RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 LYVE1Q9Y5Y7 322 aa3.98□□□□□ -1.77
HMGB1P22-201ENST00000505315 ZFP37Q9Y6Q3 630 aaPredicted RBP3.98□□□□□ -1.77
HMGB1P22-201ENST00000505315 FAM170BA6NMN3 283 aa3.97□□□□□ -1.77
HMGB1P22-201ENST00000505315 ZNF785A8K8V0 405 aa3.97□□□□□ -1.77
HMGB1P22-201ENST00000505315 H0Y626 953 aa3.97□□□□□ -1.77
HMGB1P22-201ENST00000505315 J3KTA2 159 aa3.97□□□□□ -1.77
HMGB1P22-201ENST00000505315 M0QYG6 137 aa3.97□□□□□ -1.77
HMGB1P22-201ENST00000505315 ZSCAN9O15535 394 aaPredicted RBP3.97□□□□□ -1.77
HMGB1P22-201ENST00000505315 GUCY1B2O75343 617 aa3.97□□□□□ -1.77
HMGB1P22-201ENST00000505315 SEC24DO94855 1032 aaPredicted RBP3.97□□□□□ -1.77
HMGB1P22-201ENST00000505315 CCNDBP1O95273 360 aa3.97□□□□□ -1.77
HMGB1P22-201ENST00000505315 IGHDP01880 384 aa3.97□□□□□ -1.77
HMGB1P22-201ENST00000505315 MT-ND3P03897 115 aa3.97□□□□□ -1.77
HMGB1P22-201ENST00000505315 CLEC3BP05452 202 aa3.97□□□□□ -1.77
HMGB1P22-201ENST00000505315 TPM2P07951 284 aa3.97□□□□□ -1.77
HMGB1P22-201ENST00000505315 MSL3P1P0C860 447 aa3.97□□□□□ -1.77
HMGB1P22-201ENST00000505315 UBL4AP11441 157 aa3.97□□□□□ -1.77
HMGB1P22-201ENST00000505315 LAMP2P13473 410 aa3.97□□□□□ -1.77
HMGB1P22-201ENST00000505315 ATF7P17544 494 aaPredicted RBP3.97□□□□□ -1.77
HMGB1P22-201ENST00000505315 PFKLP17858 780 aa3.97□□□□□ -1.77
HMGB1P22-201ENST00000505315 SAT1P21673 171 aa3.97□□□□□ -1.77
HMGB1P22-201ENST00000505315 PCSK1P29120 753 aa3.97□□□□□ -1.77
HMGB1P22-201ENST00000505315 EEF1DP29692 281 aaKnown RBP3.97□□□□□ -1.77
HMGB1P22-201ENST00000505315 GLRBP48167 497 aa3.97□□□□□ -1.77
HMGB1P22-201ENST00000505315 SLC11A2P49281 568 aa3.97□□□□□ -1.77
HMGB1P22-201ENST00000505315 MCM2P49736 904 aa3.97□□□□□ -1.77
HMGB1P22-201ENST00000505315 CYP27A1Q02318 531 aa3.97□□□□□ -1.77
HMGB1P22-201ENST00000505315 MVKQ03426 396 aa3.97□□□□□ -1.77
HMGB1P22-201ENST00000505315 RNASELQ05823 741 aaKnown RBP3.97□□□□□ -1.77
HMGB1P22-201ENST00000505315 EPS8Q12929 822 aa3.97□□□□□ -1.77
HMGB1P22-201ENST00000505315 EIF2B5Q13144 721 aaKnown RBP3.97□□□□□ -1.77
HMGB1P22-201ENST00000505315 KCNAB1Q14722 419 aa3.97□□□□□ -1.77
HMGB1P22-201ENST00000505315 GRIK4Q16099 956 aa3.97□□□□□ -1.77
HMGB1P22-201ENST00000505315 NKPD1Q17RQ9 610 aa3.97□□□□□ -1.77
HMGB1P22-201ENST00000505315 SLC5A9Q2M3M2 681 aa3.97□□□□□ -1.77
HMGB1P22-201ENST00000505315 TRIM71Q2Q1W2 868 aaKnown RBP3.97□□□□□ -1.77
HMGB1P22-201ENST00000505315 MST1LQ2TV78 715 aa3.97□□□□□ -1.77
HMGB1P22-201ENST00000505315 MMEL1Q495T6 779 aa3.97□□□□□ -1.77
HMGB1P22-201ENST00000505315 DUSP28Q4G0W2 176 aa3.97□□□□□ -1.77
HMGB1P22-201ENST00000505315 RNFT1Q5M7Z0 435 aa3.97□□□□□ -1.77
HMGB1P22-201ENST00000505315 EMC10Q5UCC4 262 aa3.97□□□□□ -1.77
HMGB1P22-201ENST00000505315 PLAG1Q6DJT9 500 aa3.97□□□□□ -1.77
HMGB1P22-201ENST00000505315 VASNQ6EMK4 673 aa3.97□□□□□ -1.77
HMGB1P22-201ENST00000505315 MFSD5Q6N075 450 aa3.97□□□□□ -1.77
HMGB1P22-201ENST00000505315 GALNT18Q6P9A2 607 aa3.97□□□□□ -1.77
HMGB1P22-201ENST00000505315 ZDHHC24Q6UX98 284 aa3.97□□□□□ -1.77
HMGB1P22-201ENST00000505315 KIAA0408Q6ZU52 694 aa3.97□□□□□ -1.77
HMGB1P22-201ENST00000505315 OTOP2Q7RTS6 562 aa3.97□□□□□ -1.77
HMGB1P22-201ENST00000505315 ANKS1BQ7Z6G8 1248 aa3.97□□□□□ -1.77
HMGB1P22-201ENST00000505315 SLFN11Q7Z7L1 901 aa3.97□□□□□ -1.77
HMGB1P22-201ENST00000505315 KRT73Q86Y46 540 aa3.97□□□□□ -1.77
HMGB1P22-201ENST00000505315 THNSL1Q8IYQ7 743 aa3.97□□□□□ -1.77
HMGB1P22-201ENST00000505315 USP38Q8NB14 1042 aa3.97□□□□□ -1.77
HMGB1P22-201ENST00000505315 REPS2Q8NFH8 660 aa3.97□□□□□ -1.77
HMGB1P22-201ENST00000505315 PPP1R14CQ8TAE6 165 aa3.97□□□□□ -1.77
HMGB1P22-201ENST00000505315 SCFD2Q8WU76 684 aa3.97□□□□□ -1.77
HMGB1P22-201ENST00000505315 HOXB13Q92826 284 aaPredicted RBP3.97□□□□□ -1.77
HMGB1P22-201ENST00000505315 SIPA1Q96FS4 1042 aa3.97□□□□□ -1.77
HMGB1P22-201ENST00000505315 FAM46AQ96IP4 442 aaKnown RBP3.97□□□□□ -1.77
HMGB1P22-201ENST00000505315 BTBD2Q9BX70 525 aa3.97□□□□□ -1.77
HMGB1P22-201ENST00000505315 EDEM3Q9BZQ6 932 aa3.97□□□□□ -1.77
HMGB1P22-201ENST00000505315 TWSG1Q9GZX9 223 aa3.97□□□□□ -1.77
HMGB1P22-201ENST00000505315 USP44Q9H0E7 712 aa3.97□□□□□ -1.77
HMGB1P22-201ENST00000505315 C11orf54Q9H0W9 315 aaPredicted RBP3.97□□□□□ -1.77
HMGB1P22-201ENST00000505315 RMI1Q9H9A7 625 aa3.97□□□□□ -1.77
HMGB1P22-201ENST00000505315 BCO1Q9HAY6 547 aa3.97□□□□□ -1.77
HMGB1P22-201ENST00000505315 HCFC1R1Q9NWW0 138 aa3.97□□□□□ -1.77
HMGB1P22-201ENST00000505315 SIDT1Q9NXL6 827 aaKnown RBP3.97□□□□□ -1.77
HMGB1P22-201ENST00000505315 COQ3Q9NZJ6 369 aa3.97□□□□□ -1.77
HMGB1P22-201ENST00000505315 MRPL15Q9P015 296 aaKnown RBP3.97□□□□□ -1.77
HMGB1P22-201ENST00000505315 TBC1D14Q9P2M4 693 aa3.97□□□□□ -1.77
HMGB1P22-201ENST00000505315 BAG5Q9UL15 447 aa3.97□□□□□ -1.77
HMGB1P22-201ENST00000505315 CA14Q9ULX7 337 aa3.97□□□□□ -1.77
HMGB1P22-201ENST00000505315 SUFUQ9UMX1 484 aa3.97□□□□□ -1.77
HMGB1P22-201ENST00000505315 RABL2BQ9UNT1 228 aa3.97□□□□□ -1.77
HMGB1P22-201ENST00000505315 KNSTRNQ9Y448 316 aa3.97□□□□□ -1.77
HMGB1P22-201ENST00000505315 PLEKHM1Q9Y4G2 1056 aa3.97□□□□□ -1.77
HMGB1P22-201ENST00000505315 DTNAQ9Y4J8 743 aa3.97□□□□□ -1.77
HMGB1P22-201ENST00000505315 A0A0A6YYK5 440 aaPredicted RBP3.96□□□□□ -1.78
HMGB1P22-201ENST00000505315 A0A1W2PQ09 198 aa3.96□□□□□ -1.78
HMGB1P22-201ENST00000505315 A0A1W2PR48 441 aa3.96□□□□□ -1.78
HMGB1P22-201ENST00000505315 ZC3H12DA2A288 527 aaKnown RBP3.96□□□□□ -1.78
HMGB1P22-201ENST00000505315 TRIM64CA6NLI5 447 aa3.96□□□□□ -1.78
HMGB1P22-201ENST00000505315 TTC36A6NLP5 189 aa3.96□□□□□ -1.78
HMGB1P22-201ENST00000505315 SH2B2O14492 632 aaPredicted RBP3.96□□□□□ -1.78
HMGB1P22-201ENST00000505315 PCDH17O14917 1159 aa3.96□□□□□ -1.78
HMGB1P22-201ENST00000505315 DHX15O43143 795 aaKnown RBP3.96□□□□□ -1.78
HMGB1P22-201ENST00000505315 ADCY6O43306 1168 aa3.96□□□□□ -1.78
HMGB1P22-201ENST00000505315 PIAS2O75928 621 aa3.96□□□□□ -1.78
HMGB1P22-201ENST00000505315 GOSR1O95249 250 aa3.96□□□□□ -1.78
HMGB1P22-201ENST00000505315 GGPS1O95749 300 aa3.96□□□□□ -1.78
HMGB1P22-201ENST00000505315 F9P00740 461 aa3.96□□□□□ -1.78
HMGB1P22-201ENST00000505315 LRG1P02750 347 aa3.96□□□□□ -1.78
HMGB1P22-201ENST00000505315 ESR1P03372 595 aa3.96□□□□□ -1.78
HMGB1P22-201ENST00000505315 ANXA6P08133 673 aa3.96□□□□□ -1.78
HMGB1P22-201ENST00000505315 WEE2P0C1S8 567 aa3.96□□□□□ -1.78
HMGB1P22-201ENST00000505315 CKBP12277 381 aa3.96□□□□□ -1.78
HMGB1P22-201ENST00000505315 IL2RBP14784 551 aa3.96□□□□□ -1.78
HMGB1P22-201ENST00000505315 FPR1P21462 350 aa3.96□□□□□ -1.78
HMGB1P22-201ENST00000505315 TGM1P22735 817 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms