560051 PAPD4Q6PIY7 484 aaKnown RBP4.78□□□□□ -1.64
HMGB3P26-201ENST00000560051 IL27RAQ6UWB1 636 aa4.78□□□□□ -1.64
HMGB3P26-201ENST00000560051 PRR23BQ6ZRT6 265 aa4.78□□□□□ -1.64
HMGB3P26-201ENST00000560051 NCCRP1Q6ZVX7 275 aaPredicted RBP4.78□□□□□ -1.64
HMGB3P26-201ENST00000560051 PTCHD4Q6ZW05 846 aa4.78□□□□□ -1.64
HMGB3P26-201ENST00000560051 BRAPQ7Z569 592 aa4.78□□□□□ -1.64
HMGB3P26-201ENST00000560051 DNAJB7Q7Z6W7 309 aaPredicted RBP4.78□□□□□ -1.64
HMGB3P26-201ENST00000560051 MICU3Q86XE3 530 aa4.78□□□□□ -1.64
HMGB3P26-201ENST00000560051 SYTL1Q8IYJ3 562 aa4.78□□□□□ -1.64
HMGB3P26-201ENST00000560051 CCDC105Q8IYK2 499 aa4.78□□□□□ -1.64
HMGB3P26-201ENST00000560051 THNSL1Q8IYQ7 743 aa4.78□□□□□ -1.64
HMGB3P26-201ENST00000560051 KIAA0319LQ8IZA0 1049 aa4.78□□□□□ -1.64
HMGB3P26-201ENST00000560051 NIPA2Q8N8Q9 360 aa4.78□□□□□ -1.64
HMGB3P26-201ENST00000560051 SHCBP1Q8NEM2 672 aa4.78□□□□□ -1.64
HMGB3P26-201ENST00000560051 PIGOQ8TEQ8 1089 aa4.78□□□□□ -1.64
HMGB3P26-201ENST00000560051 SEPT8Q92599 483 aa4.78□□□□□ -1.64
HMGB3P26-201ENST00000560051 SLC35B4Q969S0 331 aa4.78□□□□□ -1.64
HMGB3P26-201ENST00000560051 ISL2Q96A47 359 aa4.78□□□□□ -1.64
HMGB3P26-201ENST00000560051 CABS1Q96KC9 395 aa4.78□□□□□ -1.64
HMGB3P26-201ENST00000560051 RPGRIP1Q96KN7 1286 aa4.78□□□□□ -1.64
HMGB3P26-201ENST00000560051 PPP1R13BQ96KQ4 1090 aa4.78□□□□□ -1.64
HMGB3P26-201ENST00000560051 TMEM237Q96Q45 408 aa4.78□□□□□ -1.64
HMGB3P26-201ENST00000560051 YME1L1Q96TA2 773 aa4.78□□□□□ -1.64
HMGB3P26-201ENST00000560051 CGREF1Q99674 301 aa4.78□□□□□ -1.64
HMGB3P26-201ENST00000560051 EMILIN2Q9BXX0 1053 aa4.78□□□□□ -1.64
HMGB3P26-201ENST00000560051 ACPTQ9BZG2 426 aa4.78□□□□□ -1.64
HMGB3P26-201ENST00000560051 B3GNT4Q9C0J1 378 aa4.78□□□□□ -1.64
HMGB3P26-201ENST00000560051 SENP6Q9GZR1 1112 aaPredicted RBP4.78□□□□□ -1.64
HMGB3P26-201ENST00000560051 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.78□□□□□ -1.64
HMGB3P26-201ENST00000560051 ZCWPW1Q9H0M4 648 aa4.78□□□□□ -1.64
HMGB3P26-201ENST00000560051 VPS16Q9H269 839 aa4.78□□□□□ -1.64
HMGB3P26-201ENST00000560051 GHITMQ9H3K2 345 aa4.78□□□□□ -1.64
HMGB3P26-201ENST00000560051 HAUS4Q9H6D7 363 aa4.78□□□□□ -1.64
HMGB3P26-201ENST00000560051 ANTXR1Q9H6X2 564 aa4.78□□□□□ -1.64
HMGB3P26-201ENST00000560051 CLK4Q9HAZ1 481 aaKnown RBP4.78□□□□□ -1.64
HMGB3P26-201ENST00000560051 POLE3Q9NRF9 147 aa4.78□□□□□ -1.64
HMGB3P26-201ENST00000560051 SDHAF3Q9NRP4 125 aa4.78□□□□□ -1.64
HMGB3P26-201ENST00000560051 ATAD3AQ9NVI7 634 aa4.78□□□□□ -1.64
HMGB3P26-201ENST00000560051 GPRC5BQ9NZH0 403 aa4.78□□□□□ -1.64
HMGB3P26-201ENST00000560051 FETUBQ9UGM5 382 aa4.78□□□□□ -1.64
HMGB3P26-201ENST00000560051 POLHQ9Y253 713 aa4.78□□□□□ -1.64
HMGB3P26-201ENST00000560051 C15orf41Q9Y2V0 281 aa4.78□□□□□ -1.64
HMGB3P26-201ENST00000560051 PCDHB5Q9Y5E4 795 aa4.78□□□□□ -1.64
HMGB3P26-201ENST00000560051 PCDHGA9Q9Y5G4 932 aaKnown RBP4.78□□□□□ -1.64
HMGB3P26-201ENST00000560051 PCDHGA8Q9Y5G5 932 aa4.78□□□□□ -1.64
HMGB3P26-201ENST00000560051 PCDHGA7Q9Y5G6 932 aa4.78□□□□□ -1.64
HMGB3P26-201ENST00000560051 PCDHGA6Q9Y5G7 932 aa4.78□□□□□ -1.64
HMGB3P26-201ENST00000560051 PCDHGA3Q9Y5H0 932 aa4.78□□□□□ -1.64
HMGB3P26-201ENST00000560051 PCDHGA2Q9Y5H1 932 aa4.78□□□□□ -1.64
HMGB3P26-201ENST00000560051 PCDHA5Q9Y5H7 936 aa4.78□□□□□ -1.64
HMGB3P26-201ENST00000560051 PTPRGP23470 1445 aa4.78□□□□□ -1.64
HMGB3P26-201ENST00000560051 NCANO14594 1321 aa4.77□□□□□ -1.65
HMGB3P26-201ENST00000560051 TRAV6A0A075B6T7 132 aa4.77□□□□□ -1.65
HMGB3P26-201ENST00000560051 A0A087WV62 115 aa4.77□□□□□ -1.65
HMGB3P26-201ENST00000560051 TRAV20A0A0B4J274 112 aa4.77□□□□□ -1.65
HMGB3P26-201ENST00000560051 A0A1W2PQU0 124 aa4.77□□□□□ -1.65
HMGB3P26-201ENST00000560051 PI4KAP2A4QPH2 592 aa4.77□□□□□ -1.65
HMGB3P26-201ENST00000560051 K7EPI3 171 aa4.77□□□□□ -1.65
HMGB3P26-201ENST00000560051 PER2O15055 1255 aa4.77□□□□□ -1.65
HMGB3P26-201ENST00000560051 IPO13O94829 963 aaKnown RBP4.77□□□□□ -1.65
HMGB3P26-201ENST00000560051 KCNH1O95259 989 aa4.77□□□□□ -1.65
HMGB3P26-201ENST00000560051 JMJD7P0C870 316 aa4.77□□□□□ -1.65
HMGB3P26-201ENST00000560051 ALOX15P16050 662 aaPredicted RBP4.77□□□□□ -1.65
HMGB3P26-201ENST00000560051 DNAJB1P25685 340 aa4.77□□□□□ -1.65
HMGB3P26-201ENST00000560051 HNF1BP35680 557 aa4.77□□□□□ -1.65
HMGB3P26-201ENST00000560051 TECP42680 631 aa4.77□□□□□ -1.65
HMGB3P26-201ENST00000560051 POLE2P56282 527 aa4.77□□□□□ -1.65
HMGB3P26-201ENST00000560051 TGFB2P61812 414 aa4.77□□□□□ -1.65
HMGB3P26-201ENST00000560051 ERVK-24P63145 666 aa4.77□□□□□ -1.65
HMGB3P26-201ENST00000560051 NOP14P78316 857 aaKnown RBP4.77□□□□□ -1.65
HMGB3P26-201ENST00000560051 NKX3-2P78367 333 aa4.77□□□□□ -1.65
HMGB3P26-201ENST00000560051 CYP4F8P98187 520 aa4.77□□□□□ -1.65
HMGB3P26-201ENST00000560051 PPARDQ03181 441 aa4.77□□□□□ -1.65
HMGB3P26-201ENST00000560051 KLF1Q13351 362 aaPredicted RBP4.77□□□□□ -1.65
HMGB3P26-201ENST00000560051 MTX1Q13505 466 aa4.77□□□□□ -1.65
HMGB3P26-201ENST00000560051 RIPK1Q13546 671 aa4.77□□□□□ -1.65
HMGB3P26-201ENST00000560051 LASP1Q14847 261 aaKnown RBP4.77□□□□□ -1.65
HMGB3P26-201ENST00000560051 NCAPHQ15003 741 aa4.77□□□□□ -1.65
HMGB3P26-201ENST00000560051 SPCS2Q15005 226 aa4.77□□□□□ -1.65
HMGB3P26-201ENST00000560051 SART3Q15020 963 aaKnown RBP4.77□□□□□ -1.65
HMGB3P26-201ENST00000560051 NCF4Q15080 339 aa4.77□□□□□ -1.65
HMGB3P26-201ENST00000560051 STK38Q15208 465 aa4.77□□□□□ -1.65
HMGB3P26-201ENST00000560051 HADHQ16836 314 aaKnown RBP4.77□□□□□ -1.65
HMGB3P26-201ENST00000560051 RGS21Q2M5E4 152 aa4.77□□□□□ -1.65
HMGB3P26-201ENST00000560051 LETM2Q2VYF4 491 aa4.77□□□□□ -1.65
HMGB3P26-201ENST00000560051 MAJINQ3KP22 176 aa4.77□□□□□ -1.65
HMGB3P26-201ENST00000560051 ADCK5Q3MIX3 580 aa4.77□□□□□ -1.65
HMGB3P26-201ENST00000560051 Q3ZCU0 254 aa4.77□□□□□ -1.65
HMGB3P26-201ENST00000560051 NAIF1Q69YI7 327 aaPredicted RBP4.77□□□□□ -1.65
HMGB3P26-201ENST00000560051 TWF2Q6IBS0 349 aaKnown RBP4.77□□□□□ -1.65
HMGB3P26-201ENST00000560051 ERICH5Q6P6B1 374 aa4.77□□□□□ -1.65
HMGB3P26-201ENST00000560051 TMEM154Q6P9G4 183 aa4.77□□□□□ -1.65
HMGB3P26-201ENST00000560051 VHLLQ6RSH7 139 aa4.77□□□□□ -1.65
HMGB3P26-201ENST00000560051 REC114Q7Z4M0 266 aa4.77□□□□□ -1.65
HMGB3P26-201ENST00000560051 SLFN11Q7Z7L1 901 aa4.77□□□□□ -1.65
HMGB3P26-201ENST00000560051 CDH24Q86UP0 819 aa4.77□□□□□ -1.65
HMGB3P26-201ENST00000560051 VPS36Q86VN1 386 aa4.77□□□□□ -1.65
HMGB3P26-201ENST00000560051 TMEM200AQ86VY9 491 aa4.77□□□□□ -1.65
HMGB3P26-201ENST00000560051 ERO1BQ86YB8 467 aa4.77□□□□□ -1.65
HMGB3P26-201ENST00000560051 WDR49Q8IV35 697 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms