RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 MMRN1Q13201 1228 aa12.1□□□□□ -0.47
C11orf54-214ENST00000540113 AMHR2Q16671 573 aa12.1□□□□□ -0.47
C11orf54-214ENST00000540113 ZNF667Q5HYK9 610 aa12.1□□□□□ -0.47
C11orf54-214ENST00000540113 FNBP1LQ5T0N5 605 aa12.1□□□□□ -0.47
C11orf54-214ENST00000540113 LDLRAD1Q5T700 205 aa12.1□□□□□ -0.47
C11orf54-214ENST00000540113 PNMA8AQ86V59 439 aaPredicted RBP12.1□□□□□ -0.47
C11orf54-214ENST00000540113 FAM228AQ86W67 206 aa12.1□□□□□ -0.47
C11orf54-214ENST00000540113 XYLT1Q86Y38 959 aa12.1□□□□□ -0.47
C11orf54-214ENST00000540113 UNC45BQ8IWX7 931 aa12.1□□□□□ -0.47
C11orf54-214ENST00000540113 LINC01465Q8N7H1 131 aa12.1□□□□□ -0.47
C11orf54-214ENST00000540113 SLC4A11Q8NBS3 891 aa12.1□□□□□ -0.47
C11orf54-214ENST00000540113 SHCBP1Q8NEM2 672 aa12.1□□□□□ -0.47
C11orf54-214ENST00000540113 PIWIL1Q96J94 861 aaKnown RBP12.1□□□□□ -0.47
C11orf54-214ENST00000540113 RMDN2Q96LZ7 410 aa12.1□□□□□ -0.47
C11orf54-214ENST00000540113 FDXACB1Q9BRP7 624 aaPredicted RBP12.1□□□□□ -0.47
C11orf54-214ENST00000540113 CXCL16Q9H2A7 254 aa12.1□□□□□ -0.47
C11orf54-214ENST00000540113 C12orf65Q9H3J6 166 aaKnown RBP12.1□□□□□ -0.47
C11orf54-214ENST00000540113 PCDHGC3Q9UN70 934 aa12.1□□□□□ -0.47
C11orf54-214ENST00000540113 USP15Q9Y4E8 981 aaPredicted RBP12.1□□□□□ -0.47
C11orf54-214ENST00000540113 TCEA3O75764 348 aa12.1□□□□□ -0.47
C11orf54-214ENST00000540113 STAG3L1P0CL83 205 aa12.1□□□□□ -0.47
C11orf54-214ENST00000540113 KRT15P19012 456 aa12.1□□□□□ -0.47
C11orf54-214ENST00000540113 KDELR1P24390 212 aa12.1□□□□□ -0.47
C11orf54-214ENST00000540113 CDH5P33151 784 aaPredicted RBP12.1□□□□□ -0.47
C11orf54-214ENST00000540113 CTCFP49711 727 aaPredicted RBP12.1□□□□□ -0.47
C11orf54-214ENST00000540113 YWHAEP62258 255 aaKnown RBP12.1□□□□□ -0.47
C11orf54-214ENST00000540113 LMNB2Q03252 620 aa12.1□□□□□ -0.47
C11orf54-214ENST00000540113 PPP1R2P3Q6NXS1 205 aa12.1□□□□□ -0.47
C11orf54-214ENST00000540113 PRCCQ92733 491 aaPredicted RBP12.1□□□□□ -0.47
C11orf54-214ENST00000540113 CFAP57Q96MR6 1250 aa12.1□□□□□ -0.47
C11orf54-214ENST00000540113 CALN1Q9BXU9 219 aa12.1□□□□□ -0.47
C11orf54-214ENST00000540113 NKIRAS1Q9NYS0 192 aa12.1□□□□□ -0.47
C11orf54-214ENST00000540113 ERAP1Q9NZ08 941 aa12.1□□□□□ -0.47
C11orf54-214ENST00000540113 GRID1Q9ULK0 1009 aa12.1□□□□□ -0.47
C11orf54-214ENST00000540113 TRIM33Q9UPN9 1127 aa12.1□□□□□ -0.47
C11orf54-214ENST00000540113 ASB14A6NK59 587 aa12.09□□□□□ -0.47
C11orf54-214ENST00000540113 SIGLEC16A6NMB1 481 aa12.09□□□□□ -0.47
C11orf54-214ENST00000540113 M0QYV0 167 aa12.09□□□□□ -0.47
C11orf54-214ENST00000540113 MICAL2O94851 1124 aa12.09□□□□□ -0.47
C11orf54-214ENST00000540113 MAP3K6O95382 1288 aa12.09□□□□□ -0.47
C11orf54-214ENST00000540113 GHRP10912 638 aa12.09□□□□□ -0.47
C11orf54-214ENST00000540113 GPX6P59796 221 aa12.09□□□□□ -0.47
C11orf54-214ENST00000540113 MGAT5Q09328 741 aa12.09□□□□□ -0.47
C11orf54-214ENST00000540113 SNAPC2Q13487 334 aa12.09□□□□□ -0.47
C11orf54-214ENST00000540113 CDO1Q16878 200 aa12.09□□□□□ -0.47
C11orf54-214ENST00000540113 ZNF792Q3KQV3 632 aa12.09□□□□□ -0.47
C11orf54-214ENST00000540113 LRRC38Q5VT99 294 aa12.09□□□□□ -0.47
C11orf54-214ENST00000540113 MAP1SQ66K74 1059 aaPredicted RBP12.09□□□□□ -0.47
C11orf54-214ENST00000540113 SPATA21Q7Z572 469 aa12.09□□□□□ -0.47
C11orf54-214ENST00000540113 RFX6Q8HWS3 928 aa12.09□□□□□ -0.47
C11orf54-214ENST00000540113 PARP9Q8IXQ6 854 aa12.09□□□□□ -0.47
C11orf54-214ENST00000540113 KCTD6Q8NC69 237 aa12.09□□□□□ -0.47
C11orf54-214ENST00000540113 CXorf38Q8TB03 319 aa12.09□□□□□ -0.47
C11orf54-214ENST00000540113 SLC35B2Q8TB61 432 aa12.09□□□□□ -0.47
C11orf54-214ENST00000540113 ZNF518BQ9C0D4 1074 aa12.09□□□□□ -0.47
C11orf54-214ENST00000540113 TRABDQ9H4I3 376 aa12.09□□□□□ -0.47
C11orf54-214ENST00000540113 DDX56Q9NY93 547 aaKnown RBP12.09□□□□□ -0.47
C11orf54-214ENST00000540113 SLC12A4Q9UP95 1085 aa12.09□□□□□ -0.47
C11orf54-214ENST00000540113 LOC102724159A0A0B4J2E5 919 aa12.09□□□□□ -0.47
C11orf54-214ENST00000540113 ZNF286BP0CG31 522 aa12.09□□□□□ -0.47
C11orf54-214ENST00000540113 TAC1P20366 129 aa12.09□□□□□ -0.47
C11orf54-214ENST00000540113 MIPP30301 263 aa12.09□□□□□ -0.47
C11orf54-214ENST00000540113 POLR2BP30876 1174 aaKnown RBP12.09□□□□□ -0.47
C11orf54-214ENST00000540113 RPA3P35244 121 aaPredicted RBP12.09□□□□□ -0.47
C11orf54-214ENST00000540113 RPL22P35268 128 aaKnown RBP12.09□□□□□ -0.47
C11orf54-214ENST00000540113 KCNJ2P63252 427 aa12.09□□□□□ -0.47
C11orf54-214ENST00000540113 DNAJC3Q13217 504 aa12.09□□□□□ -0.47
C11orf54-214ENST00000540113 PWP2Q15269 919 aaKnown RBP12.09□□□□□ -0.47
C11orf54-214ENST00000540113 C15orf59Q2T9L4 293 aaPredicted RBP12.09□□□□□ -0.47
C11orf54-214ENST00000540113 TRABD2AQ86V40 505 aa12.09□□□□□ -0.47
C11orf54-214ENST00000540113 KIF2BQ8N4N8 673 aa12.09□□□□□ -0.47
C11orf54-214ENST00000540113 FAM71DQ8N9W8 422 aa12.09□□□□□ -0.47
C11orf54-214ENST00000540113 CPT1BQ92523 772 aa12.09□□□□□ -0.47
C11orf54-214ENST00000540113 HEXIM2Q96MH2 286 aaKnown RBP12.09□□□□□ -0.47
C11orf54-214ENST00000540113 PEBP4Q96S96 227 aa12.09□□□□□ -0.47
C11orf54-214ENST00000540113 KLF6Q99612 283 aaPredicted RBP12.09□□□□□ -0.47
C11orf54-214ENST00000540113 WDR83Q9BRX9 315 aaKnown RBP12.09□□□□□ -0.47
C11orf54-214ENST00000540113 NFKBIZQ9BYH8 718 aa12.09□□□□□ -0.47
C11orf54-214ENST00000540113 BCO2Q9BYV7 579 aa12.09□□□□□ -0.47
C11orf54-214ENST00000540113 PDZD7Q9H5P4 517 aa12.09□□□□□ -0.47
C11orf54-214ENST00000540113 SLCO1B3Q9NPD5 702 aa12.09□□□□□ -0.47
C11orf54-214ENST00000540113 DRG1Q9Y295 367 aaKnown RBP12.09□□□□□ -0.47
C11orf54-214ENST00000540113 GOLGA8RI6L899 631 aa12.08□□□□□ -0.48
C11orf54-214ENST00000540113 DNAJC8O75937 253 aaPredicted RBP12.08□□□□□ -0.48
C11orf54-214ENST00000540113 ITGAVP06756 1048 aa12.08□□□□□ -0.48
C11orf54-214ENST00000540113 ADORA2AP29274 412 aa12.08□□□□□ -0.48
C11orf54-214ENST00000540113 ELF3P78545 371 aaPredicted RBP12.08□□□□□ -0.48
C11orf54-214ENST00000540113 PTPN11Q06124 597 aaPredicted RBP12.08□□□□□ -0.48
C11orf54-214ENST00000540113 XRCC4Q13426 336 aa12.08□□□□□ -0.48
C11orf54-214ENST00000540113 ZNF484Q5JVG2 852 aa12.08□□□□□ -0.48
C11orf54-214ENST00000540113 TRNP1Q6NT89 227 aa12.08□□□□□ -0.48
C11orf54-214ENST00000540113 DRICH1Q6PGQ1 229 aaPredicted RBP12.08□□□□□ -0.48
C11orf54-214ENST00000540113 ARHGEF18Q6ZSZ5 1173 aa12.08□□□□□ -0.48
C11orf54-214ENST00000540113 ZC3H18Q86VM9 953 aaKnown RBP12.08□□□□□ -0.48
C11orf54-214ENST00000540113 RELL1Q8IUW5 271 aa12.08□□□□□ -0.48
C11orf54-214ENST00000540113 FITM2Q8N6M3 262 aa12.08□□□□□ -0.48
C11orf54-214ENST00000540113 NIPA2Q8N8Q9 360 aa12.08□□□□□ -0.48
C11orf54-214ENST00000540113 C12orf29Q8N999 325 aa12.08□□□□□ -0.48
C11orf54-214ENST00000540113 AFG1LQ8WV93 481 aa12.08□□□□□ -0.48
C11orf54-214ENST00000540113 NKD2Q969F2 451 aaPredicted RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 120.4 ms